Hippoglossus stenolepis (Pacific halibut): 118113203
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Entry
118113203 CDS
T08308
Symbol
cd4-2.2
Name
(RefSeq) CD4-2 molecule, tandem duplicate 2
KO
K06454
T-cell surface glycoprotein CD4
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Pathway
hsp03250
Viral life cycle - HIV-1
hsp03260
Virion - Human immunodeficiency virus
hsp04060
Cytokine-cytokine receptor interaction
hsp04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
118113203 (cd4-2.2)
03260 Virion - Human immunodeficiency virus
118113203 (cd4-2.2)
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
118113203 (cd4-2.2)
04514 Cell adhesion molecules
118113203 (cd4-2.2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
hsp04090
]
118113203 (cd4-2.2)
CD molecules [BR:
hsp04090
]
Proteins
118113203 (cd4-2.2)
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Gene cluster
GFIT
Motif
Pfam:
Ig_3
ig
Ig_2
V-set
I-set
C2-set
C1-set
Motif
Other DBs
NCBI-GeneID:
118113203
NCBI-ProteinID:
XP_035018580
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All DBs
Position
8:18246892..18262157
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AA seq
462 aa
AA seq
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MERFVLILFPALISTSGASKSVYAQVGGRVVLKPPAINTYKYVYWRFAKEDGLQLAWRNH
LGGTGINKDEPWTNKLTLPDESLVITNLQPENFGTYFCEITSGSQTLPIHSIELIKLNVS
VSPAEPLLPGESLSLSCTAGYRKKPEIYWLNPRGERIKNNQGTVTVRVTSQDDGMWICVV
AEEKQVKMPVKVVGLSPAPLVPHYTSTSSPITVPCSIPPLITWEQIKAKGIHEVHWQFFP
ETSSGLISQDAQRLFSLSLAGPLSWKRDQHRGLSPARDPKTGNLDLTRKLARVEDRGDYM
CTMKFKNGRTLNRTVHVEVLQIISSPGPHLLSGQQLNLTCSVGQPLPSDLHLQWFRPKQS
AQPGLKSARLTIPEVSTDDGGQWECGLLQGETRLTSAAITLTIEPKLSVWMLVISCSAAA
IVSLLLLILGLIIHRRRRRKMRHLRPQLCRCKKPKPKGFYRT
NT seq
1389 nt
NT seq
+upstream
nt +downstream
nt
atggagaggtttgtcctcattctcttccctgccctcatctcaacatcaggtgccagtaag
tcagtttatgctcaggtaggaggtcgggtcgtcctaaagcctccagcgattaacacatat
aaatatgtgtactggaggtttgctaaagaggatggccttcaacttgcctggcgcaatcac
ttgggtggaacgggcatcaataaagatgaaccctggacaaataagttgaccttgcctgac
gaatcactggtcatcaccaacctccaaccagaaaactttgggacgtacttttgtgaaatt
acctcggggagtcaaactttacctatccattccatcgaacttatcaaactcaacgtgagt
gtgagcccagccgagcctctgctgcctggagaatctctgtctctgtcctgcaccgcaggt
tatcgcaagaagcctgagatctactggctgaatcccagaggagagagaattaagaacaac
cagggaacagtcactgtgagagtcacaagccaagacgatggcatgtggatctgtgtagtg
gcagaagaaaaacaggtcaaaatgcctgtaaaggttgtgggcctttctccagctccttta
gttcctcactacacgtctacatcctcacccatcactgtcccctgttcgattcctcctctc
atcacctgggaacagatcaaagctaagggcatccatgaagttcactggcaattcttcccc
gaaacatcatcaggcctcatttctcaagatgcccagaggctcttctccctctcactggct
ggtccgctgagctggaagcgagaccaacaccgaggtctgagtcctgcacgagaccccaaa
acaggaaatctggatctgactagaaagctggccagagtagaagacagaggggactacatg
tgcactatgaaatttaaaaatggccggaccctgaacaggacggtacacgtggaggtgttg
caaatcatctcctcaccaggaccacacctcctctctggccagcagctcaacctgacgtgc
agcgtgggccaaccgctgccctctgacctccatctgcagtggttccgacctaaacaatca
gcccagcctggtctgaaatctgcccgtctcaccatcccagaagtgagcacggacgatgga
ggacagtgggagtgtgggctgttgcagggtgagacgcggctgacgtcggctgcgataacg
ttgacgatagaacccaaactgagtgtgtggatgctggtgatctcatgcagcgctgcagcc
atcgtgagcctcctcctcctcatcctcggtctcatcatccaccgacgcagacgtcggaag
atgagacacctcaggcctcaactctgccgatgcaaaaaacccaagcccaaaggattctac
agaacatga
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