KEGG   Hippoglossus stenolepis (Pacific halibut): 118114391
Entry
118114391         CDS       T08308                                 
Symbol
si:dkey-199f5.8
Name
(RefSeq) beta-1,4-galactosyltransferase 3
  KO
K07968  beta-1,4-galactosyltransferase 3 [EC:2.4.1.90 2.4.1.38 2.4.1.-]
Organism
hsp  Hippoglossus stenolepis (Pacific halibut)
Pathway
hsp00510  N-Glycan biosynthesis
hsp00513  Various types of N-glycan biosynthesis
hsp00514  Other types of O-glycan biosynthesis
hsp00515  Mannose type O-glycan biosynthesis
hsp00533  Glycosaminoglycan biosynthesis - keratan sulfate
hsp00601  Glycosphingolipid biosynthesis - lacto and neolacto series
hsp01100  Metabolic pathways
Module
hsp_M00071  Glycosphingolipid biosynthesis, neolacto-series, LacCer => nLc4Cer
hsp_M00075  N-glycan biosynthesis, complex type
Brite
KEGG Orthology (KO) [BR:hsp00001]
 09100 Metabolism
  09107 Glycan biosynthesis and metabolism
   00510 N-Glycan biosynthesis
    118114391 (si:dkey-199f5.8)
   00513 Various types of N-glycan biosynthesis
    118114391 (si:dkey-199f5.8)
   00515 Mannose type O-glycan biosynthesis
    118114391 (si:dkey-199f5.8)
   00514 Other types of O-glycan biosynthesis
    118114391 (si:dkey-199f5.8)
   00533 Glycosaminoglycan biosynthesis - keratan sulfate
    118114391 (si:dkey-199f5.8)
   00601 Glycosphingolipid biosynthesis - lacto and neolacto series
    118114391 (si:dkey-199f5.8)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01003 Glycosyltransferases [BR:hsp01003]
    118114391 (si:dkey-199f5.8)
Enzymes [BR:hsp01000]
 2. Transferases
  2.4  Glycosyltransferases
   2.4.1  Hexosyltransferases
    2.4.1.38  beta-N-acetylglucosaminylglycopeptide beta-1,4-galactosyltransferase
     118114391 (si:dkey-199f5.8)
    2.4.1.90  N-acetyllactosamine synthase
     118114391 (si:dkey-199f5.8)
Glycosyltransferases [BR:hsp01003]
 Glycan extension
  Type 2 chain/Poly-N-acetyllactosamine
   118114391 (si:dkey-199f5.8)
  Glycolipid
   118114391 (si:dkey-199f5.8)
SSDB
Motif
Pfam: Glyco_transf_7N Glyco_transf_7C
Other DBs
NCBI-GeneID: 118114391
NCBI-ProteinID: XP_035020737
LinkDB
Position
8:complement(22254275..22272071)
AA seq 385 aa
MVTFQSKWRYMFMFLGIQLVVMALLSREGYQKRVNYFIRIFRKANTTAVSGRNHTAAGVI
GGDVYANLSHLPRTPSHGDDMPYCPKISPLIGGPIHVNFPSGLSLAEVQRKNPLVVRGGR
YRPPDCEARHRTAIIIPHRHREHHLKFLLYYLHPFLQRQQLNYGIYIIHQAGNYTFNRAK
LMNVGFREAMKEEDWDCLFFHDVDLIPEDDRNTYVCDGNPKHSAIAMDKFGYKLPYKMYF
GGVSALTPLHYLKMNGFPNNYWGWGGEDDDIGVRVSLGGMYISRPSVKVGRYKMIKHKLD
KGNDVNPKRFNMLAKTRQSWKSDGMNTAEYEILSRQYLPLYTNITVNIGTEDGLHPRPPA
SSAGKPAAKVPAEVKQKKESLTKDS
NT seq 1158 nt   +upstreamnt  +downstreamnt
atggtcactttccagtcgaaatggcgctacatgttcatgttcctgggcatccagctggtg
gtcatggcactgctgtcccgggagggataccagaagagggtcaactacttcatccgcatc
ttccgcaaggccaacaccactgccgtgtcaggccgcaaccacactgcagccggcgtcatt
ggaggggatgtctatgccaacctctcccacctacccagaactccgagccatggagatgac
atgccctactgccccaagatatcccctttgataggtgggccaatccatgtcaacttccca
tcagggctcagtctagcagaggtacagaggaaaaatcccctggtggttcggggaggacgt
tacaggccacctgactgtgaggccaggcatcgaactgccatcatcattccccacagacac
agggaacatcacctcaagttcctgctctactacctacacccttttctgcaacgtcagcag
ctcaactatggaatttacatcattcatcaggctggaaactacacgtttaacagagccaag
ctgatgaatgtgggtttccgggaggccatgaaggaggaggactgggactgtctcttcttt
cacgacgtggacctcattccagaggacgatcgcaacacatacgtctgcgatggcaacccg
aagcactccgccatcgccatggacaagtttggctacaagcttccatacaagatgtacttt
ggtggagtgtcagctctgacgccactgcattacctcaaaatgaacggttttcccaacaac
tactggggctggggtggagaggacgatgatatcggagtcagggtgtctctgggggggatg
tacatcagtcgtccatcggtgaaagtcggccgttacaagatgataaagcacaagctggac
aaaggaaatgatgtgaacccaaagaggttcaatatgctggccaagacgcgtcagagctgg
aagtcggatgggatgaacacagccgaatatgagatcctttcacggcaatacctgcccctc
tacacaaacatcacggtcaacatcggcactgaggacggtctacacccacgtcctccagca
tcatctgcgggaaaacctgctgctaaagtgccagcggaagtcaaacagaagaaggagtcc
ctcacaaaagacagctag

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