Hippoglossus stenolepis (Pacific halibut): 118110622
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Entry
118110622 CDS
T08308
Name
(RefSeq) LOW QUALITY PROTEIN: intraflagellar transport protein 122 homolog
KO
K19656
intraflagellar transport protein 122
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
hsp03037
]
118110622
Cilium and associated proteins [BR:
hsp03037
]
Primary cilia and associated proteins
Intraflagellar transport (IFT) complex A
118110622
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_IFT122
Beta-prop_IFT122_2nd
Beta-prop_IFT122_1st
Zn_ribbon_IFT122
Zn_ribbon_IFT122_C
Beta-prop_EML_2
Beta-prop_THOC3
WD40
WD40_WDHD1_1st
TPR_IF140-IFT172
TPR_GEMI5
Beta-prop_NUP159_NUP214
WD40_CDC20-Fz
EIF3I
WD40_Prp19
Beta-prop_WDR5
TPR_WDR35
Beta-prop_WDR3_1st
Beta-prop_WDR3_2nd
WDR55
Beta-prop_RSE1_2nd
WDR90_beta-prop_4th
WD40_Gbeta
Beta-prop_IFT140_2nd
eIF2A
Beta-prop_IFT80_2nd
Motif
Other DBs
NCBI-GeneID:
118110622
NCBI-ProteinID:
XP_035014445
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All DBs
Position
6:8570544..8585567
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AA seq
917 aa
AA seq
DB search
MMNGVVSVRNKRAKEKVKIERPGGSSSPIWSVAWNPSKDEHNYILSVADWGQKLSFYQLS
GKQIGKDRTLNYDPCCVTYSSEGEYIVMGGSDKQASLYTKDGVRLSTIGEQNSWVWTCRV
KPDSNFVVLGCQDGTIACYQLISSTVYGLYKDLYAYRDSMTNVIVQHLITEQKVRIKCQE
LVKKIAIYRNLLAIQLPEKIVIYELYSDDSSDMHYCIKENICTEPKCNLMAVCSEHIILS
QEKRLQCLSFTSVREKEWEMESLIGYIKVIGGPPGREGLLVGLKNGAILKIVLDDQLPIT
LLTLSASVRGLDMSAYRKKLAVVDEHNTLLVYDINSKELLFQEPNANSVAWNTQCEDMLC
FSDSGYLNIKAIDFPVQQQKMQGFVVGYNGSKIFCLHDNSLLEVEVPQRALSMYTDLRMF
EYASEFVKEMDTGILTTKPANWAKSSEEPRAAAEMYLSAGEHLKAIDIIGEHGWADMLID
IARKLNKAEHEPLGKCALYFKKLKHHGYASEIYSKMGDLQALMHLHVETRHWEEAFSLVE
NHPQFTSDVFVPYAEWLTKKGRFEGAQEAFHKAGRQNEAVKVLEQLTHNAVVENRFNDAG
YYYSMLSMQCLDIAREDEEQRDEMLKKFEHFQHLAELHHVYRSIQRYTDEPFSSHMPETL
FNICRFLLNNLIKDKPRGISEVSILYALVKQSEKLGAYKLARYCYEKLQELYIPSRLQDS
IELGSLKLRSKPCRDSEGVFNAMMCYRCSTDNPLLNKQGSVCKNCRQPFIYSASSYEVLP
LVQFYLEDNITDEEAARLVDMEVPHMKDVDNELQPLRLDEAADEAEDDPFTAKMSFEQGG
SNFVPIKVSRSALRSMSRRDVLIKRWPRPLKWEYFCSLLPDVSITMCPTCFKMFRXEDYE
SLVTQHKGCPCCRRSEN
NT seq
2754 nt
NT seq
+upstream
nt +downstream
nt
atgatgaatggagtcgtgagcgtacgaaacaagagggcaaaggagaaggttaagatagag
cgtccgggaggctcctcctctcccatctggtctgtagcctggaacccttcgaaggatgag
cacaattacatcctgtctgtggcagactggggtcagaagctttccttctatcagctgagt
ggaaaacagattggaaaagacaggacgctcaactatgacccgtgttgcgtcacctactcc
tctgagggcgaatacatagtcatgggtggttctgataaacaggcctccctctatactaaa
gatggagtgcgactcagcaccattggcgagcagaattcctgggtgtggacgtgccgggtg
aagcctgactccaactttgtggtgttgggctgccaggatggaaccattgcctgctaccaa
cttatctccagtacagtttacggcctctacaaggatctctatgcttatagagacagcatg
accaatgtcattgtccagcacctcatcacagaacaaaaagtgaggatcaaatgccaagag
ctggtgaagaagatcgccatctacagaaacctcctcgccatccagctgcctgagaagatc
gtcatctatgagctttattcagatgactcatcagacatgcactactgcatcaaggagaac
atttgcacagagcctaaatgcaacctaatggcagtctgctccgagcacatcatcctgtct
caggagaagcggctccagtgtctgtccttcaccagtgtcagggagaaagaatgggagatg
gagtccctaattggctacatcaaagttatcggtggtcctccaggcagagagggtctatta
gttgggctgaagaatggagctatcctgaagatagttcttgacgatcagcttcccatcacg
ctgctgacgctgtcagcttcagtgcgtggcctggacatgagcgcctaccgcaaaaaactg
gctgtggtggacgagcacaacactctgctggtctacgacatcaacagcaaagaactgctt
tttcaggagcctaatgctaacagcgttgcttggaacacccagtgtgaagacatgttgtgc
ttctccgacagtgggtaccttaatatcaaggccattgatttcccagtacaacagcagaag
atgcagggttttgtggttggctacaatggctcgaagatcttctgcctccatgacaattct
ttgttagaagtggaggtacctcagagagccctgagcatgtacactgacctgcgcatgttt
gagtatgcctcggagtttgtcaaagaaatggacactgggatcctgacgaccaagccggca
aactgggctaagagcagcgaggagcctcgggctgcagcagagatgtacctgtcagctgga
gagcatctcaaagccattgacatcatcggcgagcatggctgggcagacatgctgatcgat
attgctcgtaagttgaacaaggctgagcacgagccactgggaaaatgtgcactctacttc
aagaagctgaagcaccacggctatgcctcggagatctattccaagatgggggacttgcag
gctctgatgcacctgcatgtggaaacccggcactgggaagaggccttctcactggtggag
aatcacccccagttcacaagtgacgtctttgtgccttatgctgagtggttgactaagaaa
ggtcgtttcgagggggcacaggaagcatttcacaaggcggggcgacagaacgaagctgtg
aaagtcctggagcagcttacccacaatgcagtggtggagaacaggttcaatgacgctggg
tactactactcgatgctgtctatgcagtgtctggacatcgccagagaagatgaagagcag
agggatgagatgctgaagaagtttgagcattttcagcatcttgctgaactccaccacgtc
tatcgctctattcagcgttacacggatgagcccttcagctcccacatgccagagacgctc
ttcaacatctgcaggttcctcctgaacaacctcatcaaggacaaaccacgaggcatctct
gaagttagcatcttgtatgcactggtgaagcagagtgaaaagctgggtgcatataaactt
gccaggtattgttatgagaagctccaggagttgtacattccctctcgcctccaggactcc
atcgagctgggcagcctcaaacttcgcagcaaaccctgcagggacagcgagggtgtcttt
aacgccatgatgtgctaccgctgctccaccgacaaccccctgctgaacaaacaggggagt
gtgtgcaaaaactgcaggcagcctttcatctactcagcttcttcatatgaggtgctgccc
ctggtccagttctacctggaggacaacatcactgatgaggaggctgcccgacttgttgac
atggaggttcctcacatgaaagatgtggacaatgagctgcagcctttgaggctggatgag
gctgcagatgaagcagaggacgacccattcactgccaaaatgagctttgagcaggggggc
tcgaactttgtccccatcaaggtgagtcgctcagcgctgcgctccatgagcaggagggac
gtcctgatcaaacgctggcccaggccgctcaaatgggaatacttctgctccctgctgcca
gatgtgagcatcaccatgtgccccacctgcttcaagatgtttcgttgagaggattatgag
tctctggtgactcagcacaagggctgcccctgctgtcgcagatcagagaattaa
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