Hymenobacter sediminicola: H4317_03195
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Entry
H4317_03195 CDS
T09117
Name
(GenBank) efflux RND transporter permease subunit
KO
K18138
multidrug efflux pump
Organism
hsk
Hymenobacter sediminicola
Pathway
hsk01501
beta-Lactam resistance
hsk01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
hsk00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
H4317_03195
01503 Cationic antimicrobial peptide (CAMP) resistance
H4317_03195
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
hsk02000
]
H4317_03195
01504 Antimicrobial resistance genes [BR:
hsk01504
]
H4317_03195
Transporters [BR:
hsk02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
H4317_03195
Antimicrobial resistance genes [BR:
hsk01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
H4317_03195
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
MMPL
SecD_SecF_C
Patched
Motif
Other DBs
NCBI-ProteinID:
QNH62840
UniProt:
A0A7G7W8Z7
LinkDB
All DBs
Position
753660..756887
Genome browser
AA seq
1075 aa
AA seq
DB search
MFDIFIRRPILSLVISVFLLLLGGLALFTLPITQFPDIVPPSVTVTAKYTGANAEVCAKA
VATPLERAINGVPGMTYMSSVSSNNGVTLITVFFKVGTDPDLAAVSVQNRVTTIIDELPE
EVIKAGVTTEKEVNSMLLYLNIMSDDPKANEKFIYNFADINVLQELKRIDGVGFAEIMGS
REYSMRVWLKPDRMAAYNVGTDEVVEAIRAQNVEAAPGKSGESSGREAQVLQYVLRYTGK
LFEPEQYRNIVVRAGSDGSILRLRDVAEVEFGSLTYGMSSKIDGQPSAAIMLKQRPGSNA
SEVIDGVKNRMAELKGTSFPPGMTYSISYDVSRFLDASIHEVLRTLVEAFLLVFLIVYIF
LQDFRSTLIPALAVPVALIGTLFFMQVLGFSINLLTLFALVLAIGIVVDNAIVVVEAVHA
KMQEKHLPARAATFEAMREISSSLVAITLVMSAVFIPVSFMDGPVGVFYRQFSLTLAIAI
VISGVNAVTLTPALCAIMLRHTPLAEGEKPKSLMGRFFAGFNRRYEAMAGRYQGLLRGVA
GRRVVTLGMLLLFFGATWGVSRVLPSGFIPTEDQGMIYVNVTTPAGATVERTEQVLAQVQ
KMAQDMGPVESVSTLAGYSLVNEVAGSSYGMGMINLKPWDQRKESVQELIAELEEKTKGI
SDASIQFLPPPTVPGFGNSSGFELRLLDKSGTGDLQKTADVAQTFITALNKEGAINGAFT
GFDPNFPQYLIHVDQDMAAKKGVTIDKAMSTLQTLMGSYYASNFIRFGQMYKVMVQASPE
YRGRPEDVLTLHVKNDRGEMVPFSTFVKLERVFGPDQLTRYNMYTSAMINGDAAVGFSSG
DAISAIERVAAKELPRGYDYEWSGMTREQILSGDQALYVFGIVLIFVYLLLAAQYESLLL
PLPVLLSLPTGVFGAFLSLKLLGLENNIYAQVALVMLIGLLGKNAILIIEFAEQRRRQGA
SVLDAAIEGAVSRLRPILMTSFAFIAGLIPLVIASGAGALGNRSIGTAAAGGMLIGTLFG
MVLIPGLYVLFASLEKPKNLDADAAEAEETPAVPAPQHRLNGAAVPAGEPVHFIK
NT seq
3228 nt
NT seq
+upstream
nt +downstream
nt
atgttcgatattttcattcgccggccgattctctcgctggttatttccgtgtttctgctg
ctgctcggggggctggcgctgttcacgctgcccatcacgcagttccccgacatcgtgccg
ccttccgtgacggtgacggccaagtacacgggcgccaacgccgaggtatgcgccaaggcc
gtggccacgccgctggagcgcgccatcaacggcgtgcccggcatgacctacatgtcgtcg
gtgagctccaacaacggcgtgacgctcatcacggtgttctttaaagtcggcaccgacccc
gacctggccgccgtgagcgtgcagaaccgcgtcacgaccatcattgatgagctgccggaa
gaggtgattaaggcgggcgtcacgacggagaaagaggtgaacagcatgctgctctacctc
aacatcatgagcgacgaccccaaagccaacgagaagttcatctacaacttcgccgacatc
aacgtgctgcaggagctgaagcgtattgatggcgtgggcttcgccgaaatcatgggctcg
cgcgagtactcaatgcgggtgtggctgaagccggaccgcatggccgcctacaacgtgggc
accgacgaagtggtggaagccatccgggcccagaacgtggaagccgcgcccggcaagtcg
ggggaaagctcgggccgcgaggcgcaggtgctgcaatacgtgctgcgctacaccggcaag
ctgtttgagcccgagcagtaccgcaacattgtggtgcgcgccggctccgatggctccatt
ctgcgcctgcgcgacgtggcggaagtagaatttggctcgctcacctacggcatgtcctcg
aagattgacgggcagccctcggcggccatcatgctcaagcagcgccccggctccaacgcc
tccgaggtaatcgacggcgtgaaaaaccgcatggccgagctgaaaggcaccagcttcccg
cccggcatgacctacagcatctcctacgacgtgtcgcgcttcctcgacgcctccattcac
gaggtgctccgcacgctggtcgaggccttcctgctggtgttcctgattgtgtacatcttt
ctgcaggacttccgctccaccctgattccggcgctggccgtgcccgtggcgctgattggt
accctgtttttcatgcaggtgctgggcttctccatcaacctgctcacgctgtttgcgctg
gtgctggccatcggtattgtggtcgataacgccattgtggtggtggaggccgtgcacgcc
aaaatgcaggaaaaacacctgccggcgcgggctgccaccttcgaggccatgcgcgaaatc
agttcctcgctggtggccattacgctggtgatgtcggcggtattcatcccggtatcgttc
atggatggcccggtgggcgtgttctaccgccagttttcgctcacgctggccattgccatt
gtcatttccggcgtcaatgccgtgaccctgacgccggctctgtgtgccatcatgctccgg
cacacgccgctggccgaaggtgaaaagccgaaaagcctgatgggccgcttcttcgctggc
ttcaaccgccgctacgaagccatggccggccgctaccagggcctgctgcgcggcgtggca
gggcgccgcgtcgtcacgctgggcatgctgctgctgtttttcggggctacctggggcgtc
agccgcgtgctgccctccggcttcatcccgaccgaagaccagggcatgatttacgtgaac
gtgaccacgcccgccggcgccaccgtggaacgcaccgagcaggtgctggcccaggtgcag
aaaatggcgcaggatatgggaccagtcgagtcagtttcgacgctggccggctacagcctc
gtgaacgaagtggcgggctccagctacggtatgggcatgattaacctcaagccctgggac
cagcgcaaggagtcggttcaggagttgattgcggagctggaggagaaaaccaaaggcatc
agcgacgccagcattcagtttctgccgccgcccaccgtgcccggcttcggtaactccagt
ggcttcgagctgcgcctgctcgacaaatccggcaccggcgacctgcagaaaactgccgat
gtggcccagaccttcattacggccctcaacaaggaaggcgccatcaacggagccttcacc
ggcttcgaccccaatttcccgcagtacctcatccacgttgaccaggacatggcagccaag
aaaggcgtgaccatcgataaggccatgagcacgctacaaaccctgatgggcagctactac
gcctccaacttcatccggttcgggcagatgtataaggtgatggtgcaggcctcgcccgag
taccgcggccgccccgaggacgtgctgaccctgcacgtgaaaaacgaccggggcgagatg
gtgcctttctccactttcgtgaagctggagcgtgttttcggccccgaccagctcacgcgc
tacaacatgtacacctcggccatgatcaacggtgacgctgccgtgggcttctcctccggc
gacgccatcagcgccatcgagcgggtagcggccaaggagctgccccgcggctacgactac
gagtggagcggcatgacgcgggagcaaatcctgagcggcgaccaggcgctgtacgtgttc
ggcatcgtgctcatcttcgtgtatctgctgctggcggcccagtacgagagtctgctcttg
ccgctgccggtgctgctgagtttgcccaccggcgtgttcggagccttcctgagtttgaag
ctgctgggcctggaaaacaacatctacgcccaggtggcgctggtgatgctgataggtctg
ctgggcaaaaacgccatcctcatcatcgagtttgccgagcagcgccgccgccagggagct
tctgtgcttgatgcggctatagaaggtgccgtgtcgcgtctgcggcctatcctgatgacg
tccttcgccttcattgcgggcttgattccgctggtaattgccagcggggccggcgccctc
ggcaaccgctccatcggtacggcggcggcgggcggtatgctcatcggcacgctgttcggc
atggtcctgattccgggcctgtacgtgctgttcgccagcctagaaaagcccaaaaacctg
gatgctgacgctgcagaagccgaagaaacgcccgccgttcctgcccctcagcatcgtctc
aacggcgcggccgtgcccgccggcgaacctgttcatttcatcaaataa
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