Hippoglossus stenolepis (Pacific halibut): 118111928
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Entry
118111928 CDS
T08308
Symbol
sqstm1
Name
(RefSeq) sequestosome-1 isoform X1
KO
K14381
sequestosome 1
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Pathway
hsp04137
Mitophagy - animal
hsp04140
Autophagy - animal
hsp04217
Necroptosis
hsp04218
Cellular senescence
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
118111928 (sqstm1)
04137 Mitophagy - animal
118111928 (sqstm1)
09143 Cell growth and death
04217 Necroptosis
118111928 (sqstm1)
04218 Cellular senescence
118111928 (sqstm1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
hsp04131
]
118111928 (sqstm1)
03029 Mitochondrial biogenesis [BR:
hsp03029
]
118111928 (sqstm1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
hsp04147
]
118111928 (sqstm1)
Membrane trafficking [BR:
hsp04131
]
Autophagy
Mitophagy
Cargo receptors
118111928 (sqstm1)
Pexophagy
118111928 (sqstm1)
Aggrephagy
118111928 (sqstm1)
Xenophagy
118111928 (sqstm1)
ER-phagy
ER-phagy recepters
118111928 (sqstm1)
Other autophagy associated proteins
Midbophagy
118111928 (sqstm1)
Mitochondrial biogenesis [BR:
hsp03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-dependent mechanism factors
118111928 (sqstm1)
Exosome [BR:
hsp04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
118111928 (sqstm1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UBA_5
ZZ
PB1
Presenilin
Motif
Other DBs
NCBI-GeneID:
118111928
NCBI-ProteinID:
XP_035016653
LinkDB
All DBs
Position
7:complement(28051317..28054952)
Genome browser
AA seq
418 aa
AA seq
DB search
MSVVTVKIYLLGKDEAVKEIRRFTMNQDVSFEQLNQKTASVFTNLKNFNMFYRDEDGDLV
AFSSDDELTMGLSCMKDNTFRLFIKEKKEHRRDFPLHAFPPFTFAPPPSHHAPPLHLAPP
PALHPNVTCDGCEGPVVGTRFKCSVCPNYDLCSTCQAKGTHTEHALLPIWHPLQQWFPRG
MFNKLHNMKRIRCMWNQTQIQNQGQTHNQGQNQDQTHNQDQTHNQDQTQDQTQDQTQEQA
SDCASQASVDFLKNIGEGVAAMLSPLGIDVDIDVEHEGQRSKVNTCQSSGGWGDVEMDGV
GSEGSKIGRESDEEWTHLSPREVDPSTGELQSLQPGEQDQDPFSGGKQGPTGLREAALYP
HLPEEADPRLIESLSLMLTMGFNDEGGWLTRLLQAKNFDIGAALDAIQYAKKPRPPQP
NT seq
1257 nt
NT seq
+upstream
nt +downstream
nt
atgtcggtggtcacggtgaagatttacctgctcggtaaagacgaggcggtgaaagaaatc
cgcaggttcacgatgaatcaggacgtttccttcgagcaactgaaccagaaaactgcgtca
gttttcaccaacctgaagaacttcaatatgttctacagagatgaagatggagacctggtg
gcgttttcctctgatgatgaactgacgatgggtttgtcgtgtatgaaggacaacaccttc
cgcctcttcatcaaagagaaaaaggagcaccgtcgagactttcctctccacgccttcccc
cccttcacctttgccccccctccttcccaccatgcccctccccttcacctggccccgccc
cccgccctgcaccctaatgtcacctgtgacggctgtgaaggtcccgtggtgggaactcgt
ttcaagtgttcggtttgtccaaactacgacctttgttccacctgccaggccaaagggact
cacaccgagcacgctctgctgcccatctggcacccgctgcagcagtggtttcctcggggg
atgtttaataaacttcataacatgaagaggattagatgcatgtggaaccagacccagatc
cagaaccagggtcagacccataaccagggtcagaaccaggaccagacccataaccaggac
cagacccataaccaggaccagacccaggaccagacccaggaccagacccaggaacaggct
tctgactgtgcttctcaggccagcgtggacttcctgaagaacattggggaaggagtggcg
gccatgttgagcccgctgggtattgacgtggacatcgacgtggagcacgagggtcagagg
tcgaaggtgaacacttgtcagagttcaggtgggtggggtgacgtggagatggacggagtc
ggcagtgaggggtcaaagattggcagagaatctgatgaggagtggactcacctcagcccc
agagaggttgacccctccactggagaacttcagtccctgcagcctggggaacaggaccag
gaccccttttcaggaggaaagcaggggccaacaggtttgagggaggcagctctatatcct
cacctgcctgaagaggcggacccccgtctgatcgagtctctgtccctcatgttgaccatg
ggcttcaatgatgagggggggtggttgactcgactccttcaggccaaaaacttcgacatt
ggagccgcgctcgacgccatccagtatgccaagaagccccgcccacctcagccgtga
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