Hippoglossus stenolepis (Pacific halibut): 118097970
Help
Entry
118097970 CDS
T08308
Symbol
nod2
Name
(RefSeq) nucleotide-binding oligomerization domain-containing protein 2
KO
K10165
nucleotide-binding oligomerization domain-containing protein 2
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Pathway
hsp04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
118097970 (nod2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
hsp04054
]
118097970 (nod2)
Pattern recognition receptors [BR:
hsp04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
118097970 (nod2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NACHT
NLRC4_HD2
CARD
LRR_6
NOD2_WH
LRR_4
T3RM_EcoP15I_C
AAA_16
Motif
Other DBs
NCBI-GeneID:
118097970
NCBI-ProteinID:
XP_035010193
LinkDB
All DBs
Position
1:complement(23870251..23876493)
Genome browser
AA seq
1002 aa
AA seq
DB search
MTGWDTGGSRCSESMFARELVLKQRTEILHALCSSGSAELLERVLDLLLAQGELVWEEYQ
NVQVPGRALYTNARHLLDLVYTKGVDTCEIFLAAFKQVVPERQGADLPSSGCCLDLEKKD
ESQITATHTLLIDRPSLVSKLQDCIDGALEALTVSGNFTSADCDDVQLPIHTPSQQARRL
LDHVRSKGESAAKVVLHYIQQQGSGASRTQEKLTPPKEFQKYQKKLSSSVSAQSCFLSTY
GGTSHMSLDEIYTEGQLELAHDCADPHGPLDLEDIIGAAGTVNEEADTVLVSGEAGRGKS
ILLQRLHLLWARGAALQDFLLLFPFSCRRLNSEQRELSVQELLFQHCCWPDKEQEEIFQF
ILDHPHLTLFTFDGLDELKQSFSDDHRLCCPTQRAPVHILLFNLMQGSLMKGVWKVVTSR
PEAVGPLLRKHLRKEVFLKGFSPSGINCFVKKHHSDPTVAAKVLESLQTNTALLGLCHSP
VLCWIVSQCHKELLGCGEGSLQTITDVYMMILQHFLQRRSTLKNAMGSGWLQEHLKTVLH
LGQLAFDGIGTTCYIFSCTDLKTCGVTEKDISLGFLIRSKDMSAANSKHYEFLHVTMQCF
FAALYIVLSSNTDRATIPKLFELQDMRETSQKGKCFMACLPTTAQQEQTQGTKASAAETT
NLQITATFVSGLLSPHHRSLWLYCCPRSVMEKKIKQVSRCLSKGMQKHFKSISQPVAGEK
KSMHAMPGFVWLIKCIYEMQESRIAKDAINKLDVDHLKLTYCDIGPVECTALAYVLQHLR
NPVGLQLDNNSVGDVGVEQLLPCMHMCSSLYLRNNNITDQGICKLIAKVIQCENFQKIAL
FNNKLTDACTQHFSLLLKTKQDFLCLRLGNNNITAEGAKQLAEGLKVNHSLQYLGLWGNK
IGDEGAEAMARALENSRSLIWFSLVGNGVGNAGACALANIIKNSSSLEELWLTENCITRT
GVECLIQALEHNTHVKSIWLRNNDLSSEEEEEMTQRESRLVF
NT seq
3009 nt
NT seq
+upstream
nt +downstream
nt
atgacaggttgggataccggaggcagcagatgttcagaaagcatgtttgcccgggagctt
gtgctgaaacaacggacagagatactgcatgcactgtgcagcagtggctcagctgaactt
ctggaaagagttctggatctactgctggcccagggggagctcgtgtgggaggaataccag
aatgtacaggtaccgggtagagctctgtataccaatgcccgacacttgctcgacctggtt
tacacgaagggtgtggacacctgtgaaatcttcctcgcagctttcaaacaagttgtgcca
gaaaggcagggggctgacctcccctcctcaggatgctgtttagatctcgaaaagaaagac
gaatctcagatcacagcgacccacacccttttgattgatagaccgagcctcgtcagcaag
ctacaagactgcattgacggtgctctagaggctctgactgtgtcaggaaacttcacctca
gcagactgtgatgacgtacagcttcctatacacaccccctctcagcaggcaaggcgtttg
cttgatcatgtccgatcaaagggcgagtcagcggcaaaggtggtactgcattatattcag
cagcagggatctggagcatcacggacccaagagaaactgacaccaccgaaagagttccag
aagtaccagaagaagctgagcagttccgtgtcggcccagtcctgttttctcagtacttat
ggagggactagccacatgtccttggatgaaatctacactgagggccagctggaattagct
catgactgtgctgatccacatggacctttggacttggaggacataatcggtgcagcgggt
acagttaacgaggaggctgatacggtgctggtgtctggtgaggcaggcagagggaagagc
atcctactccagaggctgcacttgctctgggctcgtggggcagccctccaggacttcctt
ctcctgttcccattcagctgtcgcaggttgaactcagagcagcgtgaactgtctgtccaa
gagttgctgtttcagcattgctgctggccagacaaggagcaggaggagattttccagttc
atcctggaccacccacatctcaccctcttcacttttgatggcctggatgagctcaagcag
agcttttcagacgatcacaggctctgctgccccacccagcgtgcacctgttcacatacta
ttattcaacctaatgcaaggatcactaatgaagggggtgtggaaagtggtaactagtcgt
ccagaggcagtggggcctttgctgagaaaacaccttcgcaaagaggtctttctgaaaggt
ttttccccaagtgggattaattgttttgtgaagaagcatcacagtgacccaactgtggct
gctaaggttttggagtccctgcagacaaacacagctttacttggactgtgtcatagtcca
gtcctctgctggattgtgtcacagtgccataaggagttgctgggctgtggagagggtagt
ctacaaacaatcacagacgtttacatgatgatcttgcagcactttttacagcgccgaagc
accctgaagaacgccatggggtcaggttggcttcaggagcacctaaaaacagtcttgcat
ctaggacagcttgcgtttgatgggataggaaccacctgttatatcttctcatgtacagat
ctgaagacatgcggtgtaactgaaaaggatatctctctgggctttctcattcgaagcaaa
gatatgtccgctgccaacagtaaacactatgaattccttcatgtgactatgcagtgtttc
tttgctgctctgtacattgttttgtcaagtaacactgaccgtgcaactatccccaagctc
ttcgagctgcaggacatgagagagacaagtcagaagggcaaatgcttcatggcctgcttg
cccaccactgcccaacaagagcagactcaagggacaaaagcttcagcagccgaaacaaca
aatcttcaaatcacggccacctttgtgtctggattactttccccgcaccatcgaagcctg
tggctctactgctgtcccaggtctgtgatggaaaaaaagatcaaacaggtttcgagatgc
ctgtccaaagggatgcagaaacactttaagtctatctctcaacctgtagcaggggagaaa
aagagcatgcacgccatgccgggctttgtctggcttatcaaatgcatctatgagatgcag
gagagcagaattgccaaagatgctatcaataagctagatgtagaccacctgaaactgacc
tactgtgacattggtcctgtagagtgcactgcactggcctatgtactccagcacttaagg
aaccctgtcggcctccagctggacaacaactctgtaggtgatgttggagtggagcagctt
cttccctgcatgcatatgtgtagttccctgtacctcagaaataacaacatcacagatcag
ggcatctgcaaactgatcgctaaagttatccagtgtgaaaacttccagaaaattgcgctc
ttcaacaacaagttaactgatgcctgcactcagcacttttctcttcttctgaagaccaag
caagatttcctctgtctaaggctgggcaacaacaatataacagcagaaggagcaaagcag
cttgcagaggggctgaaagtcaatcattcacttcaatatttagggctttggggcaataag
ataggtgatgaaggagcagaggccatggccagagcactagagaacagtcgatctctgatt
tggtttagcctggtaggtaatggtgtagggaatgcaggcgcgtgtgccctcgccaacatt
atcaagaacagctcgtcactggaagagctttggctgacagaaaactgcataaccagaaca
ggagtggaatgtctgattcaagccctggaacacaatacacatgtgaaatcaatatggttg
agaaacaatgacctcagttcggaggaggaggaagagatgacacaacgtgaatcgagactg
gttttctga
DBGET
integrated database retrieval system
