KEGG   Hippoglossus stenolepis (Pacific halibut): 118113438
Entry
118113438         CDS       T08308                                 
Name
(RefSeq) tropomyosin alpha-3 chain
  KO
K09290  tropomyosin 3
Organism
hsp  Hippoglossus stenolepis (Pacific halibut)
Pathway
hsp04260  Cardiac muscle contraction
hsp04261  Adrenergic signaling in cardiomyocytes
hsp04814  Motor proteins
hsp04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:hsp00001]
 09140 Cellular Processes
  09142 Cell motility
   04814 Motor proteins
    118113438
   04820 Cytoskeleton in muscle cells
    118113438
 09150 Organismal Systems
  09153 Circulatory system
   04260 Cardiac muscle contraction
    118113438
   04261 Adrenergic signaling in cardiomyocytes
    118113438
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:hsp04812]
    118113438
Cytoskeleton proteins [BR:hsp04812]
 Eukaryotic cytoskeleton proteins
  Actin filaments / Microfilaments
   Actin-binding proteins
    Tropomyosins
     118113438
SSDB
Motif
Pfam: Tropomyosin FKBP15 CCDC39 DUF3450 Laminin_II TMF_DNA_bd CENP-F_leu_zip PUMA_CC TPR_MLP1_2 DUF1664 DUF4200 Sec2p Fib_alpha MscS_porin Lebercilin CALCOCO1 TMEM120A-B CC_Bre1 BRCA2 DUF724 Csm2_III-A BST2 XhlA DUF745 HAUS1 EzrA Vps53_N FPP Snapin_Pallidin ODAD1_CC AAA_13 Laminin_I Noelin-1 CLZ Sec20 Sec10_N
Other DBs
NCBI-GeneID: 118113438
NCBI-ProteinID: XP_035019034
LinkDB
Position
8:complement(26823107..26828562)
AA seq 250 aa
MSGGGVNSIDAVKKKIKVLQDQAEDAEERAERLQKEVEKEKRSREEAEAEVTALGRRLQL
SEENLDRAQERLSTALHKLDEVEKVADESERGMKVIENRALKDEEKMEHLEVQLREAKQI
AEEADRKYEEVARKHLMLEGELERAEDRAERAESNVRRLEEQLRSFDQSLKSLQATEDKY
SQKEDRYEEEIKNLSGKLKEAESRAECAERSVAKLEKAIDDLEDTLTSARNANMELQATL
NQTMEELNSC
NT seq 753 nt   +upstreamnt  +downstreamnt
atgagcggaggaggagtgaacagcatcgatgcagtgaagaagaagatcaaggttctgcag
gatcaggcagaggatgccgaggagagggcggagcgactgcagaaggaggtggagaaggag
aagaggagcagagaggaggcggaggcggaggtgacagctctgggtcgtcgtctgcagctg
agtgaggagaatctggaccgagctcaggagagactctccactgccctccataaactggac
gaggtggagaaggttgccgacgagagcgagagaggtatgaaggtgatcgagaacagagct
ctgaaggacgaggagaagatggagcatctggaggttcagctcagagaagccaaacagatt
gctgaggaggccgaccgcaaatatgaagaggtggctcgtaaacatctgatgttggaagga
gagctggaacgagctgaagacagagcggagcgggctgagagtaatgttcggaggctggag
gagcagttgaggagttttgaccaatcactgaagagcctgcaggcaactgaggacaagtat
tctcagaaagaggaccggtatgaagaggagatcaagaacttgagtggaaaactcaaagag
gccgagagcagagcggagtgtgccgagcggtcagtggccaaactggagaaagccattgat
gacctggaagatactttgacttcagccagaaacgccaacatggagcttcaggcgactctg
aatcagactatggaggaactcaactcctgctga

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