KEGG   Hippoglossus stenolepis (Pacific halibut): 118103061
Entry
118103061         CDS       T08308                                 
Name
(RefSeq) H-2 class II histocompatibility antigen, E-D beta chain-like isoform X1
  KO
K06752  MHC class II antigen
Organism
hsp  Hippoglossus stenolepis (Pacific halibut)
Pathway
hsp04145  Phagosome
hsp04514  Cell adhesion molecules
hsp04672  Intestinal immune network for IgA production
hsp05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:hsp00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04514 Cell adhesion molecules
    118103061
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    118103061
 09150 Organismal Systems
  09151 Immune system
   04672 Intestinal immune network for IgA production
    118103061
 09160 Human Diseases
  09172 Infectious disease: viral
   05168 Herpes simplex virus 1 infection
    118103061
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:hsp04147]
    118103061
Exosome [BR:hsp04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   118103061
  Exosomal proteins of epithelial cells
   118103061
  Exosomal proteins of breast milk
   118103061
SSDB
Motif
Pfam: C1-set MHC_II_beta C2-set_2 C2-set_3 Ig_3
Other DBs
NCBI-GeneID: 118103061
NCBI-ProteinID: XP_047194910
LinkDB
Position
23:227078..265002
AA seq 248 aa
MASFFLSFSLFFITVCAADGFLNYVVTNCEFNSTELNDIEYIESYYYNKLEIITFRSSVG
KYVGYTAIGEKNAERLNKGPDLVQARAQKAAYCLRNVGNDAKSALTKSVKPSVRLHSVAP
PAGKHPAMLVCSVYDFYPKLIRVSWQRDGQEVTHEVTSTDELADGDWFYQIHSHLEYTPR
SGEKISCVVEHASLSKPLITDWDPSMPESERNKIAIGTSGLILGLTLSLAGFIYYKRKAQ
GRILVPTN
NT seq 747 nt   +upstreamnt  +downstreamnt
atggcttcattcttcctcagcttctccctcttcttcatcactgtctgcgcagcagatgga
ttcctgaattatgtggtaactaattgtgagtttaactccactgagctgaacgacattgag
tacatcgagtcttactattacaacaaactggagatcatcacgttcaggagcagcgtgggg
aagtatgtcggatacactgcgattggagagaagaacgctgagagattgaacaagggtcca
gatctggtccaggcgagagctcagaaggcggcttactgcttacgcaacgttggaaatgat
gcaaaaagtgctctgacgaagtcagtcaaaccctccgtcagacttcactctgtggcgcca
ccagctggcaaacatccggccatgttggtctgcagcgtctacgacttctaccccaaactg
atcagagtgagctggcaaagagacggacaggaagtcacccatgaggtcacttccactgat
gagctggcagacggtgattggttctaccagatccactcccacctggagtacacgcccagg
tctggagagaagatttcctgtgtggtggaacacgccagcctgagtaaacctctgatcact
gactgggatccatccatgcctgagtcagaaagaaacaagatcgccatcggaacctcagga
ctgatcctgggtctgaccttatctctggctggattcatctactacaagaggaaggcccaa
gggcgaatcctggttcccactaactga

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