Hymenobacter sediminicola: H4317_14535
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Entry
H4317_14535 CDS
T09117
Name
(GenBank) efflux RND transporter permease subunit
KO
K18138
multidrug efflux pump
Organism
hsk
Hymenobacter sediminicola
Pathway
hsk01501
beta-Lactam resistance
hsk01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
hsk00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
H4317_14535
01503 Cationic antimicrobial peptide (CAMP) resistance
H4317_14535
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
hsk02000
]
H4317_14535
01504 Antimicrobial resistance genes [BR:
hsk01504
]
H4317_14535
Transporters [BR:
hsk02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
H4317_14535
Antimicrobial resistance genes [BR:
hsk01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
H4317_14535
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ACR_tran
MMPL
SecD_SecF_C
Flavin_Reduct
Motif
Other DBs
NCBI-ProteinID:
QNH61369
UniProt:
A0A7G7W4S6
LinkDB
All DBs
Position
3399911..3403000
Genome browser
AA seq
1029 aa
AA seq
DB search
MSLSSTSINRPVLAIVMSLVIVIFGVIGFRYLSIREYPSVDPPIITVSASYTGASADVMQ
GQVTEPLEEALNGIAGIKNLTSNSRDGRTQITVEFDLDADLETAANDVRDKVSGAQGRLP
RDIDPPIVSKANADSQPIVMTYLSSSQRNLLELTDYANNTLKERIQTIPGVSEVRVYGER
KYSMRLWLDPVKLSALGVAPVEVQSALTRENVELPSGAVQGENTQLTLRTMGRLSTVEDF
NNLIIRKDANSLVRLSDIGYAELYPENDQTIFKVNGVPMVGLAVIPQPGSNQIDIADEFN
KRLEQYGKDLPKDLVLKPGFDNSVFIRKSINEVEHTIIEAFVLVVVIIFLFLRDWRSTLI
PVVAIPVSLVGIFFVMYLLDFSINVLTLLAIVLAIGLVVDDAIVVLENIYSRIEEGEDPK
TAAIKGSEEILMAVISTTVVLAAVFLPVVFLTGITGRLFREFGIVVAGSVLISAFVSLTL
TPMMCSVLLKREEKHNWFYRKTEPFFVSMIGGYQSSLKTFLNNRWLAWVVVLGTGVGIWF
FMKTIPSELAPVEDRSRVNVNATGPEGASFEFMDAYMAQITKMAIDSTGDNLSSVFAVTS
PGFGGGSNSGTARVLLVEADKREKNQDDVAKALTAGVKNLTAARTSVSQDQSIGGGGGGG
GGLPVQFVVQTQDFEKLRAAVPKFLDAARQDPTFQFVDVNLKFNKPELRINIDREKAQSL
GVSVQSISQTLQAGLSGQRYGYFIRGSKQYQIIGQVAREDRNQPLDVRLLSVKNADGQLV
QLDNVIRLTESSTPPQLYRFNRYNSATFSASLSPGKTLGDGIAAMQAIADKQLDETFSTE
LSGASRDFQESSSSLVFAFGLALVLIYLVLAAQFESFRDPVIIMVTVPLALSGALLSLWY
FNQTLNLFSQIGIIMLIGLVTKNGILIVEFANQQVEQGKDYMTGLIEGATARFRPILMTS
LCAILGILPIAIATGAGALSRRAMGIGVVGGLFFATGLTLYVVPVMYSYFATAKKHSQKQ
EKKAKAVAA
NT seq
3090 nt
NT seq
+upstream
nt +downstream
nt
atgagcttatcctccaccagtatcaaccgcccggtcctcgccatcgtgatgagcctcgtc
atcgtgattttcggcgtgattgggtttcgttacctcagcatccgggaatacccgagcgta
gacccgcccatcattacggtgtcggcgagctataccggtgcctcggctgatgtaatgcag
ggccaggtaactgagccgctcgaagaagcgctgaacggcattgccggcatcaagaatcta
acctcgaactcgcgcgacggccgcacccagattacggtagagtttgacctcgacgccgac
ctggaaaccgcggccaacgacgtgcgcgacaaggtttcgggcgcgcagggtcgccttccg
cgcgacatcgacccgcccatcgtgagcaaggccaatgccgactctcagccgattgtgatg
acttacctcagcagttcgcagcgcaatctgctcgagctgactgattacgccaacaacacc
ctcaaagagcgaattcaaaccattccgggcgtgtcggaagtgcgggtatatggcgagcgg
aaatattccatgcgcctgtggctcgaccccgtgaagctgtcggcgctgggcgtggctccg
gtggaggtgcaaagcgccctgacccgcgaaaacgtggagctgcccagcggtgccgtgcag
ggcgaaaacacccagcttacgctgcgcaccatgggccgcctgtccaccgtcgaagacttc
aacaacctcattatccgtaaggacgccaattcgttagtgcgcctctccgacattggctac
gccgaactgtatcctgaaaacgaccaaaccatctttaaggtaaatggtgtgccgatggta
ggcctggccgtcattccgcagccgggctccaaccagattgatattgccgacgagttcaac
aaacgcctggagcagtacggcaaggacttgcccaaagacttggtgctgaagccgggcttc
gacaactcggtgtttatccgcaagtccatcaacgaggtagagcacaccatcatcgaagcc
ttcgtgctggtggtggttatcatcttcctattcctgcgcgactggcgttccacactgatt
ccggtagtagccattcccgtgtcactggtgggtattttcttcgtgatgtacctactggac
ttctccatcaacgtgctgacgttgctggccatcgtgctggccatcggcctggtggtagat
gacgccattgtggtgctagaaaacatctactcgcgcatcgaggaaggcgaagaccctaag
acggccgctattaaaggttccgaagaaatcctgatggcggttatcagtaccacggtggta
ctggcggcggtgttcctgccggtggtattcctgaccggtattaccgggcgtctgttccgc
gagtttggcattgtggtggccggctcggtactgatttcggccttcgtttcgctcacgctt
acgcccatgatgtgcagcgtgctgctcaagcgggaggaaaagcacaactggttttaccgc
aaaactgagccatttttcgtgagcatgattggcggctaccaaagcagcctcaaaaccttc
ctgaacaaccgttggctggcttgggtggtcgtgctgggcaccggcgtaggcatctggttt
ttcatgaagacaattccttcggagctggctccggtggaagaccgcagccgggtcaacgtc
aatgctaccggccctgaaggcgcttcgtttgagtttatggatgcctacatggcccagata
acgaagatggccatagactcgaccggcgacaatctgagcagtgtgtttgctgtgacgtcg
ccgggcttcggcggcggctctaactccggtacggcccgcgtgctgctggtagaagccgac
aagcgcgaaaagaaccaagacgatgtagcgaaggctctcacggcaggagtcaagaacctg
acggctgcgcgtacctcggtgtcgcaagaccagagcatcggcggcggcggtggtggcggc
ggcggactgccggtacagtttgtggtgcagacgcaggactttgaaaagctgcgagcagcc
gtaccgaaattcctggacgccgcccgccaggaccccacgttccagttcgtggacgtcaac
ctgaaattcaataagcccgagctgcgcatcaatattgaccgggaaaaagcacagagcctg
ggcgtgagtgtgcagagcatcagccagacgctgcaggcgggcctgagcggccagcgctac
ggctacttcatccggggcagcaagcagtaccagattatcgggcaggtggcccgcgaagac
cgcaaccagccgctggacgtgcgcctgctctccgtgaaaaacgcagacggccagctcgtg
cagctcgacaacgtgattcggcttacggaaagcagcacgccgccccaactctaccgtttc
aaccgctacaactcggctactttctcggcttccctgtcgcctggcaaaaccctcggcgac
ggtattgcggccatgcaggctattgccgacaagcaactcgacgaaacattctctactgaa
ctctccggtgcttcccgcgacttccaggaaagctcttcatcgttggtgtttgccttcggg
ctggctttggtgctgatttatctggtgctggcggcgcagttcgagagcttccgcgacccg
gtcatcatcatggtgacggtaccactggcattgagtggcgcgctgctaagtctgtggtat
ttcaatcaaaccctcaacctgttctcgcagattggcatcatcatgctcattgggctggtg
acgaaaaacggtattctgattgtggagtttgccaaccagcaggtagagcagggcaaggat
tacatgactggcctgattgagggcgccacggcccgcttccgccccatcctgatgacgtcc
ttgtgcgctattctgggtattctgcccattgccattgccaccggggcaggcgccctcagc
cgccgcgctatgggcatcggggtagtaggtgggctgtttttcgctacgggcctcacgctc
tacgtagtgcccgtaatgtactcttacttcgccaccgcaaaaaagcatagccagaaacag
gagaagaaagccaaggccgtagctgcctag
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