Hippoglossus stenolepis (Pacific halibut): 118102891
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Entry
118102891 CDS
T08308
Symbol
plod3
Name
(RefSeq) LOW QUALITY PROTEIN: multifunctional procollagen lysine hydroxylase and glycosyltransferase LH3
KO
K13646
lysyl hydroxylase/galactosyltransferase/glucosyltransferase [EC:
1.14.11.4
2.4.1.50
2.4.1.66
]
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Pathway
hsp00310
Lysine degradation
hsp00514
Other types of O-glycan biosynthesis
hsp01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
118102891 (plod3)
09107 Glycan biosynthesis and metabolism
00514 Other types of O-glycan biosynthesis
118102891 (plod3)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
hsp01003
]
118102891 (plod3)
Enzymes [BR:
hsp01000
]
1. Oxidoreductases
1.14 Acting on paired donors, with incorporation or reduction of molecular oxygen
1.14.11 With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
1.14.11.4 procollagen-lysine 5-dioxygenase
118102891 (plod3)
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.50 procollagen galactosyltransferase
118102891 (plod3)
2.4.1.66 procollagen glucosyltransferase
118102891 (plod3)
Glycosyltransferases [BR:
hsp01003
]
O-Glycan biosynthesis
O-linked Gal type
118102891 (plod3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
2OG-FeII_Oxy
Anp1
2OG-FeII_Oxy_3
DUF6492
DUF2738
Motif
Other DBs
NCBI-GeneID:
118102891
NCBI-ProteinID:
XP_035005371
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Position
23:complement(3469593..3478412)
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AA seq
734 aa
AA seq
DB search
MFPRRRLLSLLPLFLLQSFVSADQRSPSAENLLVITAATEETDGFNRFMGTIREFNYTVK
VLGLGEEWKGGDVARTVGGGQKVRWLKKELLKHSDKTNMVIMFVDSYDVIFAAGPEELLS
KFKRLGHRVVFSAEGFCWPDQRLAQKYPVVHSGKRYLNSGGFIGFAPDLSAIVQQWKSKD
SDDDQLFYTKIYLDKTQRTKFNMSLDHRSRIFQNLNGAVDEVVLKFEKAKVRARNVAYDT
LPVVIHGNGPTKLQLNYLGNYVPTAWTYESGCGICDDDLLFYNDVPGEEMPLVHVAVFIE
HATPFMEEFLDRLTTLNYPMARIHLFIHNNVVYHERHIQRFWERHRSLFPNARLVGPEEN
LQEDKARTMAVEACKKDPECDYYFSIDSDVALTNPDTLRILIEENKSVIAPMLSKHGKLW
SNFWGALSPEGYYSRSEDYIEIVQGKRIGLWNVPYITQAYLIKGSVLRSKLSKMTMYVGE
GMDPDMVFCKSIRDQGIFMFVSNRDEFGRLVASANFNTSRLHPDMWQIFDNPVDWKEKYI
NVNYSKIFEDDKKFVEQPCPDVYWFPAFSEKMCDHLVETMEDNNEWSGGKHNDERLAGGY
ENVPTVDIHMNQIGFEKEWLKFLKEYIAPVTEKLYPGYFPKCQAIMNFVVRYRPDEQPSL
RPHHDSSTFTINVALNSKDIDYEGGGCRFLRYDCKVESPRKGWTFMHPGRLTHYHEGLPT
TRGTRYIMVSFVDP
NT seq
2205 nt
NT seq
+upstream
nt +downstream
nt
atgtttccccgccgccgcctcctcagtctgctgccgctcttcctcctccagagcttcgtg
tccgccgatcagcggagcccctctgcagaaaatctgctggtgatcaccgcggcaacagag
gagacagacggcttcaatcgcttcatgggtacgatcagggagttcaactacaccgtgaag
gtgctgggtctgggggaggagtggaagggaggtgacgttgctcgcacagtgggtggaggt
cagaaggtcagatggttgaagaaggagcttctcaaacactctgacaagacaaacatggtc
atcatgttcgtggacagttacgacgtcatctttgcggcgggcccggaggagctgctctcc
aaattcaaacgtctaggtcatcgagtggttttctcagccgagggattctgctggcccgac
cagagactggcccaaaagtaccctgtggtgcattctgggaaacgctacctcaactcagga
ggtttcatcggcttcgctccagatctcagtgcaatcgttcagcagtggaagagcaaggac
agcgatgacgaccagctcttctacaccaagatctacctggacaagacgcagcggaccaag
ttcaacatgtcgctggatcatcgatccagaatcttccagaatctgaacggagccgtcgat
gaagtcgtcttgaagtttgagaaggcaaaggtcagagcgaggaacgttgcctacgacaca
ctccctgttgtcatccatggcaacggacccaccaagctgcagttgaattaccttggtaac
tatgtcccgacggcgtggacctatgagagcggatgtggcatctgtgacgacgacctgctt
ttctataacgacgttcctggagaggagatgcctctggttcacgttgccgtgtttatcgaa
cacgccactcccttcatggaggagttcctagaccgactgaccacgctcaactatcccatg
gcgaggatccacctcttcatccacaacaacgtcgtttaccacgagcgtcacattcagaga
ttctgggagcgccacaggtcgctgttccccaacgcccggctggttggtccagaggagaac
ctgcaggaagacaaggccagaaccatggctgtcgaggcgtgtaagaaggatccagagtgt
gattattacttcagcatcgactctgacgtggcgttgacgaaccccgacacactgaggata
ctgatcgaggaaaacaaatctgtcatcgctcccatgttgtcaaaacacgggaagctgtgg
agtaacttctggggcgctctgagtcctgaaggatactactcaagatctgaagactacatc
gagatcgtccagggaaagaggatcggtctgtggaacgtgccgtacatcactcaggcctac
ctgatcaaaggcagcgtgctgcggtctaaactgtccaagatgactatgtacgtgggcgag
gggatggaccctgacatggtgttctgcaagagcatcagagaccagggcatcttcatgttc
gtgtcaaaccgcgacgagtttggtcgtctggtggcatcggccaacttcaacacgtccagg
ctgcacccggacatgtggcagatcttcgacaaccctgtggactggaaggagaagtacatc
aacgtgaactactccaagatcttcgaagatgataagaagttcgtggagcagccctgtcca
gatgtttactggtttccagctttctcagagaagatgtgtgaccacctggtggagaccatg
gaggataacaacgagtggtctggaggaaaacacaatgacgagcgtctggccggcggctac
gaaaacgtcccgacggtggatattcacatgaaccagatcggctttgagaaggagtggctc
aaattcctcaaggaatacatcgccccggtcactgaaaaactctatcccggatatttcccc
aagtgccaggccattatgaactttgtggtccgttaccgccctgacgagcagccgtctctg
cgaccgcatcacgactcgtccaccttcaccatcaatgttgccctgaacagcaaggacatc
gactacgagggtggaggctgcaggttcctgcgttacgactgtaaggtggagtctcccagg
aagggctggaccttcatgcaccccgggcgtctgacccactaccacgagggtctgcccacc
acgagagggaccagatacatcatggtgtccttcgttgacccctga
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