Hippoglossus stenolepis (Pacific halibut): 118105372
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Entry
118105372 CDS
T08308
Name
(RefSeq) plakophilin-1
KO
K10387
plakophilin 1
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
hsp04812
]
118105372
Cytoskeleton proteins [BR:
hsp04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filament-binding proteins
118105372
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Arm
ARM_ARMC5
ZER1-like_2nd
Atx10homo_assoc
Nipped-B_C
Adaptin_N
Insc_C
Motif
Other DBs
NCBI-GeneID:
118105372
NCBI-ProteinID:
XP_035008958
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Position
3:complement(7893277..7903280)
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AA seq
735 aa
AA seq
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MTSLDPLKSVISIGNVDDTSLAVPSENQCSSGNQRVLEQVQSLRRTKSRKSTTSSSRSGS
SSFSPTSPSYEFVFADPLKTQLTSSNGSVFFGNGLSKRLSFEKSMKQQVVNNSKESTVRR
NPAAAAFQYEKRSYATLGTMAVSQPSTSRSEHDLARRRTVANHSSVPLQRLPSSKGTMRA
ERPSSQFIAQGSRQSVYTSNGTFPMKSVKLLNSSQPDGPVTHPWPVAPEITTKTREVFGS
NGNSGVADITMNEAVSCLSSNDETHQHCGASYIQHNTFINDHAKEEVLKLNGIPPLVALL
RSHNSLISETAAAALRNLSFKSNSSKEAIHRRGLTEVVALLKETDSLDLQKQLTGLLWNL
SSADELKPDLLKSALPVLMERVILPYTTGPDQTNSNNQDPEVFYHATGCLRNLSSAKQNH
RQVMRKCRGLVDSLVSYIEECVEAGKPDDKSVENCVCILHNLTFQLEAEAATLFSKITAL
SKTQNRSSSSSSQDDAAPIGCFSPQSKAPEQERQLDYPVVEDPHPTGAGLLFHSKTLLSY
LNLLDTSQRADTQEACCGALHNLTAHEGIVSKVMGHTIVKKLNGLQVIAPLLKSDKANLQ
KSAVALVGNLTNNPGLHSAVALKCLPELGDIINAGTEEGNESDDTLSMVCQATNCLVMKA
PDIGKKLLNRTTINSLGDLSQNNYLPKTSKAASLFLCNLWSDKDLQSFLKKQRMGKPLFL
NDYTKSALQLVQDGH
NT seq
2208 nt
NT seq
+upstream
nt +downstream
nt
atgacgagtctggatccgctgaagtccgtcatctccatcgggaacgtggacgacacgtct
ctcgcggtcccctccgagaaccagtgcagctccgggaaccagcgcgtcctggaacaagtg
cagtctctccggagaaccaagtcccgaaagtccaccaccagcagcagcaggagcggctcc
agctccttctccccgacaagcccttcctacgagtttgtgtttgctgatcctttgaagact
cagttgacctcgtccaatggaagcgttttctttggaaacggcttgtcgaaaaggctcagc
tttgagaaaagtatgaaacagcaagttgtcaacaactccaaggaatcaaccgtcaggagg
aatccagcagccgctgcctttcagtatgagaagaggagttacgccaccctcggcaccatg
gctgtcagtcaacccagcaccagccgcagcgagcatgatctggcccggcggcgcaccgtt
gcaaatcactcctctgtgcctctgcagcgattgccctccagcaaaggtaccatgagggca
gagaggccctccagtcagtttattgcccaaggctcacgccaaagtgtgtacaccagcaac
ggcacatttccgatgaaatccgtgaagctgttgaacagcagccagccggatgggcccgta
acgcatccatggccggtggcccctgagatcacaaccaagactagagaagtttttgggtcg
aacgggaacagtggcgttgcggacatcaccatgaacgaggctgtgtcttgtctctccagc
aacgatgagacgcatcagcactgcggagcttcctacatccagcacaacactttcatcaac
gaccatgcgaaagaggaggtgttgaaactcaacgggatccctcctctggtggcgctgctg
cgcagccacaattctctgatcagcgagacggccgcggccgcgctccgtaacctctccttc
aagagcaacagcagcaaggaggccatacatcgcagaggcctcacagaggtcgtggctctg
ctcaaggaaaccgattctttggatctgcagaaacagctgacaggtctcctgtggaacctg
tcgtctgcagacgagctgaagcccgacctgctgaagagtgcgttgcctgtgttaatggag
cgtgtgatcctgccttacacgacaggtcctgaccaaaccaacagtaacaaccaagaccct
gaggtcttctatcacgccaccgggtgtctgagaaacctcagcagtgcaaagcaaaaccac
cgacaggtgatgagaaagtgtcgaggtctggtcgactctctggtcagttacattgaagag
tgtgtggaggcagggaaaccagatgataagtcagtagaaaactgcgtgtgcatcctgcac
aacctgacgttccagctggaggccgaggctgcgactctgttcagcaaaatcacggctttg
tccaagacccagaaccgcagcagcagcagcagcagccaggacgacgcggcccccatcggc
tgcttcagtccacagagcaaagctccagaacaagagcgccagttagactaccccgtggtt
gaggatccgcatccgaccggggcgggcttgctgttccactccaaaaccctgctgagttac
ctgaacttgctcgacaccagccagcgagctgacacacaggaagcctgctgtggagcgctg
cacaacctcaccgcacacgaaggcattgtctccaaagtaatgggacacaccattgtgaag
aagctgaatggcctgcaggttatcgctccccttttaaagtcagacaaagccaatttgcag
aagagcgctgtggccctcgtaggaaacctgaccaataacccaggcctgcacagcgccgtt
gctcttaaatgtctcccggagctgggggacatcatcaacgccggcacagaggaagggaac
gagtctgatgacaccctgtccatggtctgtcaggccactaactgcctggtcatgaaggca
cctgacatcggcaaaaagctgttgaacaggaccacgataaactcactgggagatctcagc
caaaacaactatttacccaaaaccagcaaagctgcgtcgctgtttctctgcaacctgtgg
tcagacaaagatctacaaagcttcctgaaaaagcaaaggatgggaaagcctttattctta
aatgactacaccaagtcggcactgcagttggttcaagatggacattag
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