Hippoglossus stenolepis (Pacific halibut): 118117014
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Entry
118117014 CDS
T08308
Symbol
bcl11ba
Name
(RefSeq) BAF chromatin remodeling complex subunit BCL11B a isoform X1
KO
K22046
B-cell lymphoma/leukemia 11B
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
hsp03000
]
118117014 (bcl11ba)
Transcription factors [BR:
hsp03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
118117014 (bcl11ba)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
zf-C2H2
zf-C2H2_4
zf-H2C2_2
zf-C2H2_16
zf-C2H2_15
zf-H2C2_5
DUF3268
Zn_SUZ12
Actin_micro
Motif
Other DBs
NCBI-GeneID:
118117014
NCBI-ProteinID:
XP_035024928
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All DBs
Position
10:25086606..25128930
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AA seq
838 aa
AA seq
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MSRRKQGNPQHLSQREITQIEHPDGSLLSDSLLPQSLGLPPHALEPSLAHALPPGLHADH
DLLTCGQCQVTFPLGDILLFIEHKKKQCQMPLLANGCYDKMSDRGGGSPTLQGLHHHGQR
VELRKVLEPVEIGIQVTPEEEEEEVGGRGRGERRERTPIKGICPKQENALAGGRDEPSSY
ICTTCKQPFPSAWFLLQHAQNIHGIRIYLESNPSSTALTPRITMPPPMGNDSIPQSPLTN
FLGDNNPFHLLRMTGPLLREPPPGFVENRLPNTPPFVSPPPRHLLDPHRLERLSAEEMGL
ISQHPSAFERVMRLTPMAMESQSMDFSRRLRELAGNNNITTPPLSPSRANPMHRLLNPNP
FQSGPKSPFLSTPPLPPMPPNSTTPPQTQNKVKSCEFCGKTFKFQSNLVVHRRSHTGEKP
YKCQLCDHACSQASKLKRHMKTHMHKAGSLTGRSDDGLSTTSSPEPGTSDVTGEGMKNRD
GDFQGEGNEEEEEEEEEEELENESRPESNFSMESEFYRNRENGSKPLSEEKSSLALEKMM
EGGGLNSIQQYNNLIVDNRKRMPFSKRGSDGLRDTGDEDSVVGEINHHQQEERTTINGRN
CGSGDSFSGLFPRKPTPITSPSLSNSSNKRIKIEKDLDLPPAPHIPSENVYSQWLVGYAA
SRHFIKDPFLGFTDSRQSPFATSSEHSSDNGSLRFSTPPGDLLDGGLSGRSGTASGGSTP
HLGGGPGPGRPGSKDSRRSDTCEYCGKVFKNCSNLTVHRRSHTGERPYKCELCNYACAQS
SKLTRHMKTHGQLGKDVYRCDICQMPFSVYSTLEKHMKKWHGEHLMTNEVKIEQAERT
NT seq
2517 nt
NT seq
+upstream
nt +downstream
nt
atgtcccgacgcaagcaggggaacccgcagcacctgtcccagagagaaataacacagatt
gagcacccagatggcagcctgctctccgactccttactcccacagtcgcttggcctccct
ccccacgcgttggagcccagcctggcccacgccctgccacctggacttcacgccgaccac
gacctgctgacatgcggccagtgccaggtgaccttcccgctgggcgacatccttctcttc
attgagcacaagaagaagcagtgccaaatgccgctgctggccaatggctgctacgacaag
atgagcgaccgcggaggagggagtcccactctgcagggcctacatcaccacggccagcgg
gtggagctgaggaaggtgctggagccagtggagatcggcattcaggtgacacctgaggag
gaggaggaagaggtgggaggaagaggaagaggggagaggagagagaggacgcccatcaaa
ggaatttgccccaagcaggaaaacgcactggcaggtggcagggatgagccttccagctat
atatgtaccacatgcaaacagcccttccccagcgcctggttcctgctgcagcatgcccag
aacatccatggcattcgcatttacctggagtccaacccctccagcacagccctcactcca
cgcatcactatgcccccgcccatgggcaacgactccatcccacagtcccccctcaccaac
tttcttggggacaacaatcctttccatctcctaaggatgacaggtcccctgctacgggag
cctcccccaggttttgtggagaaccgccttcccaacacacctccgtttgtcagcccccct
ccccgccatctcctggacccccaccggctggaacgccttagtgcagaggaaatgggcctc
atctcccagcaccctagtgcctttgagagggtgatgcggctaacacctatggccatggag
tcccagtctatggacttctccagacgattacgtgagttggcagggaacaacaacattacc
acaccaccattatcacccagcagggccaaccctatgcaccgactactaaaccccaacccc
tttcagtccggaccaaaatctccctttcttagcacaccccccttaccaccaatgccccca
aatagcaccacccctccccagacacagaacaaggtcaagtcctgtgagttctgtggtaag
accttcaaatttcagagcaacttggtggtgcatcggcgcagccataccggagaaaaacct
tacaagtgccagctgtgtgaccacgcctgctctcaggcaagcaaactgaagcgccacatg
aagacacacatgcacaaggctggatccctgaccgggcgctcagatgatggactgtctacc
acgagctctccagagccaggtaccagtgatgtcacaggtgagggcatgaagaatcgtgac
ggggacttccagggggaaggcaacgaggaggaagaagaggaagaagaagaagaggaactt
gagaatgagagtcgaccagaatccaacttcagcatggagtctgagttctaccgcaacagg
gagaatggttctaaaccattatcagaggagaagtcatcactcgctcttgagaagatgatg
gagggtgggggcctcaactcaatacagcagtacaataatttaatagttgacaatcgtaaa
aggatgcccttctctaagaggggctcagatgggctgcgggacactggggatgaagactca
gtggttggcgaaataaaccaccaccagcaggaagagaggaccaccattaatggccggaac
tgtggctctggtgactctttctcaggcctgttcccccgtaagcccacacccatcactagc
cccagcctgtccaactcttcaaataagaggatcaagattgagaaggacttggaccttcct
ccagcaccccacattccctcagagaacgtctactcccagtggttggtgggctacgctgcc
tcacgacacttcatcaaagaccctttcctaggtttcaccgactccagacaatctcccttt
gccacctcctctgagcactcatcagacaatggcagcctgcggttctcaacacctccgggt
gacctgctggatggtggcctttccggccgcagcggcaccgccagtgggggcagcacacca
catctgggtggaggtcctggaccaggtcgacctggctccaaggacagcaggaggtctgac
acctgcgaatactgtggaaaggtgttcaagaactgtagcaacctgacggtgcatcggcgc
agtcacacaggtgaaaggccctacaagtgtgagctgtgcaactatgcctgcgcccagagc
tccaagctcacgcgccacatgaagacacatggccagcttggtaaggacgtctaccgctgt
gacatttgccaaatgcccttcagcgtgtacagcactctggaaaaacacatgaaaaagtgg
catggagaacatttgatgacaaatgaggtcaaaattgaacaagcagagagaacctaa
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