Hippoglossus stenolepis (Pacific halibut): 118104692
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Entry
118104692 CDS
T08308
Symbol
iars1
Name
(RefSeq) isoleucine--tRNA ligase, cytoplasmic
KO
K01870
isoleucyl-tRNA synthetase [EC:
6.1.1.5
]
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Pathway
hsp00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
118104692 (iars1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
hsp01007
]
118104692 (iars1)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hsp03016
]
118104692 (iars1)
Enzymes [BR:
hsp01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.5 isoleucine---tRNA ligase
118104692 (iars1)
Amino acid related enzymes [BR:
hsp01007
]
Aminoacyl-tRNA synthetase
Class I (U)
118104692 (iars1)
Transfer RNA biogenesis [BR:
hsp03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
118104692 (iars1)
Prokaryotic type
Other AARSs
118104692 (iars1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1
Ubiquitin_IARS1
Anticodon_1
DUF5915
tRNA-synt_1g
tRNA-synt_1e
Motif
Other DBs
NCBI-GeneID:
118104692
NCBI-ProteinID:
XP_035007630
LinkDB
All DBs
Position
3:11283826..11331795
Genome browser
AA seq
1268 aa
AA seq
DB search
MVEPVPVSISFPTEEEKILKFWQDKDCFQECLKQSKNRPKYTFYDGPPFATGLPHYGHIL
AGTIKDIVTRFAHQSGFHVDRRFGWDCHGLPVEYEIDKTLGIKGPEDVAKMGIAEYNNQC
RSIVMRYSSEWENSVRRMGRWIDFKNDYKTLYPWFMETVWWVFKQLYDKGLVYRGVKVMP
FSTACNTPLSNFESHQNYKDVQDPSVIINFPLVESPEVSLIAWTTTPWTLPSNLALCVNA
EFIYVKVKDNTTDKIYIMMEARLGALFKSESEYTLLDKFPGKTLKGKKYKPLFQYFAKCG
ETGAFQVVTDNYVKEEEGTGVVHQAPYFGADDYRVCTEYKIIQRDQAPICPVDASGCFTS
EVTDFAGQYVKDADKNIIKWLKENGRLVNASNFKHSYPFCWRSDTPLIYKAVPSWFVRVE
HMVDKLLENNGKCYWVPEFVGEKRFGNWLRDARDWAISRNRYWGTPIPIWVSDDYEEVVC
VGSMAELEELTGVKVTDLHRESIDSLTIPSRCGKGTLRRITEVFDCWFESGSMPYAQVHY
PFENRKEFEDTFPADFIAEGIDQTRGWFYTLLVLSTALFGKPPFKNVIVNGLVLASDGQK
MSKRKKNYPDPGLIVQSYGADALRLYLINSPVVRAENLRFKEDGVRDVLKDVFLPWYNAY
RFLVQNVQRLQMEDEIQFLYNENTAKQSDNIMDKWIQSFTQSLIQFFKAEMDAYRLYTVV
PRLVKFVDMLTNWYVRTNRRRLKGESGTEDCLWALETLFSVLFSMCRLMAPFTPFITEMM
YQNLRQLIDPASVDDKDISSIHYLMLPQVRESVIDKRIESAVSQMQSVIELGRVIRDRKT
LPVKYPLKEVVVIYQDPEALKDIQSLEKYILEELNVRQLTLSTDKDKYGISLRAEPDHMV
LGKRLKGAFKSVIGSIKELTNEQLEAFQKTGTIVVEGHELHEEDLRLMYTFNQSSDSAAQ
YEAHSDAQALVLLDVSPDQSMVDEGVAREVINRIQKLRKKGHLVPSDEITVYYRCQPEGE
HLDSVIQAHTDFILATTKAPLLPFPVPKTGGVIIEEKTQLKGADLELVIVKGSSGPRVSL
NGPACTYVNLRVKVNSKEQEGVVLLENPKGDNRLDVAKLQKVCSSIFGTNNTQLRFFNSG
TELTSKTDLQALSGKTLSVTSGSSSPGPIPTADALLCPYVNLLLCDAQPAECQTGEVGTL
LLVNPVGQNGLDYSGLLSEAAKVFGLRSRWLKLYLDQDLTQELPADSSVKSLDTKTLFVR
VLPTTAES
NT seq
3807 nt
NT seq
+upstream
nt +downstream
nt
atggtggagccagtccctgtgtccatcagctttcctacagaggaggagaagatcctgaag
ttttggcaagacaaagactgcttccaggaatgcctcaagcagtccaagaacaggcccaag
tacaccttctatgacggccctccctttgccacgggtctcccccactatggtcacatccta
gccggcaccatcaaggacattgttactcgctttgcccaccagagcggcttccatgttgac
cggcgctttggctgggattgccatggcctgcctgtggagtatgagattgataagactttg
gggatcaaagggcctgaagatgtggccaagatgggcatcgccgagtacaacaaccagtgc
aggagcattgtcatgagatactccagcgagtgggagaattcagtgaggcgaatgggccgg
tggattgacttcaaaaatgactacaagactctctacccgtggttcatggagactgtctgg
tgggtgtttaagcagttgtatgacaagggtctggtgtaccgaggtgtcaaggtcatgcct
ttctccactgcctgcaacacccctctctccaacttcgagtcccaccagaactacaaggat
gttcaggatccatctgtgatcatcaacttcccgctggttgagtctccagaagtttctttg
atcgcctggacaaccacaccctggacactgccgagcaacttggcgctctgtgtcaacgcg
gagtttatatatgttaaagtcaaagataacaccacagacaagatctacatcatgatggag
gccaggctcggagctctgtttaagtcagagagcgagtacacgctgctggacaaatttcct
ggcaagacgcttaaagggaaaaaatacaagcctctcttccagtactttgccaagtgcggg
gagacgggagcgttccaggtggtgaccgataactacgtcaaggaggaggagggtacagga
gtggtccaccaggcaccttactttggagctgatgattacagggtgtgcactgaatacaaa
atcatccagagggaccaggctcctatctgccctgtggatgcctcgggctgcttcacgtca
gaggtcactgactttgcgggacagtatgtcaaagatgctgacaagaacatcatcaagtgg
ctgaaggagaacggccgtctcgtcaatgccagcaattttaaacatagttaccctttctgc
tggaggtctgacacccccctgatctacaaagccgtccccagctggtttgtccgagtggag
cacatggtggacaaacttctcgaaaacaatgggaaatgctactgggttccagagtttgtg
ggtgagaagcgttttgggaactggctgagagacgcacgcgactgggccatttcaagaaat
cgttactggggcacccccatcccaatctgggtcagcgatgactatgaggaggtggtgtgt
gtggggtccatggccgaactggaggaactgaccggagtcaaagtaaccgatctgcatcgg
gagagcatcgacagtctgaccatcccgtcacggtgcggtaaaggcacgctgcggaggatc
acagaggtgtttgactgctggtttgagagcggcagcatgccgtacgcccaggtccactac
cccttcgaaaacaggaaggagtttgaggacactttccccgctgatttcatcgccgaaggc
attgaccagacgaggggatggttctacaccttgttggtgctctccacagccctgtttggc
aaaccacccttcaagaacgtcattgttaatggcttggtacttgccagcgatggacagaag
atgagcaagcgtaagaagaactaccccgatccgggactgatagtgcagagctatggagcc
gatgccctcagactttacctcatcaactctccagtcgtgagagcagagaacctgcgtttc
aaagaggacggtgtgcgggacgtgttgaaagatgtcttcctcccctggtataatgcctat
cgctttctggtgcagaacgttcaaaggctacagatggaggatgagattcagtttctgtac
aacgagaacacggcaaagcagagtgataacatcatggacaaatggattcagtccttcaca
cagtcactcattcagttcttcaaggctgagatggatgcttaccgcctctacactgtcgtg
cctcgcctggtcaagtttgtggacatgctcaccaactggtacgtcagaaccaacaggcgc
cgtctgaagggagagagtggcactgaggactgcctgtgggcgctggaaaccctcttcagt
gttctgttctccatgtgcaggctgatggctccattcacacccttcattacggagatgatg
taccaaaatctgcgtcaactcattgaccctgcctctgtcgacgacaaggacatcagcagt
attcactatctcatgctgccccaagtcagggagagtgtgattgacaagcgcattgagagc
gctgtctctcagatgcagtctgtgattgagctgggcagagtgatccgagacaggaagacc
ctgcccgtcaagtacccactgaaggaggtggtagttatttaccaggatccagaggctctg
aaagacatccagtcactggagaaatacatcctggaagagctaaatgtgcggcagttgacc
ctgtcaacggacaaggacaagtacggcatcagtctgagagctgagccggaccacatggtg
ctggggaagagactaaagggggccttcaaatccgtcattggttctatcaaggagctcacc
aacgaacagctagaggccttccagaagacaggtaccatcgtggtggaaggacacgagctc
catgaagaggacctgaggctgatgtacaccttcaaccagagctcagactcagctgcacag
tatgaagcccactctgatgcacaggccctcgtgctgttggatgtctcccctgaccagtcc
atggtggacgaaggcgttgcccgagaagtcatcaaccgaattcagaaactacgcaagaag
ggccatttggtgccatcagatgagataactgtgtactaccgctgccagccagagggggag
cacttggactctgtgatccaggctcacactgacttcatcctggcgaccaccaaggctccg
ctcttgcccttccctgttcccaaaactggcggtgtcatcatagaggaaaagactcagctg
aagggggccgacttggagttggtcatcgttaagggatcctcaggccctcgtgtctcctta
aatggaccagcttgtacctatgtgaacctcagggtgaaggtcaacagcaaagaacaagag
ggagtggtgctgctggagaaccccaaaggagacaacagactagacgtggccaagctgcag
aaagtgtgcagcagcatctttggaacaaataacacccagctcagattcttcaacagcgga
actgagttgaccagcaaaacggaccttcaggctttgagtggtaaaactttgtcagtaact
tcaggctcttcgtcccccggccccatccccaccgccgacgccctcctgtgtccttacgtg
aatctgctgctctgcgatgcacaaccggctgaatgccagacaggagaggtgggcaccctc
ctgctggtgaacccagtgggacagaatgggctcgactactcaggcctcctgtctgaagcc
gccaaggtgtttggccttcgcagcagatggctcaaactctacctggaccaggacctcact
caggagctgccagctgattcatcagtaaaatctctcgacaccaagactctgtttgtgaga
gttcttcctacaacggccgaatcataa
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