Hippoglossus stenolepis (Pacific halibut): 118111389
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Entry
118111389 CDS
T08308
Name
(RefSeq) plakophilin-1
KO
K10387
plakophilin 1
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
hsp04812
]
118111389
Cytoskeleton proteins [BR:
hsp04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filament-binding proteins
118111389
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Arm
Atx10homo_assoc
Motif
Other DBs
NCBI-GeneID:
118111389
NCBI-ProteinID:
XP_035015836
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All DBs
Position
6:11821397..11837107
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AA seq
723 aa
AA seq
DB search
MTALEPLRSAMTVGSGEDTSLALPSDKKLRTGQQRVLEQVHTIKRGKSKSWKNGQPTPSH
AGLFQQSLTSDSEFGTFKFTPSKANGTFSHSNSSMSAGHNKAVNFQKSRSLSNKVSRGRY
QSTSGGWEQHMQGSNWPQGPNGMKTSRSDPALVPQYSGAPAPVMRAKGQAHQSQQSIYTS
ANRHSTYSMTNGTPMTNSQTRIVQQPSAHSYTEGRMGTMKTTKLQLQQSAVDSGINVSEL
TLKEAVENLSHPDESFQQCGATFIQHTTFKEELAKQEVFQLGGIPLLVTLLRSPSPGVGQ
AAAGALRNLVFKDKSNKLEVQHCGGIGKALQLLKESDSTETQKQITGLLWNMSSTDELKG
ELTATALPALTENVVVPFTCWSDNSANNNIHPDVFCNATGCLRNLSCGQQRERKAMRECN
GLIDSLMSYIQSCVAEDNPDDKSVESCACILHNLSYQLEKESPTTFDKYQPQIRNQLESK
KSSAIGCFSPRSGKVQKEFLFDVDRAMPEDSTPSGEELLCHPKAMKTYLSLLGSSQKDAT
LEACCGTLRNLTASNGLGSMAVTRILAQKLGALPHISPLLKSSNGALQKAAVSLLSNMCQ
TCSVQPTMAKQILPDLTSLLSSGPREMGNSDNTISAACHTARALMLAEPEISKKVINNEL
VTSLADLSENGSFPKGSKAASLLLYNLWNEKTLQGAVKKLGLAKTLFVNSNTTAVHRSAQ
IID
NT seq
2172 nt
NT seq
+upstream
nt +downstream
nt
atgacggctttggagccgctgagatcggcgatgaccgtcgggagcggggaggacacgtcg
ctcgcgctgccctccgacaaaaagctgcgcacgggacagcagcgcgtgctcgagcaggtg
cacaccatcaagaggggcaagtccaaatcctggaagaacggacagccgactccatcccat
gcaggcctgttccagcagtctttgacatcagattccgagtttgggacgttcaagtttact
ccatccaaagcaaatggcaccttcagccacagcaactccagcatgtcagcaggccacaac
aaagcggtaaactttcagaagagtcgctccttgtccaataaagtctccagaggaagatat
caaagcacctcaggcggatgggaacagcatatgcaaggctccaactggccccagggtccc
aatgggatgaaaaccagtcgcagtgaccctgccttggttcctcaatattctggcgcacct
gcacctgtcatgagagccaaggggcaggcgcaccaaagccagcagtccatctatacttca
gccaatagacacagcacctactccatgaccaacggcactcctatgaccaacagccagaca
cgcattgtccagcaaccatcggcccattcctacactgagggcaggatgggaaccatgaaa
acaaccaagctgcaactacagcaatcagctgtggacagtgggataaacgtatcagagctg
accctgaaggaggctgtagagaatctgtctcaccctgatgagagtttccagcagtgcgga
gccaccttcatccaacacaccaccttcaaagaggagcttgccaaacaggaggttttccaa
ctagggggtatccctcttctcgtgaccctgctgcggagccccagccctggggtgggccag
gctgctgctggcgccctgaggaacctggtgtttaaggacaagagcaacaagctggaggtt
caacactgtggtggtataggcaaggccctgcagctactaaaggagtccgattctactgag
actcagaaacaaatcacaggcctgctatggaacatgtcgtctaccgatgaactgaaggga
gaactcacagcgactgcactgcccgccttgaccgagaatgtggtggtgccgttcacatgc
tggtcggacaacagcgccaacaacaacattcaccccgatgtcttctgcaacgccacgggg
tgcctgcggaacctgagctgtggtcagcagagggagagaaaggcaatgagagaatgcaat
ggcctcatcgactccctcatgagttacatccagtcctgtgttgcggaggataaccctgat
gacaagtctgtggagagctgtgcatgcatccttcacaacttgtcctaccaactggagaag
gagtccccaacgacctttgacaagtaccaacctcaaatcaggaaccagctcgagagtaag
aaaagctccgcgattggatgcttcagccccaggagcggcaaggttcaaaaggagtttttg
tttgatgtggatcgggcaatgccagaggacagcaccccttcaggcgaagagctgctgtgc
catccgaaagccatgaaaacctacctctccctgctgggctcgtcccagaaagacgccacc
ctggaggcctgctgcggtaccctgcggaacctcacagccagcaatgggctgggctccatg
gccgtgaccaggattctggctcagaagttgggcgctctgccgcacatttctcctctgttg
aagtcgtctaacggtgccctgcagaaggccgccgtttccctgctgagtaacatgtgtcaa
acctgcagtgtgcagcccaccatggcaaagcagattctgccggatctcacgagcctcctc
tcctcaggcccccgtgaaatgggaaacagcgataacaccatatcagcagcctgccacaca
gctcgggctctgatgttggcagaacctgagatcagcaagaaggtcattaataatgaactg
gtgacatcactggctgacctcagcgagaatgggtctttccccaaaggcagcaaagcagcc
tcattgctgctctacaacttgtggaacgagaagactcttcaaggtgctgtgaagaagctg
ggattggccaagacactttttgtcaatagcaacaccacagcagtgcacaggtcggcgcaa
atcatcgactga
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