Hippoglossus stenolepis (Pacific halibut): 118111884
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Entry
118111884 CDS
T08308
Name
(RefSeq) E3 ubiquitin-protein ligase XIAP
KO
K04725
E3 ubiquitin-protein ligase XIAP [EC:
2.3.2.27
]
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Pathway
hsp04120
Ubiquitin mediated proteolysis
hsp04210
Apoptosis
hsp04217
Necroptosis
hsp04510
Focal adhesion
hsp04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
118111884
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
118111884
04217 Necroptosis
118111884
09144 Cellular community - eukaryotes
04510 Focal adhesion
118111884
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
118111884
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
hsp01002
]
118111884
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
hsp04121
]
118111884
03029 Mitochondrial biogenesis [BR:
hsp03029
]
118111884
Enzymes [BR:
hsp01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
118111884
Peptidases and inhibitors [BR:
hsp01002
]
Peptidase inhibitors
Family I32: IAP family
118111884
Ubiquitin system [BR:
hsp04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
118111884
Mitochondrial biogenesis [BR:
hsp03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Retention of mitochondria
118111884
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BIR
zf-C3HC4_3
Prok-RING_4
UBA_BIRC2-3
Motif
Other DBs
NCBI-GeneID:
118111884
NCBI-ProteinID:
XP_035016539
LinkDB
All DBs
Position
7:complement(9008609..9013956)
Genome browser
AA seq
458 aa
AA seq
DB search
MCDLRQDSNLESDYCADFSLLNSRLDSFRGSSLAQQVPAERLAQAGFYLTGPADRVRCFS
CQRTVENWHSGDRPVERHKEVSPFCTFLSCSHRTSLNPGSICNAETEDLEYRLRTGSVVD
ESTYPMAPHMRSEEARLQTFSSWPSFAPVRPQDLAQAGLYYLGEGDRVQCFCCGGMLGAW
EPEDTAWGEHTKHYPCCYFILGHDVGNIPFQGGIEEELGSRQHQHARVPMGSFEERLGSF
AGVQHPIDHDRLARAGFYSTETGDRVLCFRCGGGLKAWQPEEDPWEEHAKHYPGCSFLLA
EKGPEFVNSIQLQDPRRNGATSSHQNGFSGKTNEALRSAMAQKAVEMGLNPCEVEKTILE
KISRTGSGYSSLEALLEDCLNNSHESDTTETEKPDENPLEKLMKLQREKQCKICMDRDIS
IVFIPCGHLVSCAECSKSLSKCPICCGAITQKLKTYIS
NT seq
1377 nt
NT seq
+upstream
nt +downstream
nt
atgtgtgatctcaggcaagacagtaatttggagtcagattactgtgctgatttctccctg
ttgaacagtcgtctagactcgttccgtggctccagcctggcccagcaggtgccagcagag
aggctggcccaggctgggttctacctcactggcccggccgaccgggtccgctgtttcagc
tgtcaacggactgtggaaaactggcacagtggagacagacctgtagagaggcataaagag
gtctccccgttttgcacgtttctcagctgctcccaccgcaccagtttgaaccccggttcc
atctgcaatgctgagacagaagacctggaatatcgtttgagaacgggatcagtggttgat
gagtccacctaccctatggctcctcacatgaggagcgaggaggcccggcttcagaccttc
tcttcttggccctcttttgcaccagtgcgaccccaggatctggcccaagctggcctctac
tacctgggggagggtgaccgggtgcagtgtttctgctgtggtggcatgctgggtgcctgg
gaaccagaggacactgcctggggagagcataccaaacattatccctgctgctacttcatc
cttggccacgatgtgggcaacatcccattccaggggggtatagaggaggagttgggcagt
agacaacaccaacacgcccgcgtccctatgggcagttttgaggagaggcttggtagtttt
gcaggtgtccagcacccgatcgatcacgacagactcgccagagctggcttctacagcaca
gagacaggagacagggtgctgtgtttccgctgtggtggaggcttgaaggcctggcagccg
gaggaagacccttgggaagagcatgcaaaacactaccctggatgcagcttcctattggca
gaaaagggaccagaatttgtcaacagcatccagctgcaagacccacgacgaaatggagct
acttcaagtcatcagaatggattttctggaaaaacaaatgaggcactgcggtcggccatg
gctcagaaggccgtagagatgggtttaaatccatgtgaggtggaaaagaccatcttggag
aagatcagtcgcacaggctcaggctactccagcctggaggcacttctggaggattgcctc
aacaattcacacgagagtgatactacagagacagagaagccagatgaaaacccactggag
aagctgatgaagctccagagggaaaaacagtgtaaaatatgtatggacagagacatttct
atcgtcttcatcccatgcggtcacctggtcagttgcgctgagtgttcaaagtcactcagc
aagtgcccaatctgctgtggtgccattacacagaagctgaagacctacatctcttaa
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