Hippoglossus stenolepis (Pacific halibut): 118113532
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Entry
118113532 CDS
T08308
Symbol
setdb1b
Name
(RefSeq) histone-lysine N-methyltransferase SETDB1-B isoform X1
KO
K11421
[histone H3]-N6,N6-dimethyl-lysine9 N-methyltransferase [EC:
2.1.1.366
]
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Pathway
hsp00310
Lysine degradation
hsp01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
118113532 (setdb1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
hsp03036
]
118113532 (setdb1b)
Enzymes [BR:
hsp01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.366 [histone H3]-N6,N6-dimethyl-lysine9 N-methyltransferase
118113532 (setdb1b)
Chromosome and associated proteins [BR:
hsp03036
]
Eukaryotic type
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
118113532 (setdb1b)
Heterochromatin formation proteins
Other heterochromatin formation proteins
118113532 (setdb1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tudor_4
DUF5604
Tudor_5
SET
MBD
Pre-SET
Chromo_MORC2_6th
Motif
Other DBs
NCBI-GeneID:
118113532
NCBI-ProteinID:
XP_035019218
LinkDB
All DBs
Position
8:16892260..16904025
Genome browser
AA seq
1325 aa
AA seq
DB search
MENSERMEVEGWDPSLEEELGVSLDELKKWIEETVEQSEIVRKKKAQLTELKDWVEQKEK
EGAITEVLLKDTNKSLLECEKLVKATYQKNGLVYRENSSDDEGSGGGVLSSEVIEIDDDD
DDDVIAVGCLVPPKKSGTPGKDAALKEASAALQKTSQQVQKLVQMVNKPSSGVSLLRPPG
QFSSQSGIQSAVPAVFVSQVPSQSITQPNPNVTEDELLVGMTILGKKRTKTWHRGALVAI
NPVGNGIFKYKVKFDKGKSLLSGNHVAFEYNPTLESLYVGARVVAKYKDGNLVWLYAGIV
AEMPNNKNRMRFLIFFDDGYASYVKLTELYPVCRPLKRTWEDIEDASCRDFIEEYITAYP
SRPMVLLKVNQIIKTEWEGTWWKSKVEDVDGSLVKILFLDDKRSEWIYRGSTRLEPMFNL
KMTTANTQEKKLAGQQRTRPNMGVLRSKGPVVQYTSDGHVGASPVKAPPATLSPPSQPPQ
LQQRPQLPQPQQIQQTQQTQQIQQIQPIQQIQQIQPIQQIQQIQPIQQIQQIQQIQPIQQ
IQQIQQIQQIQQIQQIQQIQPIQPIQTIQPIQPIQPTPQSPQSPHPAQSLRVDNKHQMAK
KSTSPFVPGVGGTHASKVMQSLSQSPSNLPAGRILIAPNTPTATFAQAFQRQVLSVTPVP
PHMIHALASIPQHPSYRAPTDRIFYMAHTCQPACLNRVRPAKPDLHSGKNPLLTPLLYDF
RRMTGRRKVNRKMSFHVIYKAPCGLCLRNMGEIQHYLFQTHCDFIFLEMFCLDPYVLVDR
PFQPQRPFYYIPDITGGREDIPLSCVNEIDSTPPPKVDYSKERIPEDGVYINTGADFLVG
CECTDGCRDKSKCSCHQLTLQATGCTPGAQINTNAGFSHKRLEECLPTGIYECNKRCKCC
AAMCTNRLVQHGLQVRLQLFKTQNKGWGIRCLDDVAKGSFVCIYAGKILTDDFADREGLE
MGDEYFANLDHIESVENFKEGYESEAHCSDSEGSGVDVARIKIQPSALASSNAVPPGKGE
SKSSAQSPTSSGDSNEEEEKDSKSEDESDSSDDTFVKDNYFSSSSVWRSYTTRGQVKGNK
EGSQDSKDELSASVKGTDEQKPPSMPEETGKSKVASWLTSQGMKRESGDNKSQVKPETGK
KQDVMTLSDSDDVQTISSGSEDNKEREKVTPGVTKKQVAVKSTRGIALKSSHGMMVKTGA
PGGGGGPGGQGGKTGQQGPTGGGGDNSHRNTRLFFDGEESCYIIDAKLEGNLGRYLNHSC
SPNLFVQNVFVDTHDLRFPWVAFFASKRIRAGTELTWDYNYEVGSVEGKVLLCCCGSTEC
RGRLL
NT seq
3978 nt
NT seq
+upstream
nt +downstream
nt
atggaaaacagcgagaggatggaggtggagggttgggaccccagtctggaggaggaactg
ggcgtttctctggatgagctgaagaagtggattgaagagactgtggagcagagcgagatc
gtgcggaagaaaaaggctcagctgacggagctgaaagattgggtggagcaaaaagagaaa
gagggggcaataacggaggtacttctcaaagacaccaacaagtccctattggagtgtgag
aagctggtgaaggcgacctaccaaaagaatggtctcgtttaccgagaaaacagctcagac
gatgagggtagtggaggaggggtgttgtcctctgaggtcattgaaatagatgatgacgat
gatgatgatgtcattgctgttggctgtttggttcctccaaagaaatctgggactcctggc
aaagatgcggcgttaaaagaggcgtctgcagctctacagaaaacctctcagcaggtgcag
aagttggtccaaatggtgaacaagccttcatcaggtgtttctttgctgcgacctccagga
cagttttcatcccagtcaggtattcagagtgcggtgccagcagtgtttgtatcacaggtc
ccatctcagtccataacccagccaaacccaaacgtgacagaggatgagcttctagtcggg
atgaccattctgggaaagaaacgcaccaagacgtggcacagaggcgccctcgtcgctatc
aaccctgttggaaacggtatcttcaagtataaagtgaagtttgataaaggaaagagtctg
ctgtctggaaatcatgtggctttcgaatataaccccacactggagagtttgtatgtcgga
gcccgtgtagtcgccaagtacaaggacggcaacctggtgtggctctatgctggaatcgta
gcagagatgcccaacaataagaaccgcatgaggtttttgatattctttgatgatggctat
gcttcatatgtgaagctaactgagctctaccctgtctgtcgaccattaaagcgtacttgg
gaagacatagaggatgcatcgtgtcgagacttcatcgaggagtacatcactgcttatccc
agcagaccgatggtgctgttaaaggtcaaccagatcatcaagacagagtgggagggaacc
tggtggaagagcaaagtggaggatgttgatggcagcttggtcaagatcctcttcttggat
gataagagaagtgagtggatctatagagggtccaccaggttggagccaatgttcaacctg
aagatgaccacagccaacactcaggagaagaagctggccggccagcagaggacacgaccc
aacatgggagtgttgaggagcaaaggcccagtggttcaatacaccagtgacggacatgtt
ggagcctctcctgtcaaagctccacctgccacactgagtccaccttcacagccaccacaa
cttcaacagcgtccacaactgccacagccccaacaaatccaacaaacccaacaaacccaa
caaatccaacaaatccaacctattcaacaaatccaacaaatccaacctattcaacaaatc
caacaaatccaacctattcaacaaatccaacaaatccaacaaatccaaccaattcaacag
atccaacagatccaacagatccaacagatccaacagatccaacaaatccaacagatccaa
ccaatccaaccaattcaaacaattcaaccaatccaaccaatccaaccaaccccccagtcc
ccacagtccccacatcctgcacagtctctacgtgtcgacaataaacatcagatggcaaag
aagagcacttccccgtttgtccctggggtgggaggaacacatgcctccaaagtcatgcag
tcactttcccagagtcccagcaacctgcctgccggaagaatattgattgctccaaatact
cctacggccacgttcgcacaagcgtttcagagacaggtgctatctgtcactcccgtcccc
cctcatatgattcatgcgctggccagcatcccacagcatccctcataccgtgccccgacg
gaccgcatcttctacatggctcacacgtgtcagcctgcctgtctgaatcgtgtccggccg
gcgaaacctgacctgcacagtggaaagaaccccctcctcactcctttattgtacgatttc
agacgcatgacaggacgacgcaaagtcaaccgcaagatgtccttccatgtgatctacaag
gctccgtgtgggctttgtctgcgtaacatgggagagatccaacattacctcttccagacg
cactgtgacttcatcttcttagagatgttctgtctagacccctacgtactcgtggaccgt
cctttccagccacagaggccattctattacattccagacatcacaggtggaagggaggac
atcccactgtcctgcgtcaatgagatcgattccactccgcctcctaaagtagactacagt
aaagaacgtattcctgaagatggagtatatatcaacaccggtgcagacttcctggttggg
tgcgaatgcactgacggctgtcgagacaaatccaaatgctcttgtcaccagctgaccctt
caggccacaggttgtacaccaggcgcgcagatcaacacaaatgccggattttcgcacaaa
cgattagaggagtgcctgcccacagggatctacgagtgtaataagcggtgcaaatgttgt
gctgcgatgtgcactaaccggcttgttcagcacggcctgcaggtgcgtctccagctcttc
aagacccagaacaaaggctggggcatccgctgtctggacgatgtggccaagggctctttt
gtctgcatctatgctggtaaaatcctgacggacgactttgccgacagagagggtctagaa
atgggtgatgagtattttgccaatctggatcatatagagagtgtggaaaacttcaaggag
ggctatgagagcgaggctcattgttcggacagcgagggaagcggtgtggacgttgccagg
ataaaaatccaaccatctgctttagcatcctctaacgctgtgccgcccgggaagggtgag
tccaaatcctcagcccaaagcccgacctcatcaggagacagcaatgaagaagaggagaaa
gactccaagagtgaagatgaaagtgacagttcggacgacacgtttgtaaaggacaactac
ttcagctccagctctgtgtggaggagttacacaacacgtggtcaggtcaagggcaacaag
gaagggagtcaagacagcaaagatgaattgagtgcgtcagtcaagggaaccgatgagcag
aagcccccgtccatgcccgaggagacggggaaaagcaaagtagcatcctggctgacgagc
caggggatgaagagggaatccggagacaacaagagtcaagtgaagccagaaacagggaag
aagcaggatgtgatgactctgtcagacagcgatgatgtgcagaccatcagctctggatct
gaagacaacaaagagagagagaaagtaactccaggtgtgactaagaagcaggtagcggtt
aaatccacccgtggcatcgccctgaagtccagccacggtatgatggtgaaaacaggtgca
cctggaggcgggggagggccagggggtcagggaggaaagacagggcagcagggaccaact
ggaggaggcggggacaactctcacagaaacacgcgcctgttctttgatggtgaggagtcg
tgctacatcattgatgccaagttggagggaaaccttgggcgatacctcaaccacagctgt
agtccaaacctctttgtccagaatgtgtttgtggacacacatgatttgagattcccgtgg
gtggcgttctttgccagcaagcggatccgggccgggacagaactgacctgggattacaac
tacgaggttggcagtgtggagggtaaagttctgctctgctgctgcggatccactgagtgc
agagggaggttgctttaa
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integrated database retrieval system
