Hippoglossus stenolepis (Pacific halibut): 118112004
Help
Entry
118112004 CDS
T08308
Name
(RefSeq) LOW QUALITY PROTEIN: protocadherin gamma-C5
KO
K16497
protocadherin gamma subfamily C
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
hsp04515
]
118112004
Cell adhesion molecules [BR:
hsp04515
]
Cadherins
Protocadherins
118112004
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_C_2
RET_CLD1
Motif
Other DBs
NCBI-GeneID:
118112004
NCBI-ProteinID:
XP_035016869
LinkDB
All DBs
Position
7:complement(15739030..15741775)
Genome browser
AA seq
836 aa
AA seq
DB search
MICRWEITSCCKGPRMTKRMGYGDWRWQALWWHHFFLLWSTTDGQTRYSIPEELERGSVV
GNLAKDLGLGLSEIFDRKLRVASEADEQYFSVDAGKGELVVNDRIDREALCGQSASCVLP
LQVVIENPLQLNRIEVEIRDVNDNAPRFLKSDHIIEIAESTVVGVRFPLESAEDPDVGSN
GLKTYTLSKDDCFILKVKEIENGRKLPELVLNKSLDREKKAIHNLFLTAMDGGNPVKSGT
SKITITVLDINDNVPLFEHNVYKVAVQENSANGSFLITTKATDIDEGPNGEIEYSLGIHT
PPSVLSLFHIDAVTGDIYLKKQLDHEDQTSYRIDISAKDKGFPKMEAHCSVQVDVLDVND
NPPEILLTSKPTSVPEDSRSGTVVALLKVRDLDSGDNSKVTLQLPRGSPFILKPSFSNNY
ALVTSGTLDRESFLEYNIEITATDSGSPPLSSKKIIPVSITDVNDNPPVFSQPSYNVYLK
ENGVPGSILYSVSASDLDFGENAKISYSILDSKVQDVSVSSYVYINSDNGSIYSMHSFDY
EKLKVFQIQVQAKDQGSPSLSSNTTVHVFILDQNDNXPAVIYPSSAALGXLSHQRMPRSA
KAGHLVTKMTAVDADSGHNAWISYKVAEATDASLFTVNLYTGEVRTKRAVSEQDDSSQRL
LIEIKDDEAPVQSSTVTVSILLEDGLHEPILDLRQKVSEPSKKTGRITLYLILSLASVSV
LSVVTFLILAVKCMRSSRSSGSCCMTQGDYDGYKNPNRNLQIQLNTDGPIKYVEVMGGDM
LSQSQSFRSCMSPMSEYSDFTMIKPSSTTDFKEVISVLDASLPDSTWTFESQQVSR
NT seq
2511 nt
NT seq
+upstream
nt +downstream
nt
atgatatgtcggtgggaaataacgtcctgttgtaagggaccgaggatgacaaagagaatg
ggatacggagactggagatggcaggcgctttggtggcatcatttctttctcttgtggagt
acaacagacggacagacgcgttacagcatcccggaggagctggagcgaggctctgtggta
ggaaatctagccaaagatcttggtttgggactgtctgagattttcgatcgcaagctgcga
gtcgcctctgaggctgatgagcagtatttcagcgtggatgcggggaagggcgagctggtg
gtgaatgacagaatagacagagaggctctatgtggacaaagcgccagctgtgttctacct
ctgcaagttgtaatagagaacccgttacagttaaaccggatagaagtggaaataagagac
gtgaacgacaacgctcctcgttttctcaaaagcgatcatataatagaaatagctgaatcc
accgttgtaggtgtgcgttttcccttagagagcgcagaggatcccgatgttgggagtaac
ggattgaagacgtacactctaagcaaagacgattgcttcattttaaaagtaaaagaaatt
gaaaatggaagaaagttacccgaattagttttaaataaatcattagatcgggagaaaaag
gcgattcacaatttatttctcactgctatggacggaggaaacccggtcaaatccggaact
tcaaaaataactataacagttcttgatattaatgataatgtgccattattcgaacataac
gtttataaagtggctgttcaagaaaacagtgcgaatggctcgtttttaatcacaacaaaa
gccaccgacatagacgagggtccaaatggagaaattgagtactcacttggcatacacaca
ccaccatcggtgctgtcgttgtttcatatcgatgctgtaactggagatatatatttgaaa
aaacagttagaccatgaagatcaaacctcgtatcgaatagacataagtgcgaaagacaaa
ggctttcctaagatggaggctcactgcagtgtgcaggtggatgtcttagacgtaaatgac
aatcccccagaaatactgctgacttcaaaacccacttctgtacccgaagactctcgcagt
ggcacagttgttgctttgctcaaagtcagagaccttgattcaggggataacagtaaagtg
actttacagcttcccagaggttctccttttattttaaaaccatcattttctaacaattac
gcactggttaccagtggtactttagacagggagagtttcttagaatataatattgaaata
acagccactgactcaggctctcctcctctgtccagtaagaaaattataccagtcagcatc
actgatgtgaatgacaaccctcctgtattctctcagccctcctataatgtgtatttaaag
gagaatggagtaccaggatctatactgtactcagtatcagcctctgacctggattttggt
gaaaacgctaaaatctcttactctatactggactctaaagtgcaggacgtttctgtctca
tcgtatgtttacattaactcagataacggcagcatctacagcatgcactcgtttgactat
gagaaactgaaggtgtttcagattcaggttcaggcaaaggatcagggctctccgtctctc
agcagcaacaccaccgtccatgtttttatcctggaccagaacgacaacngccccgctgtt
atttacccctcctccgctgccctgggcntcctctctcaccagaggatgccccgctccgct
aaagcgggtcacctggtcactaagatgacggccgtggacgcggactcgggccataacgcc
tggatctcctacaaagtggcggaggccacagacgcctctctgttcactgtcaatctgtac
acaggggaggtgaggactaaacgcgctgtgtccgagcaggacgactcctctcagaggctg
cttatagagatcaaggacgacgaggcaccggtccagtcctccaccgtcacggtgtccatc
ctgctggaggacggtctccatgagcccatcttagacctccgacagaaagtgtccgagccc
agcaagaaaactgggagaataaccctgtatttgattctctctctggcctcggtgtccgtg
ctgtctgtggtgacttttctcatcttagcggttaaatgcatgaggagcagcagaagcagc
ggtagttgctgcatgacacagggcgactatgatggttacaagaaccccaacagaaacctg
cagattcagctcaacactgatggacccataaagtacgtggaggtcatgggaggagacatg
ttgtctcagagtcagtccttcaggtcctgtatgtctccaatgtccgagtacagtgatttc
actatgattaagcccagcagcaccactgactttaaggaggtgatcagtgtcctggatgcg
tctttacccgacagcacctggacctttgagagccagcaggtgagcagataa
DBGET
integrated database retrieval system
