KEGG   Hippoglossus stenolepis (Pacific halibut): 118110124
Entry
118110124         CDS       T08308                                 
Symbol
tdg.2
Name
(RefSeq) G/T mismatch-specific thymine DNA glycosylase isoform X1
  KO
K20813  thymine-DNA glycosylase [EC:3.2.2.29]
Organism
hsp  Hippoglossus stenolepis (Pacific halibut)
Pathway
hsp03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:hsp00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    118110124 (tdg.2)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:hsp03400]
    118110124 (tdg.2)
Enzymes [BR:hsp01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.29  thymine-DNA glycosylase
     118110124 (tdg.2)
DNA repair and recombination proteins [BR:hsp03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     118110124 (tdg.2)
SSDB
Motif
Pfam: UDG AT_hook RXT2_N
Other DBs
NCBI-GeneID: 118110124
NCBI-ProteinID: XP_035013636
LinkDB
Position
5:8684745..8690988
AA seq 421 aa
MFIHSNKSTVKMEENQFTSLTVPSDYFQQWYQSSQQHPEAQHVMPYHNMGYHTEGPRDEL
VMAELSVHREQPLYQDPFYQNYPAAPNHYQEQMYNVRDQQQHLGVQHHSQHHHVIQQQEQ
QSVQHQPQPAGPPQVVTPVKKKRGRPPKQQAEDGETQEEEDEAEAAKKAKRALNRFNGMT
VAEVMAKTLPDVITYNLDILIIGINPGLMSAYKGHHYPNPGNHFWKCLFLSGLTDQQLTF
MHDESLPETYSIGFTNMVERTTPGSKDLSSKEIREGGRQLLDKLQKYKPLIAAFNGKGIY
EIFCKETFGVKAKNLEFGLQPYKIPETETVCYLMPSSSPRCAQFPRAQDKVHFYIKLKEL
RDKMKGSGPKLEVEETQYSFDLLLAKEDAKKMAIKEEQVDPEYESCSAQQDDVRQSSSVS
N
NT seq 1266 nt   +upstreamnt  +downstreamnt
atgttcatccattcaaacaagtcgacagttaagatggaggaaaaccagttcacatcactg
acggttccctcggattattttcagcagtggtaccagtccagccagcagcaccctgaggcg
cagcatgtgatgccctatcacaacatgggctatcacacagaaggtcccagagatgagctt
gtcatggctgagctatctgtccatcgggagcagcctctttatcaggatcctttttaccag
aactaccctgcagccccaaatcactaccaggagcagatgtacaatgtcagggatcagcag
caacatctcggcgtccagcatcactctcagcatcatcatgtaatacagcagcaggaacag
cagagtgtccagcaccagcctcagcctgcggggccacctcaagttgtgacaccagtgaag
aaaaagagaggccggcctccaaaacagcaggcggaggatggcgagacgcaggaggaggag
gatgaggccgaagcagccaagaaggccaagagggctctcaatcgcttcaacggcatgaca
gtggctgaggtcatggccaaaaccctgcctgacgttattacctacaatcttgacattttg
ataattggaattaacccaggacttatgtcagcctacaaaggacaccattacccaaaccca
ggaaaccatttctggaaatgtttgtttctctctggtctaactgaccagcagctcaccttc
atgcatgatgagagcttgccggagacgtacagcatcggcttcaccaacatggtggagagg
accacgcctggcagcaaggacctctccagtaaggagattcgtgaaggaggtcgacagtta
ctcgacaagttgcagaaatacaaaccattaatagcagcttttaatggcaaaggtatttat
gaaatcttttgcaaagaaacgtttggtgtgaaggcaaagaatctggagtttggactgcag
ccctacaaaatcccagaaactgaaacagtgtgctacttgatgccctcatcaagtccgcgc
tgtgcccagtttccccgagcgcaggataaggtgcatttctacatcaagctgaaggagctg
agagacaagatgaaaggttccggacccaaactagaggtggaagagactcagtactccttc
gatctgctgctagccaaagaggatgcaaagaagatggcaatcaaagaagagcaggtggat
ccagagtatgaaagctgtagcgctcaacaagacgacgtgaggcaaagcagcagcgtctcc
aactaa

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