Hippoglossus stenolepis (Pacific halibut): 118109813
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Entry
118109813 CDS
T08308
Symbol
bdnf
Name
(RefSeq) brain-derived neurotrophic factor isoform X1
KO
K04355
brain-derived neurotrophic factor
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Pathway
hsp04010
MAPK signaling pathway
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
118109813 (bdnf)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
hsp04052
]
118109813 (bdnf)
Cytokines and neuropeptides [BR:
hsp04052
]
Cytokines
Growth factors (RTK binding)
118109813 (bdnf)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NGF
Spaetzle
NTF3_N
Motif
Other DBs
NCBI-GeneID:
118109813
NCBI-ProteinID:
XP_035013106
LinkDB
All DBs
Position
1:complement(11793467..11809896)
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AA seq
277 aa
AA seq
DB search
MFHQVRRVMTILFLTMVISYFSCMRAAPLRDAPGMRGHRTEGYLGAAATAARGHGTPQSG
GGPGQRGELPSLTDTFEQVIEELLEVEGEAAQLGQGPDKSQGGGGPSSVVNAESKDVDLY
DSRVMISNQVPLEPPLLFLLEEYKNYLDAANMSMRVRRHSDPSRRGELSVCDSISQWVTA
VDKKTAIDMSGQPVTVMEKVPVPNGQLKQYFYETKCNPMGYTKEGCRGIDKRHYNSQCRT
TQSYVRALTMDSKKKIGWRFIRIDTSCVCTLTIKRGR
NT seq
834 nt
NT seq
+upstream
nt +downstream
nt
atgttccaccaggttagaagagtgatgaccatcctgttccttactatggttatttcatac
ttcagttgcatgagagctgcgcccctgagagacgccccgggcatgcggggccatcggacg
gaaggctacttgggcgctgctgcgacggccgcacgaggccatgggactccacagagtggt
ggtgggccaggccagcgtggggaactgccctcgctcacagacacgtttgagcaagtgata
gaggagctgctggaggtggagggcgaggcggcacagctgggacaggggcctgataagagc
cagggaggtgggggcccgtcctctgtggtcaacgcggagagcaaggatgtcgacctgtac
gactcacgggtgatgatcagcaaccaagtgcctttggagccgcccttgctctttctcctg
gaggaatacaaaaactatctggatgccgctaatatgtccatgagggtgcggcgacactcc
gatccctcacggcgtggagagctcagtgtgtgtgacagtattagccagtgggtgacagct
gtggataaaaagacggcaatagacatgtctgggcagccagttaccgtaatggaaaaggtc
cctgtccccaatggccaactgaagcagtacttttatgagaccaaatgcaaccccatgggg
tacacaaaggagggctgcagaggaatagacaagcggcattataattcccaatgcaggaca
acccagtcctacgtgcgagcgcttaccatggatagcaaaaagaagattggctggcggttt
ataaggatagacacttcatgtgtatgcacattgaccattaaaagagggagatag
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