Hippoglossus stenolepis (Pacific halibut): 118100539
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Entry
118100539 CDS
T08308
Symbol
acta2
Name
(RefSeq) actin, aortic smooth muscle
KO
K12313
actin, aortic smooth muscle
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Pathway
hsp04270
Vascular smooth muscle contraction
hsp04371
Apelin signaling pathway
hsp04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09130 Environmental Information Processing
09132 Signal transduction
04371 Apelin signaling pathway
118100539 (acta2)
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
118100539 (acta2)
09150 Organismal Systems
09153 Circulatory system
04270 Vascular smooth muscle contraction
118100539 (acta2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
hsp04812
]
118100539 (acta2)
04147 Exosome [BR:
hsp04147
]
118100539 (acta2)
Cytoskeleton proteins [BR:
hsp04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actins
Actins
118100539 (acta2)
Exosome [BR:
hsp04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
118100539 (acta2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Actin
Motif
Other DBs
NCBI-GeneID:
118100539
NCBI-ProteinID:
XP_035001653
LinkDB
All DBs
Position
21:complement(20387768..20394030)
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AA seq
377 aa
AA seq
DB search
MCDDEESTALVCDNGSGLCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEA
QSKRGILTLKYPIEHGIITNWDDMEKIWHHSFYNELRVAPEEHPTLLTEAPLNPKANREK
MTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHNVPIYEGYALPHAIMRL
DLAGRDLTDYLMKILTERGYSFVTTAEREIVRDIKEKLCYVALDFENEMGTAATSSSLEK
SYELPDGQVITIGNERFRCPETLFQPSFIGMESAGIHETTYNSIMKCDIDIRKDLYANNV
LSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWIS
KQEYDEAGPSIVHRKCF
NT seq
1134 nt
NT seq
+upstream
nt +downstream
nt
atgtgtgatgatgaggagagcaccgctctggtctgtgataatggatccggcctctgtaag
gcggggttcgccggagacgacgcccccagggccgtcttcccctccatcgtgggccggccc
aggcaccagggcgtgatggtgggaatggggcagaaggacagttacgttggagacgaggct
cagagtaagagaggaatcctcaccctgaaatatcccatcgaacacggaatcatcaccaac
tgggacgacatggagaagatctggcatcactcgttctacaacgagctgcgagtggctcca
gaggaacatcccactctgctgacggaggctccgctcaacccgaaggccaacagggagaaa
atgacccagatcatgtttgagaccttcaacgttcctgccatgtatgtggccatccaggcc
gtcctgtcactgtacgcctccggaagaaccacaggtatcgtcctggactcaggtgacggc
gtcacccacaacgtgccgatctacgagggttacgctctgcctcatgccatcatgaggttg
gacctggcgggacgtgacctgaccgactacctcatgaagatcctgacggagcgaggctac
agcttcgtcaccaccgcggagagagagatcgtccgagacatcaaagagaagctgtgctac
gtcgctctggactttgagaacgagatggggacggcagcgacctcgtcctctctggagaag
agctacgaacttcctgacggtcaggtcatcaccatcggcaacgagaggttccgctgcccc
gagacgctctttcagccgtccttcattggtatggagtcagctgggatccatgagacgacg
tacaacagcatcatgaagtgtgacatcgacatccgtaaagatttgtacgccaacaacgtc
ctgtccggaggaaccaccatgtacccggggatcgccgaccgcatgcagaaggagatcacc
gcgctggcgcccagcaccatgaagatcaagatcatcgccccccctgagaggaagtactcg
gtgtggatcggcggctccatcctggcgtcgctctccaccttccagcagatgtggatcagt
aagcaggagtatgacgaggccggaccatccatcgtccaccgcaagtgcttctag
DBGET
integrated database retrieval system
