Histophilus somni 129PT: HS_1065
Help
Entry
HS_1065 CDS
T00386
Symbol
nth
Name
(GenBank) DNA-(apurinic or apyrimidinic site) lyase
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
hso
Histophilus somni 129PT
Pathway
hso03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
hso00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
HS_1065 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hso03400
]
HS_1065 (nth)
Enzymes [BR:
hso01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
HS_1065 (nth)
DNA repair and recombination proteins [BR:
hso03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
HS_1065 (nth)
Prokaryotic type
HS_1065 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
EndIII_4Fe-2S
Ogg-HhH
RecR_HhH
Motif
Other DBs
NCBI-ProteinID:
ABI25340
UniProt:
Q0I481
LinkDB
All DBs
Position
1178959..1179594
Genome browser
AA seq
211 aa
AA seq
DB search
MNKQKRIEILTRLRDQNPHPTTELHFNTPFELLIAVILSAQATDKGVNKATDKLFPLANT
PQAILDLGLDELKKYIKTIGLYNSKAENIIKTCRDLIEKHNGQVPENREALEALAGVGRK
TANVVLNTAFGHPTIAVDTHIFRVSNRTGFAPGKDVIKVEEKLLKVVPSEFKVDVHHWLI
LHGRYTCIARKPRCGSCIIEDLCEFKEKTEI
NT seq
636 nt
NT seq
+upstream
nt +downstream
nt
atgaataaacaaaaacgtatcgaaatattaactcgtctgcgtgatcaaaatccgcacccc
acaactgaattgcattttaatacgccttttgaattacttattgcagtcattctctctgca
caagcaacagataaaggagtaaataaagcaacggataaactttttcctttagctaatacc
ccacaagccattttagatcttggtttggatgagttaaaaaaatatataaaaacgattggg
ttatacaatagtaaagctgaaaatattattaaaacttgccgtgatttaattgaaaagcac
aatggtcaagttccggaaaatcgagaagcattggaagcactggcaggcgtaggcagaaaa
acggctaatgttgttcttaatacagcttttggtcatcctactattgccgttgacacacat
attttccgagtgtctaatcgtacgggatttgctcccggaaaagatgtcataaaagtagaa
gaaaaattattgaaagttgtaccatcagagtttaaagtggatgtacaccactggttaatt
ttacatggtcgctatacttgcattgcaagaaaaccgagatgtggctcttgtattattgaa
gacttatgtgaatttaaagaaaaaacagagatttaa
DBGET
integrated database retrieval system
