Hippoglossus stenolepis (Pacific halibut): 118102445
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Entry
118102445 CDS
T08308
Symbol
rela
Name
(RefSeq) transcription factor p65 isoform X1
KO
K04735
transcription factor p65
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Pathway
hsp04010
MAPK signaling pathway
hsp04137
Mitophagy - animal
hsp04210
Apoptosis
hsp04218
Cellular senescence
hsp04620
Toll-like receptor signaling pathway
hsp04621
NOD-like receptor signaling pathway
hsp04622
RIG-I-like receptor signaling pathway
hsp04623
Cytosolic DNA-sensing pathway
hsp04625
C-type lectin receptor signaling pathway
hsp04920
Adipocytokine signaling pathway
hsp05132
Salmonella infection
hsp05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
118102445 (rela)
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
118102445 (rela)
09143 Cell growth and death
04210 Apoptosis
118102445 (rela)
04218 Cellular senescence
118102445 (rela)
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
118102445 (rela)
04621 NOD-like receptor signaling pathway
118102445 (rela)
04622 RIG-I-like receptor signaling pathway
118102445 (rela)
04623 Cytosolic DNA-sensing pathway
118102445 (rela)
04625 C-type lectin receptor signaling pathway
118102445 (rela)
09152 Endocrine system
04920 Adipocytokine signaling pathway
118102445 (rela)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
118102445 (rela)
09171 Infectious disease: bacterial
05132 Salmonella infection
118102445 (rela)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
hsp03000
]
118102445 (rela)
Transcription factors [BR:
hsp03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
RHR (Rel homology region) Rel/Ankyrin
118102445 (rela)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RHD_DNA_bind
RHD_dimer
Motif
Other DBs
NCBI-GeneID:
118102445
NCBI-ProteinID:
XP_035004517
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All DBs
Position
23:complement(13226731..13239464)
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AA seq
641 aa
AA seq
DB search
MEVYRWDMTTLNPGSSSSSLPFMPPASVPTAGPFIEIIEQPKPRGMRFRYKCEGRSAGSI
PGEKSNDTTKTHPAIKVHNYSGPLRVRISLVTKNAPHKPHPHELVGKDCKHGYYEADLQE
RRIHSFQNLGIQCVKKKDVTEAITCRLQTNNNPFNIPDAKVWEEEFDLNSVRLCLQASIT
LSTGEQFPLEPVVSQPIYDNRAPNTAELKICRVNRNSGSCKGGDEIFLLCDKVQKEDIEV
RFFQDSWEGKGTFSQADVHRQVAIVFRTPPYRDSNLTEPIRVKMQLRRPSDREVSEPMDF
QYLPSDPDEYRLTEKRKRTGDMFQSLKLGPMLSSVSIPQDRRHISTARRTVTAKPPSMNA
QAAAVVPSGASAGKSQPSYLFNQPGQLFTVQPKVEASPSISAVTTSQTWKIMESLSLGNQ
PKATLVANFSMSQPQSSSTSTTTSAANPDYSTVNLSDLHEFFPNISSAMAQEPSASLGST
ASSQANSSYTLQSSHFRVDAPLDDDIPEFPSFSEAQAPGTLDSLNMDDFVDLLNPRLMSE
IGNCTSMLAQASCQQVAPSSSSTVAQNTSDPASNPGSTWMNYPNSIVTLLQNEGSNVASN
NIHHQVPVLDELDELMSADEDRLISILNSESHVGFVTGHPS
NT seq
1926 nt
NT seq
+upstream
nt +downstream
nt
atggaggtgtatagatgggacatgacgacactcaacccaggttcttcttcttcctctctt
cctttcatgcctcctgcgtctgtcccaacagcaggccccttcatagagattattgagcag
ccaaagccaaggggcatgaggttcaggtataagtgtgaaggacgttcagccggcagcatc
cccggagagaagagcaacgacaccactaagactcacccagccatcaaggtgcacaactac
agcggccccttgcgtgtgcgcatttcgctggtgacaaagaatgcgccgcacaagcctcac
ccccacgaactggtcgggaaggactgcaaacatggctactacgaggctgacctgcaggag
agacgaatacacagttttcagaacctgggcatacagtgtgtgaagaagaaggatgtgact
gaggccatcacttgcaggctgcagaccaataataaccccttcaacattccagacgcgaag
gtttgggaagaggagtttgacctgaattcagtgcggctttgcttgcaggcctccatcact
ctgtctacaggggagcagtttcctttggagcctgtggtgtcgcagcccatttacgacaac
agagccccaaacacagctgagctgaagatctgcagagtcaaccgcaactctggaagctgc
aagggaggggacgaaatctttctgttgtgtgacaaagtgcaaaaagaggacatcgaggtg
cgtttcttccaggactcttgggagggaaagggcactttctcccaggccgacgtccacagg
caggtggccatcgtgttccgcacacctccctatcgcgactctaatctcaccgagcccatc
agagtgaagatgcagctccgccggccctctgatcgcgaggtcagcgagccaatggacttc
cagtacctgccttctgacccagatgaatacagactgactgagaagaggaagcgcacagga
gacatgttccagagcctgaagctgggacccatgttgtctagtgtgtccattccacaagat
agacggcacataagcacagcacggagaacagtcactgccaagcctccgtctatgaacgca
caagctgcagctgtggtgccctctggtgccagtgcagggaaatctcagccctcctactta
ttcaatcagccgggtcagctcttcacagtccagcccaaggtagaggcctccccctccatc
tcagctgtgactacaagccaaacatggaagatcatggagagcctgagcctgggcaaccag
cccaaagccacactagtggccaacttctcaatgagccagccacaatcttcctccacctct
accaccacctccgctgccaacccggactactcaactgtaaacctgtctgatctgcatgaa
ttcttccccaacatttcctccgccatggcccaggagccttccgcttctctgggtagcacg
gcgtcctcgcaggccaacagctcctataccctccagagctctcatttccgtgtggacgca
ccactggatgatgatattccagagttccctagcttttctgaagctcaggccccaggcacc
ctggacagcctaaacatggatgactttgtggaccttctgaacccccgcctcatgagcgag
attggaaattgcacctcgatgttggctcaggcttcatgccaacaggtggccccttccagc
tcctccactgttgcccagaacacttctgaccccgccagcaacccaggaagcacttggatg
aattaccccaacagcatcgtcaccctgctccagaacgagggctcaaatgtcgcatccaac
aacatccaccatcaagttcctgtactggatgagttggatgagttgatgtccgctgacgag
gatcgtcttatttccattctcaacagcgaaagccatgttgggtttgtgacaggacacccc
agttaa
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