Hippoglossus stenolepis (Pacific halibut): 118112496
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Entry
118112496 CDS
T08308
Symbol
fbn1
Name
(RefSeq) fibrillin-1
KO
K06825
fibrillin 1
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Pathway
hsp04350
TGF-beta signaling pathway
hsp04518
Integrin signaling
hsp04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
118112496 (fbn1)
09133 Signaling molecules and interaction
04518 Integrin signaling
118112496 (fbn1)
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
118112496 (fbn1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
hsp00536
]
118112496 (fbn1)
Glycosaminoglycan binding proteins [BR:
hsp00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
118112496 (fbn1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EGF_CA
cEGF
EGF
hEGF
FXa_inhibition
TB
EGF_3
Fibrillin_U_N
Plasmod_Pvs28
EGF_FBN_1st
EGF_PEAR1L
Motif
Other DBs
NCBI-GeneID:
118112496
NCBI-ProteinID:
XP_035017743
LinkDB
All DBs
Position
1:7674278..7734794
Genome browser
AA seq
2918 aa
AA seq
DB search
MSDSKVGGARLQQLAVALVALLSLCAELRDAAEVVVVDTGDSEPVTKQTQSRAKRRGGSD
VLRGPNVCGSRNNAYCCPGWKTLTGGNQCIVPICRSSCGDGFCSRPNMCTCPNGQISASC
GSKSVQHCNIRCMNGGTCAEDNCQCQKGYVGNHCGQPVCENGCLNGGRCVAPNRCVCTYG
FTGAQCERDYRTGPCFASVNNQMCQGQLTGIVCTKTLCCATVGRAWGHPCEMCPAQPHPC
RRGFIPNHRTGACQDVDECQAIPGICAGGNCINTVGSFECKCPAGHKFHEVTQKCEDLDE
CSNIPGLCGIGECSNTAGSFFCKCPQGYHSSLDGSRCIDARGGYCYSGVLNGRCANQNSQ
LLTKMQCCCDSGRCWSDGSTPEMCPVRATEEYQKLCFQIPDGNGGVPVPGRVPGSPNLPS
IYPVPYPGQTPGQIPGVIPGQIPIQVPGQGPGQIPIQYPGPYPGPYPGQYPILFPGHLPI
QPPPGPAIIQTQNITNMCQAYRNLCLNGRCIPMPGIGYRCECNMGFSLDGRGECVDDDEC
ERNPCAHGECVNTPGSYICQCPVGFQTTATRTECRDLDECVANGRICNNGRCVNTEGSFH
CVCNAGFEITADGKNCQDQDECLIRNMCLNGLCINEDGSFKCICKPGFLLDSSGRMCVDI
DECETPGMCMNGHCVNTEGSFRCECMAGMAVGLDGRVCVDTHMRSTCYGGYKRGQCVRPL
FGAVTKSECCCATTEYAYGEPCQPCPPQSSAEFLVLCPNSIGVTGDGRDINECALDPEMC
QNGVCENMLRTYKCTCNDGFEVDLTGKNCVDIDECLMNRLLCDNGLCRNTPGSFTCQCPK
GYRFNPASDVCEDVNECESSPCINGECMNSQGSFVCLCTMGSSLDSSALECIETTKSTCW
LKIVNNRCEVNINGATLKSHCCSTLGEAWNSPCAKCEKDPICGKGFSRARGNVCEDVDEC
QVFPGVCINGKCINTPGSFFCQCPPGMTVDVSGRTCIDLRTEQCYLTHEDERCGAPIPGK
HRVDACCCSVGVAWGPDCDECPEKGGTDYTRLCPRGPGFSHRGDFINGRPFLKDINECRM
INTLCSNGRCRNTIGSFRCRCDSGYALDSDERNCTDIEECRISPDLCGQGRCVNTAGDFE
CECFEGYESGFMMMKNCMDIDECERNPLLCRGGECVNTEGSFQCVCPDGHEIAPDGSACL
DINECELSDRLCRNGQCVNMIGRYQCTCDTGYKSTESRLECVDIDECTIEFGGCETFCTN
SEGSYECSCNSGYALMPDLRSCTDIDECEENPDTCDGGQCTNTPGTYQCLCFDGFMSSED
MKTCLDVDECELNPNICLSGNCENTKGSFICHCELGYSVRKGTTGCTDINECEIGAHNCD
RHATCTNTAGSFKCSCGPGWIGDGLKCTDLDECSNGTHMCNNNADCLNTLGSYRCACKDG
FSGDGFYCSDSDECADNGNLCESGHCLNLPGGFRCECDMGFFPTTDGKACEDIDECTFSD
ICVNGRCQNMPGLFRCDCNFGYELDRSGGNCTDINECADPTICINGMCINIPGNYHCNCP
PDFELNPTRVGCVDTRSGSCFLDVRSRGDASESLDCSNEIGVGVSKASCCCSLGQGWGNP
CESCPYVNSTEYKTLCPGGEGFRPNPITVILEDINECQELPGLCQGGQCINTFGSFQCEC
PRGYALNTETRVCEDVNECERPGICGPGQCYNTIGNYTCICPVDYMQVNGGNNCMDMRKS
YCYRNFYSDNRTCEGELTYNMTKKMCCCSYNIGRAWNKPCEQCPVPSTDDFAILCGSVRP
GYYIDITTGRVIDIDECREIPGVCENGVCINMIGSFRCECPIGFIYNDKLLICEDIDECQ
NGPVCQQNAACLNVPGSFRCECKSGYRSTPTGQCLDRNECIENSGICNPGQCIDTLGSYR
CICPNGFKTTRDQSMCVDVDECERQPCGNGTCKNTVGSYNCLCYPGFLNSHNSDCIDVDE
CSTQRGLCRNGQCVNTVGTFLCVCHDGYELTLDGRLCADINECAVNPGTCGAGTCLNLDG
SYRCICPPGYYLHEETCEDIDECSQSPEMCIFGTCSNTEGSFTCLCPEGFQISASGRRCL
DIRVNYCYTKFDSGRCLAPKPQNTSKAACCCTGMPGQGWGDPCEICPSKGEEGYPLLCPN
EGYQQGTDDAPKDIDECINDPCINGQCINTDGSFRCECPMGYRLDNSGVRCEDINECEIG
NPCGNGTCTNVIGGFECACDDGFEPGPMMTCEDINECAQNPLLCAFRCVNVYGSYECKCP
TGYVLREDKRMCKDQNECEDGIDDCASRGMTCKNLIGTYMCICSPGFTRHPSGEGCMDLN
ECTAKPGTCKNGRCENTVGSYRCRCDQGFVANPTQTECIDNREGFCFTEVLTTLCQMTSS
NRNLVTKSECCCDGGRGWGTNCELCPLPGTTQYKKMCPLGPGYTTDGRDIDECRVMGNLC
KNGQCINSLGSYSCTCKPGYTTDISSTHCVDVDECIQAPKPCNFICKNTEGGYLCSCPRG
YILQEDGKSCKDLDECSSKQHNCQFLCVNTIGGFTCKCPPGFTQHHTACIDNNECASDPG
MCGSNGACQNTPGSFNCDCQRGFSLDPNGQSCEDMDECDGNHRCQHGCQNLVGGYRCSCP
QGYLQHYQWNQCVDENECMNSQICGGASCHNTLGSFRCLCPTGFNYEQAGGCADINECST
SQNPCKFGCSNTDGGYLCGCPNGYFRAGQGHCITGLGFTSGGPSGGEGAEADDNSLSPEA
CYECKINGYPKKGRKRRSTNSTQEDPIEDNQLTEEVVSLASLDIEDTLQLHLNISDLSNR
DHILEFTPALSALSEHVRYSIDYGNDEGYFKINQREGVSYLHMSKKKSLPPGAYDLQISS
VSLYKTKDLAELEDQHDKDYLTGQLGDILKMRVQLILH
NT seq
8757 nt
NT seq
+upstream
nt +downstream
nt
atgtcggacagtaaggttggaggcgcgcggctgcagcagctggccgtggccctggtggcc
ctgttgtcgctgtgcgccgagctgagggacgcggccgaggtggtggtggtggacaccggg
gacagcgagccggtcaccaagcagacccagagcagggccaagaggagggggggctcggac
gtcctcagaggaccgaatgtgtgtggctcgaggaacaacgcctactgctgcccgggctgg
aagactctgacgggaggaaaccagtgtattgttccgatctgccggagttcatgtggagat
ggtttctgctccagacccaacatgtgcacctgtcccaacggccagatctcagcatcctgt
ggatccaagtcagtccagcactgtaatatccgttgtatgaacgggggaacatgtgctgag
gataactgccagtgtcagaaaggctacgtgggaaaccactgcggtcaaccggtttgtgag
aatggctgccttaatggaggaaggtgtgtggctcccaacagatgtgtctgcacctatggc
ttcaccggggctcagtgcgaaagagactatcgcactgggccgtgttttgcctctgtgaat
aaccagatgtgtcaaggccagctcacaggcatcgtgtgcacaaagacgttgtgctgtgcc
acagtggggcgggcatggggtcacccctgtgagatgtgtccagcccagcctcacccctgc
agaagagggttcataccaaaccaccgcaccggggcgtgccaagatgtggacgagtgccag
gccatccctggcatctgtgcgggaggaaactgtatcaacacagtgggatcctttgaatgt
aaatgtcccgccgggcacaagttccacgaggtcacacagaaatgtgaagatctggacgag
tgttcgaacattccaggtctatgcggtataggtgaatgttctaataccgctggtagcttc
ttctgcaagtgtccccaggggtatcactcctctttggacggatccaggtgtatagatgct
cgcggtggctactgctactctggtgtgctgaatgggcgctgcgccaatcaaaactcgcag
ctgctgaccaaaatgcagtgctgctgtgacagtggacgctgctggtctgacggctccacg
cctgagatgtgccccgttcgtgcaacagaagagtaccagaaactgtgtttccagatacct
gatgggaacggcggagtgccggtacctggtcgtgtcccagggagtcccaacctacccagc
atctacccagttccatatcctggccaaactcctggccagatacctggagttatccctggt
caaattcccatccaggttccaggacaaggaccgggtcagattccaatacaatatccagga
ccatatccaggcccatatccaggacaatatccaatactatttccaggacatttaccgata
cagcctccgccaggtcctgctatcatccaaacccagaacatcaccaacatgtgccaggcc
taccgcaacctctgcctgaatggcaggtgcatccccatgccgggcattgggtatcgctgt
gagtgcaacatggggttcagtttggatggaaggggagagtgcgtcgatgacgatgagtgt
gagagaaacccatgtgcacatggagagtgtgtgaacacgcccgggtcttacatctgtcag
tgtcctgttggattccagaccactgccaccaggacagagtgccgagatctggatgagtgt
gtggccaacggtcgtatctgcaacaatggccgctgtgtgaacactgagggcagcttccac
tgtgtctgcaatgctggatttgaaattacagcagatggcaaaaactgtcaagaccaggac
gagtgtctgatcaggaacatgtgtctcaatggactgtgcatcaacgaggacggcagcttc
aagtgcatctgcaaacctggattcctccttgacagcagtggacgcatgtgtgtagacatc
gatgagtgcgagactccaggcatgtgcatgaacggccactgcgtcaacacggagggatct
ttccgctgcgagtgtatggccgggatggcggtgggcctggacggacgagtctgtgtcgac
acacatatgcgcagtacgtgttatggtggctacaagcgaggacagtgtgtacggccgtta
ttcggagccgtgaccaagtcagagtgctgctgtgccaccacagagtacgcctacggggag
ccctgccagccctgcccgccacaaagctctgctgagttcctggtactctgccccaacagc
atcggcgtcaccggcgatgggagagatattaacgagtgcgccctcgaccctgaaatgtgc
cagaatggagtgtgcgagaatatgctgaggacgtacaagtgcacctgcaatgacggtttt
gaagtcgacctcacaggcaaaaattgtgtcgacatcgacgagtgtctgatgaacaggctg
ctctgtgataacgggctgtgcaggaacacaccaggcagtttcacctgccagtgtcctaaa
ggataccgcttcaatccggcaagcgatgtctgcgaggatgtgaatgagtgtgagtccagc
ccctgtattaatggagaatgtatgaacagccaagggtcctttgtgtgtttgtgcacaatg
ggcagttcgttggacagctcggcgctggagtgtatcgagacaacaaaaagcacctgttgg
ctgaaaatagtcaacaatcgctgtgaggtcaacatcaacggggcgacactgaagtcccac
tgctgctccacactgggagaggcctggaacagcccgtgtgccaaatgtgaaaaagatcca
atctgcgggaaaggtttttctcgagcaagaggaaatgtgtgcgaagatgtggatgaatgt
caagtgtttcctggggtgtgtatcaacggcaagtgcatcaacacaccaggctccttcttc
tgccagtgccctccaggaatgactgttgatgtcagcggcaggacgtgtattgacctgcgt
acggagcagtgttacctcacccatgaggacgagcgctgcggggctcccatcccagggaag
caccgtgtggacgcctgctgctgctccgtgggcgtggcctggggccccgactgcgacgaa
tgtccagaaaagggcggtaccgactatacacggctctgtcctcggggcccaggcttctca
cacaggggggacttcatcaacggccggccctttctaaaagatattaatgaatgcaggatg
ataaacaccctgtgctcgaatgggaggtgcagaaacaccatcggcagcttccgctgtcgc
tgtgacagcggctatgccctggactctgatgagcggaattgtactgacatcgaggagtgc
cgcatctctccggacctgtgtggtcagggcaggtgtgtcaacacagcgggggattttgag
tgcgagtgctttgagggttacgagagcggcttcatgatgatgaagaactgcatggacatc
gatgagtgtgagaggaaccctctgctgtgccgcgggggcgagtgtgtaaacacggagggc
agcttccagtgcgtgtgccccgatggacacgagatcgcaccggacggctcggcatgtctc
gatatcaatgaatgcgagttgagtgacaggctgtgcaggaacggccagtgtgtgaatatg
atcggccgataccagtgtacctgcgacacgggatacaaatccactgagagcagactggag
tgtgttgacatcgacgagtgcaccattgagttcggtggctgtgagactttctgcaccaac
tcagagggcagttatgagtgcagctgcaacagtggatacgccctgatgcctgatctaaga
agctgcactgatattgatgagtgtgaggagaacccagatacgtgcgacggaggccagtgt
acaaacaccccggggacgtaccagtgtctctgcttcgacggcttcatgtcatccgaggat
atgaaaacctgtctggatgtggacgagtgtgagctgaacccaaacatctgtctgagtggg
aactgtgagaacactaagggatcgttcatctgccactgcgaactgggatactctgtgcgc
aagggaacgacaggctgcacagatatcaatgagtgtgagattggagcccataactgtgac
agacatgctacctgcaccaacaccgccggcagcttcaaatgcagctgtggtccagggtgg
atcggcgacggcctcaaatgcacagacctggatgaatgttccaatgggacacacatgtgc
aacaacaacgctgactgtctcaacactctgggctcatatcgctgtgcgtgcaaggatgga
ttctctggagacggattctactgctcagacagcgatgagtgcgcagataacggcaacctg
tgtgagagcggccactgtctgaacctgccaggaggcttccgctgtgaatgtgacatgggc
ttcttccccactactgacggcaaggcctgcgaggacatagacgaatgtaccttttctgac
atctgtgtcaatggacgatgtcagaacatgccaggacttttcagatgtgactgcaacttt
ggttatgagctggacaggagtggaggcaactgcacagatatcaatgaatgtgcagacccg
actatctgcatcaatggaatgtgtatcaacatccctggaaattaccactgtaactgccca
ccagactttgaactcaaccccactcgggtgggctgtgtagatactcgctctggaagctgc
ttcctggatgttcgttctcgaggagatgcgtcagagagcttggactgctccaatgagata
ggagttggtgtttcgaaggcgtcctgctgctgctccctgggccagggctggggaaatcca
tgtgaatcatgcccctacgtcaactcaactgagtacaagacactctgtcctggaggagaa
ggcttcagaccaaacccaatcactgtcatcttggaagacatcaacgagtgccaagagttg
ccaggcttatgccagggaggacagtgcatcaacacctttgggagcttccagtgtgaatgt
ccgagaggctacgccctcaacacagaaaccagagtctgtgaagatgtcaatgagtgtgag
cgaccaggtatctgtggcccaggccagtgctacaacaccatcgggaactacacctgcatc
tgtcctgtggactatatgcaggtcaacgggggaaacaactgcatggacatgaggaagagc
tactgctacagaaacttttactccgacaaccggacatgtgagggagagctgacctacaac
atgaccaaaaagatgtgctgctgctcctacaacattggccgggcatggaataaaccctgt
gagcagtgtcctgtgcccagcactgatgattttgcgattctgtgcggcagtgtgagacca
ggatattacatcgacatcaccactggacgggtcattgatattgatgagtgcagggaaatc
ccaggagtctgtgagaatggagtctgcatcaacatgattggcagcttcaggtgcgagtgc
cccattggtttcatctacaatgacaagctgctgatttgtgaagatatcgacgaatgtcag
aatggacctgtgtgccagcagaatgccgcctgtctgaacgtgccaggaagcttccgctgc
gagtgtaaatctgggtatcgttccactcccaccggacaatgtctagaccgtaatgaatgc
attgagaactctggtatatgcaacccgggtcagtgcatcgacacgctgggtagctatcgc
tgcatctgccccaacggctttaaaacgacgcgggaccagtcaatgtgtgtcgacgtggac
gagtgtgagagacaaccctgcggtaacgggacctgtaagaacacagtgggctcctacaac
tgcctctgctaccccggcttcctgaactcacacaacagtgactgcatagatgtcgatgag
tgttcgacgcagcggggcttgtgtcgaaacggccagtgtgtgaacacagtgggcaccttc
ctctgcgtgtgccatgacggctatgagctcactctcgatggcagactgtgtgcagatatt
aatgagtgtgcagtgaatccaggcacatgcggtgcaggaacttgtctgaatctggacggc
tcctacaggtgtatctgtccacccggctactatctgcatgaggaaacctgtgaagatatc
gacgagtgctcccagtcacctgagatgtgtatatttggaacctgctcaaacactgaagga
agcttcacctgcttgtgtcctgaaggcttccagatctctgcctccggacgcagatgttta
gatatccgtgtgaactactgctataccaagtttgatagtggccgctgcctggctccaaag
cctcagaacacttccaaggcagcgtgctgctgcactggaatgccaggtcaaggctgggga
gacccctgtgaaatctgcccgagcaagggagaggaggggtatcctcttctctgtcccaat
gagggatatcagcaggggacagacgacgccccaaaagatattgatgaatgcatcaacgac
ccttgtatcaacggccagtgcatcaacacagacggctctttccgctgtgaatgtcccatg
ggataccgcctggacaatagtggagtcagatgtgaagacattaatgagtgtgaaatcggg
aatccttgcggcaacggcacatgcaccaatgtcatcggtgggttcgaatgtgcgtgtgat
gacggctttgagcccgggccaatgatgacctgcgaagacatcaacgagtgtgcccagaac
cctctgctgtgcgccttccgctgtgtgaacgtgtatggctcgtacgagtgtaaatgtccc
acgggctacgttctgcgcgaggacaagaggatgtgtaaagatcagaatgagtgtgaggat
ggtatcgatgactgtgccagcagaggcatgacctgcaagaatctgatcgggacatacatg
tgcatctgttcgcctggattcacacgccatcccagcggagagggttgcatggatctgaac
gagtgtacagccaaaccagggacctgtaagaacggccgctgtgagaacacagtgggaagc
taccgctgcagatgtgaccaaggtttcgtcgctaaccccacacagactgaatgtatcgat
aaccgtgaaggcttctgcttcactgaggtcctgaccactctgtgtcagatgacgtcgagc
aacaggaacctggtgaccaagtccgagtgttgctgtgatggaggccgaggctggggcacc
aactgtgaactgtgcccgctgcccgggaccacccagtacaagaagatgtgtcccctggga
cctggatacaccactgatggcagagatatcgacgagtgtcgcgtcatggggaacttgtgc
aagaatggtcagtgcatcaactctttgggctcctacagctgcacctgcaaacccggctac
accaccgatatcagcagcacgcattgtgtggatgtggatgagtgcatccaggcaccaaag
ccctgtaacttcatctgtaagaacacggagggaggctacctctgttcctgcccccgcgga
tacatcctgcaggaggatggaaagagctgcaaagatctggacgagtgttcgtccaaacag
cacaactgtcagtttctatgtgttaacaccatcggtgggtttacgtgtaaatgtccccct
ggcttcacccagcatcatactgcctgcatcgacaacaacgaatgtgcctctgaccccggc
atgtgtggctccaatggcgcctgccagaacacgccggggagcttcaactgcgactgccag
cgaggattctcgttagatcccaacggacaaagctgtgaagatatggacgagtgtgatgga
aaccacaggtgccagcatggctgccaaaatctggtgggtggatacaggtgcagctgtcct
caaggctacctgcagcactaccagtggaaccagtgtgtggacgagaacgagtgcatgaac
agccagatctgcgggggagcgtcgtgccacaacaccctggggagcttccgctgcctctgc
cccactggcttcaactacgagcaggccggaggctgcgcggacatcaatgagtgctccacc
agccagaacccctgcaagttcggctgctccaacacagacggcggttacctctgcggctgt
cccaatgggtacttccgtgcaggacaagggcactgcatcacgggtcttggctttaccagc
ggcggccccagcggtggagaaggagctgaggcggatgataactccctgtctcctgaggcc
tgctatgaatgtaagatcaatggttatcccaagaagggacgcaaacgtcgcagcaccaat
tcaacccaagaggatcctattgaagacaaccagctgactgaggaggtggtaagtctggcc
agcttggacatcgaggacaccctgcagctccacctcaacatcagcgacctgagtaaccgc
gaccacatcctggagttcaccccggccttgtccgcgctcagcgaacacgtgcgctacagc
atcgactacggaaacgacgaaggctacttcaagatcaaccagagagagggcgtcagctac
ctgcatatgagcaagaagaagtccctccccccgggggcgtacgacctgcagatcagcagc
gtgtccctctacaagaccaaggatctggctgagctggaggaccaacacgataaagactac
ctcacaggacagctgggagacatactgaagatgagggtgcagctcatcctccattaa
DBGET
integrated database retrieval system
