Hippoglossus stenolepis (Pacific halibut): 118112333
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Entry
118112333 CDS
T08308
Symbol
smad5
Name
(RefSeq) mothers against decapentaplegic homolog 5
KO
K16790
mothers against decapentaplegic homolog 5
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Pathway
hsp04081
Hormone signaling
hsp04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
118112333 (smad5)
09133 Signaling molecules and interaction
04081 Hormone signaling
118112333 (smad5)
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Gene cluster
GFIT
Motif
Pfam:
MH2
MH1
IRF-3
DUF4223
Motif
Other DBs
NCBI-GeneID:
118112333
NCBI-ProteinID:
XP_035017443
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Position
7:complement(7282046..7294392)
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AA seq
473 aa
AA seq
DB search
MTSMSSLFSFTSPAVKRLLGWKQGDEEEKWAEKAVDALVKKLKKKKGAMEDLEKALSCPG
QASKCVTIPRSLDGRLQVSHRKGLPHVIYCRVWRWPDLQSHHELKPLEVCEYPFGSKQKE
VCINPYHYKRVESPVLPPVLVPRHSEFNPQHSLLVQFRNLTHNEPHMPLNATFPESFQQP
HSGGGSSGGGGGGGSFPISPNSPYPPSPASSGTYPNSPASSGPSSPFQLPADTPPPAYMP
PDEQLGQENQSMETSSSVVPQNMPRGDVQPVEYEEPSHWCSIVYYELNNRVGEAYHASST
SVLVDGFTDPSNNKNRFCLGLLSNVNRNSTIENTRRHIGKGVHLYYVGGEVYAECLSDTS
IFVQSRNCNYHHGFHPTTVCKIPSGCSLKIFNNQEFAQLLAQSVNHGFEAVYELTKMCTI
RMSFVKGWGAEYHRQDVTSTPCWIEVHLHGPLQWLDKVLTQMGSPLNPISSVS
NT seq
1422 nt
NT seq
+upstream
nt +downstream
nt
atgacctccatgtccagtcttttctccttcacaagcccagcagtcaaacggctgcttggc
tggaagcagggagacgaggaggagaaatgggcagaaaaggctgtggatgcgctcgtgaag
aagctgaagaaaaagaaaggtgccatggaggacctggaaaaagccctgagctgcccggga
caggccagcaagtgtgttaccattccaagatcattggacggacggctacaggtttcccac
aggaaaggtctgcctcacgtcatctactgccgagtgtggcgctggcccgacctccagtcc
caccatgagctcaaacccctggaggtgtgcgagtacccgtttggctccaaacagaaggag
gtctgcatcaacccatatcactacaagcgggtggagagccctgtgcttcctcctgtcctg
gtaccacggcacagcgagttcaacccacagcatagcttgctggtacagttccggaaccta
acccacaatgagccacacatgcccctgaatgccacctttccagagtccttccagcagcct
cacagtgggggcggcagcagcggtggaggaggtggaggaggctctttccccatctctccc
aactcgccctatcctccttctccagccagcagtggtacttatccaaattctcctgccagc
tcggggccctccagtccattccagctcccagctgacaccccacccccagcctacatgccc
cccgatgagcagctgggccaggagaaccagtccatggaaacaagcagcagtgtggtgccg
cagaacatgcccagaggagatgtgcaaccagttgagtacgaggagccgagccactggtgc
tctattgtctactatgagctcaacaatcgtgtaggtgaggcttatcatgcctcctcaacc
agcgttcttgtggatggcttcactgacccttcaaacaacaagaaccgcttctgcctcgga
cttctatccaacgtcaaccgcaactccacaatcgaaaacacccgtcgacacattggcaaa
ggtgtgcacctgtactatgtgggaggagaggtttatgcagagtgcctcagtgacaccagc
atttttgtccagagccgcaactgtaattatcaccacggcttccaccccaccacagtctgc
aagatccccagtggctgtagcctcaagattttcaacaatcaggagtttgctcagcttctg
gcccagtcggtcaaccacggctttgaggccgtctacgagcttaccaagatgtgcaccatt
aggatgagctttgtcaagggctggggagcagagtaccaccgacaggacgtcaccagcacc
ccctgctggatcgaagtgcacctgcatgggcctctccagtggctggacaaggtcctaaca
caaatgggttcgcctctcaaccccatctcctctgtgtcctaa
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