KEGG T08308: 118114726

Hippoglossus stenolepis (Pacific halibut): 118114726

Entry

118114726         CDS       T08308

Name

(RefSeq) actin, cytoplasmic

K05692

actin beta/gamma 1

Organism

hsp Hippoglossus stenolepis (Pacific halibut)

Pathway

hsp03082

ATP-dependent chromatin remodeling

hsp04145

Phagosome

hsp04210

Apoptosis

hsp04510

Focal adhesion

hsp04520

Adherens junction

hsp04530

Tight junction

hsp04810

Regulation of actin cytoskeleton

hsp04814

Motor proteins

hsp04820

Cytoskeleton in muscle cells

hsp05100

Bacterial invasion of epithelial cells

hsp05132

Salmonella infection

Brite

KEGG Orthology (KO) [BR:hsp00001]
09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    118114726
09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    118114726
  09143 Cell growth and death
   04210 Apoptosis
    118114726
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    118114726
   04520 Adherens junction
    118114726
   04530 Tight junction
    118114726
  09142 Cell motility
   04814 Motor proteins
    118114726
   04820 Cytoskeleton in muscle cells
    118114726
   04810 Regulation of actin cytoskeleton
    118114726
09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    118114726
   05100 Bacterial invasion of epithelial cells
    118114726
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:hsp03021]
    118114726
   03019 Messenger RNA biogenesis [BR:hsp03019]
    118114726
   03036 Chromosome and associated proteins [BR:hsp03036]
    118114726
   03029 Mitochondrial biogenesis [BR:hsp03029]
    118114726
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:hsp04812]
    118114726
   04147 Exosome [BR:hsp04147]
    118114726
Transcription machinery [BR:hsp03021]
Eukaryotic type
  RNA polymerase II system
   Coactivators
    BAF/PBAF complex
     118114726
Messenger RNA biogenesis [BR:hsp03019]
Eukaryotic type
  mRNA surveillance and transport factors
   Factors involved in mRNA localization
    Factors that have mRNA localization signals
     118114726
Chromosome and associated proteins [BR:hsp03036]
Eukaryotic type
  Histone modification proteins
   HAT complexes
    TIP60 complex
     118114726
    NuA4 complex
     118114726
  Chromatin remodeling factors
   BAF complex
    118114726
   PBAF complex
    118114726
   GBAF(ncBAF) complex
    118114726
   SWR1 complex
    118114726
Mitochondrial biogenesis [BR:hsp03029]
Mitochondrial quality control factors
  Mitochondrial dynamics
   Actin cytoskeleton organization
    118114726
Cytoskeleton proteins [BR:hsp04812]
Eukaryotic cytoskeleton proteins
  Actin filaments / Microfilaments
   Actins
    Actins
     118114726
Exosome [BR:hsp04147]
Exosomal proteins
  Proteins found in most exosomes
   118114726

SSDB

Motif

Pfam:

Actin DUF6581

Other DBs

NCBI-GeneID:

118114726

NCBI-ProteinID:

XP_047197070

LinkDB

Position

9:complement(28426393..28429455)

AA seq 374 aa
MDDENIALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGGEAQS
KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYKLRVAPEEHPVLLTEAPLNPKANREKMTQ
IMFETFNCPAMYVAIQAVLSLYASGRTTGIVMDSGDGVSHTVPIYEGYALPHAILRLDLA
GRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMQTAASSSTLEKSYE
LPDGQVITIGNERFRGPEALLQPSFLGMESSGIHETTYNSIMKCDVDIRKDLYANTVLSG
GTTMFPGIADRMQKEITALAPPTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQE
YDESGPTIVHRKCF

NT seq 1125 nt +upstreamnt +downstreamnt
atggatgacgaaaacattgccctcgttgttgacaacggctccggcatgtgcaaggccggc
ttcgctggggacgacgccccccgcgctgtgttcccatccatcgtcggccgccccagacac
cagggcgtgatggtgggaatgggacagaaggacagctacgtgggaggcgaggctcagagc
aagagaggcatcctgaccctgaagtatcccatcgagcacggcatcgtcaccaactgggac
gacatggaaaagatctggcatcacaccttctacaagctccgtgttgctcctgaggagcat
ccagtcctgctgaccgaggctccgctcaaccccaaggccaacagggagaagatgactcag
atcatgttcgagaccttcaactgtccggccatgtatgtggccatccaggccgtcctgtca
ctgtacgcctccggtcgtaccacaggtatcgtgatggactctggtgacggtgtcagccac
actgttcccatctacgagggctacgctctgcctcacgccatcctccgtctggacctggct
ggccgagatctgactgactacctgatgaagatcctcaccgagcgaggctacagcttcacc
accactgccgagcgtgagattgtgcgtgacatcaaggagaagctctgctacgtggctctg
gactttgagcaggagatgcagacagcagccagctcctccaccctggagaagagctacgag
cttcctgacggacaggtcatcaccatcggcaacgagaggttccgcggcccggaggcgctc
ctccagccgtcgttcctcggaatggagtcgtccggcatccacgagacaacttacaacagc
atcatgaagtgcgacgtggacatccgtaaggacctgtacgccaacaccgtgctgtccggc
ggcaccaccatgttccccggcatcgctgaccgcatgcagaaggagatcactgccctggcc
cctcccaccatgaaaatcaagatcatcgctcctccagagaggaagtactctgtctggatc
ggtggctccatcctggcctccctctccactttccagcagatgtggatcagcaagcaggag
tacgacgagtccggccccaccatcgtccaccgcaagtgcttctag

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