Hippoglossus stenolepis (Pacific halibut): 118103160
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Entry
118103160 CDS
T08308
Name
(RefSeq) zinc finger protein GLI2-like
KO
K16798
zinc finger protein GLI2
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Pathway
hsp04340
Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
118103160
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
hsp03000
]
118103160
Transcription factors [BR:
hsp03000
]
Eukaryotic type
Zinc finger
Cys2His2 GLI-like
118103160
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C2H2_15
zf-C2H2
zf-H2C2_2
FOXP-CC
zf-C2H2_4
Zap1_zf1
Motif
Other DBs
NCBI-GeneID:
118103160
NCBI-ProteinID:
XP_047195162
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All DBs
Position
24:706202..728657
Genome browser
AA seq
1380 aa
AA seq
DB search
MSSCVDGKRKRKEQEAVPSAVSPAPHHMFPTFHTPIPIDMRHHEGRYHYEPHALHAMHGP
VGLTGSPVISDISLIRLSPGAVATGDSPFSPPHPYVNPHMEHYLRSVHGSPTLSMIAAAR
GLSPADLAHEHLKERGLFGLPPPPPGASPAEYYHLMASHRSPYSELLMHGAGAAAGAHLS
DYITPIDVSRFSSPRLTPRLSRKRALSISPLSDASIDLQTMIRTSPNSLVAYINNSRSSS
AASSSYGHLSVGGLSPSFPFPHPINPMAYQHLLSQQRGLSAFGHTPPLIQPPPAFSSRQP
GLGLSSLSASVHHNDLMSKNHGSDSAVSSTVDPMVTKRSKVKSEAEGLRPLSPCSPNQHG
SSLDLKDDADRDDCKQEPEAVYETNCHWEGCSKEFDTQEQLVHHINNDHIHGEKKEFVCR
WDECSREQKPFKAQYMLVVHMRRHTGEKPHKCTFEGCCKAYSRLENLKTHLRSHTGEKPY
VCEHEGCNKAFSNASDRAKHQNRTHSNEKPYVCKIPGCTKRYTDPSSLRKHVKTVHGPEA
HVTKKQRSDVPPRPPAPRENGENETGPRIQREDAMSDNGSPRGMDDYLHVKSIKTENSVV
YQSSPGGQSSCSSEPSPLGSATNNDSGVEMAAHSGGSLGDLSTLDELPFVESLGFEDSSG
GVAAVGLHFRKQLGTSQLLEHLKKEKLKTVRDSCRWANNPAPPVLGTKLPPIPASGFLLE
SPSMGGGPMSFPGSGLSKLSSGKPTLQENLSERRDSTCSTLSSVYTLSRRSSGISPCYSS
RRSSQTSQFSANRPSNLSSADSYDPISADLSRRSSQTSHCGGSSGGAGVYRGVGLASPLS
LTPAQHYHLKAQYAAATGGAPPTPLPYLDQMCLKTHTALYGDPQERPTPKGLPYRQYSSY
NTRSLMPHEAPSHIPRRASDPVRRVTTDQPQLQRYNSIGALNRGMTVQPCPPPAADRHRS
AQHGCWRSDGHQRYSYSHRPPSISENVTMETGEEDLTLPDFNTDGDTNCRASANPQHFQG
NLPQQSYYQRRMAVVSPGQQPQKCSSSPRDNRDNLPVSGQVRGNLAVLQQSHNFGSLYNH
LSSNQQTNTEPGANCFRQQRLQMSSNLNEAIIAQRRFSGGVGPYDNNGNAPYPRCSNTAG
ADGGSTCKQEPDDEEPVDMHFADAGFQPVRVKIEDCDGPFLISDQQNCNRTSQNPLHTVN
QSYVRPRPPTEPRPLHRHHSGPKLMQHTRNQSNPEVVSRLFSDDNALYYTGQIQVFESNR
NCDLQVSPVVNVPPFENDAASPGSGGSPASRTLECDAALEQTQIDFDCMLDDGDHSSVMS
GTLSPGLLQNLSRSSSRLTTPRNSVTLPSVPTGTGNMAIGDMSSLLTALAEENKFLNLMP
NT seq
4143 nt
NT seq
+upstream
nt +downstream
nt
atgagctcctgtgtggacgggaagaggaagaggaaagagcaggaagctgttcccagcgct
gtcagtcctgccccccaccacatgttccccaccttccacacgccgatcccgatcgacatg
cgccaccacgagggacgctaccactacgagccgcacgctctgcacgccatgcacggcccg
gtgggtttgaccggcagccccgtcatctccgacatctccctcatccgcctctcgcccggc
gccgtggcgaccggcgactccccgttcagcccgccccacccgtacgtcaacccccacatg
gagcactacctgcgctccgtgcacggcagccccacgctgtccatgatcgccgccgccaga
ggactcagcccggccgacctggcccacgagcatctgaaggagcgcgggctgttcggcctc
ccccctcctcctccgggggccagcccggcagagtactaccacctgatggcgagccaccgc
agcccctacagcgagctgctcatgcacggggccggggccgcggcgggggcccacctgtcc
gactacatcacccccatcgacgtgtcccggttctccagccccagactgacgccccggctg
agcaggaagagagctctgtccatctcgccgctgtcagacgccagcatcgacctgcagacg
atgatccgcacctcgcccaactccctggtggcgtacatcaacaactctcgctccagctcg
gcggccagcagctcgtacggtcacctgtcggtgggaggactcagtccgtccttccccttc
cctcatcccatcaaccccatggcctaccagcacctcctctcccagcagcgaggcctcagc
gccttcggacacactccgcccctcatccagccgccgcccgccttctccagccgccagccg
ggcctgggcctgtcctcgctgtcggcgtccgtccaccacaacgacctgatgtcaaagaac
cacggcagtgactcggccgtcagcagcacggtcgaccccatggtcaccaagaggtcaaag
gtcaagagcgaggcagagggactgaggcctttgtccccgtgttccccgaaccagcacggc
agctcgttggacctgaaggacgacgcggaccgagacgactgcaaacaggagccagaggcc
gtttacgagaccaactgccactgggagggctgcagcaaggagttcgacacgcaggagcag
ctggtgcaccacatcaataacgaccacatccacggagagaagaaggagttcgtgtgccgc
tgggacgagtgttctcgggagcagaagcccttcaaagcccagtacatgctggtggttcac
atgcgccgacacacgggggagaaaccacacaagtgcacgttcgagggctgctgcaaggcc
tactcccgtctggagaacctcaaaacacacctccgctcgcacaccggcgagaagccgtac
gtctgcgagcacgagggatgcaacaaggctttctccaacgcctcggaccgagccaagcac
cagaaccggacgcactccaacgagaaaccctacgtctgcaagatcccgggctgcaccaag
cgatacaccgaccccagctccctcaggaagcacgtgaagacggtccacgggcccgaggcg
cacgtcaccaagaagcagcgcagcgacgtgccgcccaggccgccggcgcccagggagaac
ggcgagaacgagacggggcccaggatccagagagaggacgcgatgtcggacaacggctcc
cccagaggcatggacgactacctgcacgtgaaatccatcaagacggagaactcggtggtg
tatcagtccagccctggcggtcagtcatcatgtagcagcgaaccatcaccacttggcagc
gccaccaacaatgacagtggagtagaaatggcggcgcacagcgggggaagcctgggggac
ctcagcaccctggacgagctgcccttcgtggagtccttgggatttgaggattcctccggc
ggagtcgcggcggtcggcctccacttccggaagcagctcggcaccagtcagctcctggag
catctgaagaaggagaagctgaagacagtgagggactcgtgtcgctgggccaacaaccca
gcccccccggtcctcggcaccaagctcccacccataccagcaagcgggttcctcctggag
agtccaagtatgggtggtggtccgatgtccttccctggttcaggcttgagtaagctgagc
tctggaaaaccaacgctacaggaaaacctgtccgagcgccgggacagcacctgcagcacc
ctgagctcagtttacaccctcagccgccgctcctcgggcatctccccctgctactccagc
cgccgctccagccaaacctcacagttcagtgccaaccgccccagcaacctcagctcagct
gactcctacgaccccatctctgccgacctctcgcggcgctccagtcagacgagccattgt
gggggaagcagcggaggagcaggcgtgtacagaggggtggggctagccagccccctcagc
ctgaccccagcccagcactaccacctcaaggcacaatatgcagctgccactgggggtgca
ccacctacccctcttccatacttggaccagatgtgtctgaagacccacacagctctttac
ggggacccccaggaacgccccacccctaaaggcctcccctacaggcagtacagcagctac
aacacgaggagcttgatgccccacgaggctccgtctcacatcccccgccgagccagtgac
cctgtgagacgagtgaccacagaccagcctcagctgcagcgctacaacagcataggggcc
ctgaacaggggaatgaccgtgcagccatgtccacctcctgcagcagatcgccaccgttca
gcccagcacggctgctggaggtccgatggtcaccagcgctactcgtacagccatcgaccg
cccagcatttctgagaacgtcaccatggagacgggcgaggaggacctgacgctgcctgac
ttcaacaccgatggagatacaaactgcagagcgtcggccaatccacagcatttccaagga
aacctcccgcagcagtcgtactaccagagaagaatggccgtcgtgagtccagggcagcaa
ccacagaagtgttcatcatcaccgagggacaacagggacaacctcccggtctctggccag
gtccgagggaacctggccgtcctccagcaaagccacaactttggatccctgtacaaccat
ctgagctccaaccagcagacgaacactgaaccaggagcaaactgcttccggcagcagaga
ctccagatgtcgtccaatctgaacgaagccattatcgctcagcgtagattcagcggaggg
gtcggtccctatgacaacaacgggaacgccccctacccgaggtgcagtaacacggcagga
gcagacgggggctccacctgcaaacaggagccggatgacgaggagccggtcgacatgcat
ttcgctgacgccggatttcagcctgtgagagttaagattgaggactgtgacggacctttc
ctgatttcagatcagcagaactgtaacaggacttcccagaatcccttgcacactgtgaac
cagagctacgttcggccgaggccaccaacagaacccagacctctacacaggcaccattca
gggcccaagttgatgcagcacacaaggaaccagagcaacccagaggtggtttccagatta
ttctctgatgacaacgctttgtactacacgggacagattcaagtgtttgagtccaacagg
aattgtgaccttcaggtttctcctgtggtgaacgtgcctccttttgaaaacgatgcagca
tctcccggttccggtggaagcccggcgtccaggactctggagtgtgacgcagccctggag
cagacgcagatagactttgattgcatgctggacgacggggatcactccagcgtcatgtcg
ggaactctgagtccgggtttgctccagaatctgtcccggagttcctctcgcctgacgacg
cccaggaactcggtgacgctgccctcggtgccgacggggacggggaacatggccatcggg
gacatgagctcgctgctgactgctcttgccgaggagaacaagttcctgaacttgatgccg
tag
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