Hippoglossus stenolepis (Pacific halibut): 118116312
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Entry
118116312 CDS
T08308
Symbol
exd2
Name
(RefSeq) exonuclease 3'-5' domain-containing protein 2 isoform X1
KO
K20777
exonuclease 3'-5' domain-containing protein 2 [EC:
3.1.11.1
]
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hsp03400
]
118116312 (exd2)
Enzymes [BR:
hsp01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.1 exodeoxyribonuclease I
118116312 (exd2)
DNA repair and recombination proteins [BR:
hsp03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
118116312 (exd2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
RRXRR
Ribosomal_S14
Cytochrom_c3_2
Motif
Other DBs
NCBI-GeneID:
118116312
NCBI-ProteinID:
XP_035023790
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All DBs
Position
10:4195176..4201392
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AA seq
642 aa
AA seq
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MSHRGSLTAVVTTVLGATLGGLLIWRVYRTKRKRLPSVQKAADPVEAPPPLEAEVAAAKC
RCIQPQATGEKEFKAVECQTTQLPPPVRIPSEDLLGVKPVMVSSEEEWQQLWPLMQKELS
VFPVLGLDCEWVKTKGVSVKGHTSAVSLLQMASYSGLCVLVRLLPFRSSQQNFPLSFMEV
LRDPHILKVGVGCYEDGKRLTRDYGLSVTCTVDLRYLALRQRQAVTNGLSLKSLAADLLN
VSLDKSLELRCSDWEADQLTLEQMTYAARDAQVSIALFLHLLGLHSEARPDSTSGSSYSE
LASRCQGLVDVPFRGRGDGDDRAADKEKRRRTRKPPTYESPESGDQQVPDPRRNNKRKPL
GVGYSARKSPLYDNCFLYAPDGQPLCTCDKKKAKWYLDKGIGVLQSEDPFVVKLLFEPSG
RPDSQQDYYLTAKENLCVVCGKADSYIRKNIVPHEYRRHFPTEMKDHNSHDILLLCTSCH
AASNVHDGFLKQQLAEEFAAPQGCEEGVRLLEDSDRRRVRSAARALLTAGDGLPEQRRDE
LQVLIRGFLNMNERQELSDEALQHAASLETRIFNEAYVPHGLKLVQAHAGLGLQGLMDLE
RRWRQHFLSSMQPRHLPPLWSVDHNHSKFLRKYGEDLPIKLN
NT seq
1929 nt
NT seq
+upstream
nt +downstream
nt
atgtctcatcgagggtctttaactgccgtcgtaaccacagtgctcggggcgaccttggga
gggctgctcatatggcgagtttaccgaacgaagaggaagaggctgccttccgtccagaag
gcggccgatcccgtggaggctcctcctccgttggaagcggaggtcgccgccgccaagtgt
cgatgcatccaaccgcaggccaccggggagaaggagttcaaggctgtggagtgtcagacc
acacaactgccgcctcctgtgcggatcccgtcagaagacctgctgggggtgaaaccagta
atggtgagctctgaagaggaatggcagcagctgtggccgctgatgcagaaggagctgtcg
gtgttccccgttctcgggctcgactgtgaatgggtaaagaccaaaggcgtctctgtgaag
ggccacacctcggcggtctccctgttgcagatggcctcgtattcaggtctgtgcgtcctg
gtgaggctgctgccgttccgcagcagtcagcagaacttccctctcagcttcatggaagtc
ctcagagacccccacatattgaaggttggcgttggttgctatgaagatggcaaacgtctg
acgcgcgactacggtctgtccgtgacgtgcacggtcgacctgcgctacctggccttgaga
cagagacaagcagtgactaatggactcagtctgaagtccctggcagcagatctgttgaac
gtttctctggataaatctctggagctgcgctgcagtgactgggaggcagatcaactgacg
ctggagcagatgacttatgctgccagagatgctcaagtttccatcgccctcttcctccat
ctcctcggcctccactctgaagccagacccgactctaccagcgggagctcctactccgag
ttggcgtcccgctgccagggcctggtggacgtgcccttcaggggccgaggagacggcgac
gacagggcggcagataaagagaagaggcggcggacgcggaaacctcccacttatgaaagc
ccagagtctggagatcagcaagtcccagaccctcgacggaacaacaagaggaaaccgctg
ggtgtgggatattctgccaggaagtctcctctctatgataactgcttcctctacgctccc
gacggtcagcctctgtgtacctgcgacaagaagaaagccaagtggtacctggacaaagga
ataggagtgcttcagagcgaagatccttttgtggtgaagctgctgtttgagccgtcggga
cgtcctgactcccagcaggactactatctgaccgccaaggagaatctgtgcgtcgtctgt
ggaaaagctgattcctacatcaggaaaaacatcgtaccacacgagtacaggcgacatttt
cccaccgagatgaaggaccacaactcccacgacatcctgctgctctgcaccagctgccac
gccgcttccaacgtgcacgacggcttcctgaagcagcagctggctgaagagtttgccgcc
cctcagggctgcgaggagggagttcgcctgctggaggattcagaccgacggcgggtgcgg
tcggccgctcgggctctgctcaccgccggagacgggctgccggagcagcggcgagacgag
ctgcaggttctgatcaggggcttcctcaacatgaacgagaggcaggagctgagcgacgag
gcgctgcagcacgctgccagtttggagacgaggatcttcaacgaggcgtacgtgcctcac
ggcctgaagctggtgcaggcgcacgcggggctgggcctgcagggcctgatggacctggag
cgtcgctggaggcagcacttcctcagcagcatgcagccccgccacctcccccccctctgg
tccgtcgaccacaaccacagcaagttcctccgcaaatacggagaggacctgcccatcaaa
ctcaactga
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