Hippoglossus stenolepis (Pacific halibut): 118115566
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Entry
118115566 CDS
T08308
Name
(RefSeq) platelet-derived growth factor subunit A
KO
K04359
platelet-derived growth factor subunit A
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Pathway
hsp04010
MAPK signaling pathway
hsp04020
Calcium signaling pathway
hsp04510
Focal adhesion
hsp04518
Integrin signaling
hsp04540
Gap junction
hsp04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
118115566
04020 Calcium signaling pathway
118115566
09133 Signaling molecules and interaction
04518 Integrin signaling
118115566
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
118115566
04540 Gap junction
118115566
09142 Cell motility
04810 Regulation of actin cytoskeleton
118115566
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
hsp04052
]
118115566
00536 Glycosaminoglycan binding proteins [BR:
hsp00536
]
118115566
Cytokines and neuropeptides [BR:
hsp04052
]
Cytokines
Growth factors (RTK binding)
118115566
Glycosaminoglycan binding proteins [BR:
hsp00536
]
Heparan sulfate / Heparin
Growth factors/receptors
118115566
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDGF_N
PDGF
DUF2112
Motif
Other DBs
NCBI-GeneID:
118115566
NCBI-ProteinID:
XP_035022702
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Position
2:complement(26002294..26011996)
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AA seq
199 aa
AA seq
DB search
MRAEVFHLLAGCLCLLRAAAEESPLPRELLERLSRSDIRSISDLQRLLELDSVENEVIEE
TKHIYHKDFSHSFLDLKSAHTHTRHRRSTVVEEALPAGCKVRTTIYEIPRSQVDPTSANF
IIWPPCVEVKRCTGCCNTSNMRCQAARKHHRTVKVAKVEYVRKRPKLREVQVKLEDHLDC
MCTNKRHISQNSDTDNGIR
NT seq
600 nt
NT seq
+upstream
nt +downstream
nt
atgagagccgaggttttccacctcctcgccggctgcctctgcctgttacgcgccgctgct
gaggagtctcctctcccccgggagctgttggagcggctctcccgcagcgacatccgcagc
atcagcgacctccagcggctgctcgagttagactccgtagagaacgaggtgatcgaggag
accaaacacatctaccacaaggacttctcccacagcttcctcgacctgaagagtgcacac
acgcacaccagacacaggcggagcactgtggtggaagaggccttgccagcgggctgcaaa
gtgcggacgacgatctatgagatcccccggagccaggtggaccccacgtcggccaacttc
atcatctggccgccctgcgtggaggtgaaacgctgcaccggctgctgcaacaccagcaac
atgaggtgtcaggcagctcgcaagcaccaccgcacggtcaaggtagcgaaggtggagtat
gtgcggaagcgcccgaagttgagggaggtgcaggtgaagctggaggatcatctggactgt
atgtgcaccaacaaacgccacatcagccaaaactcagacacagacaacggcatcaggtga
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