Hymenobacter sediminicola: H4317_17130
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Entry
H4317_17130 CDS
T09117
Symbol
nth
Name
(GenBank) endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
hsk
Hymenobacter sediminicola
Pathway
hsk03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
hsk00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
H4317_17130 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hsk03400
]
H4317_17130 (nth)
Enzymes [BR:
hsk01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
H4317_17130 (nth)
DNA repair and recombination proteins [BR:
hsk03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
H4317_17130 (nth)
Prokaryotic type
H4317_17130 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
EndIII_4Fe-2S
HHH_5
RecR_HhH
HHH_8
Cdd1
DUF2400
HHH_3
Motif
Other DBs
NCBI-ProteinID:
QNH61849
UniProt:
A0A7G7W656
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All DBs
Position
4002772..4003491
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AA seq
239 aa
AA seq
DB search
MRKSERYRRFLEYFTTNFPQPETELHYRNPYELIVAVVLSAQCTDKRVNQVMPALLEQFP
TPEQLAAATADDIFPFIRSVSYPNNKAKHLAGLGRMLLADFGGEVPSSIEELQRLPGVGR
KTANVVVSVIYNQPAMAVDTHVFRVSHRLGLVARTATTPLAVEKELVQHIPQDLIPKAHH
WLILHGRYICVARQPKCAICPLTEWCKYYAEVVAKQITPNAKPASASLNAENKQAPSTT
NT seq
720 nt
NT seq
+upstream
nt +downstream
nt
atgcggaagtccgagcgttaccgtcgctttctggaatatttcacgaccaatttcccgcag
ccggaaacggagttgcattaccgcaacccctacgaactgattgtggcggtagtactaagc
gcgcagtgtacggataagcgcgtaaatcaagtaatgcctgccctcctggagcaattcccg
acgcctgagcaactggctgcagccacagccgacgacattttcccgttcattcgcagcgtt
tcctaccctaataataaagccaagcacctagctgggcttggacgcatgctcttggctgat
tttggcggcgaagtacctagcagcatcgaggaactgcaacggctacctggcgtagggcgc
aagacggccaacgtagttgtttcggtgatttataatcagcccgctatggccgtggatacg
cacgtgtttcgggtttcgcaccggttaggactggtggcccgtacggctactacgccattg
gctgttgaaaaggaattggtgcagcatatcccgcaggatcttattccgaaagcgcaccac
tggctgattttacatggccgctacatttgtgtagctcgccaacccaaatgcgccatttgt
ccactcactgagtggtgcaaatactacgctgaggtagttgccaaacaaatcaccccgaat
gcaaaacctgcttcagcaagccttaatgcagaaaataaacaggcacctagtacaacttag
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