Hippoglossus stenolepis (Pacific halibut): 118117285
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Entry
118117285 CDS
T08308
Symbol
pbx1a
Name
(RefSeq) pre-B-cell leukemia homeobox 1a isoform X1
KO
K09355
pre-B-cell leukemia transcription factor 1
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Pathway
hsp04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
118117285 (pbx1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
hsp03000
]
118117285 (pbx1a)
Transcription factors [BR:
hsp03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain TALE
118117285 (pbx1a)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
PBC
Homeobox_KN
Homeodomain
DUF7260
UCH
GAIN
LZ3wCH
Motif
Other DBs
NCBI-GeneID:
118117285
NCBI-ProteinID:
XP_035025287
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Position
11:14182324..14231230
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AA seq
428 aa
AA seq
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MDEQPRLMHSHGVGMAGHPGLAQHMQDGTAGTDGDGRKQDIGDILQQIMTITDQSLDEAQ
ARKHALNCHRMKPALFNVLCEIKEKTVLSIRGAQEEEPPDPQLMRLDNMLLAEGVAGPEK
GGGAAAAAAAAAAAGGVGADNSAEHSDYRAKLSQIRQIYHTELEKYEQACNEFTTHVMNL
LREQSRTRPISPKEIERMVSIIHRKFSSIQMQLKQSTCEAVMILRSRFLDARRKRRNFNK
QATEILNEYFYSHLSNPYPSEEAKEELAKKCSITVSQVSNWFGNKRIRYKKNIGKFQEEA
NMYAARTAVSATSVSAQGSQANSPSTPNSAGSAGSFNMSNSGDLFMSVQSLNGDSYQGGQ
VGANIQSQVDTLRHVISQTGGYSDSLAASQMYSPQGINTNGGWQDAPTPSSVTSPTEGPG
SVHSDTSN
NT seq
1287 nt
NT seq
+upstream
nt +downstream
nt
atggacgagcagccgcggttgatgcactcccacggggtaggcatggccggacaccccggc
ctggcgcagcatatgcaggatggcacggcggggacggacggggacggaaggaagcaggac
atcggagacatattacagcaaataatgactatcacagaccaaagcttagacgaagcgcag
gcgaggaaacatgcactgaactgccacagaatgaaacctgccctcttcaacgtcttgtgt
gaaataaaggagaaaacagtgctcagtatccgaggcgcccaggaggaggagcctccagat
ccacagctgatgcgactggacaacatgctgctggcggagggcgtggctggcccggagaaa
ggtggaggggcggcagccgcagcagctgccgcggcggccgctggtggcgtcggcgccgat
aactcagcagaacactccgactatcgggccaagctgtcgcagatccgacaaatttaccac
acagagctggagaagtacgaacaggcgtgcaatgagttcaccacccatgtgatgaacctg
ctgagggagcagtctcgaacacgacccatctcgcccaaagagatcgagcgcatggtcagc
atcattcaccgcaagttcagctccatccagatgcagctgaagcagagcacctgcgaggct
gtcatgatcctgcgctcacgcttcctcgatgccagacgaaagaggaggaacttcaacaaa
caggcgacagagatcctgaatgagtacttctactcccatctcagtaacccctaccccagc
gaggaggccaaagaggagctggccaaaaaatgcagcatcacagtgtcacaggtgtcgaac
tggttcggtaacaagagaatccgatacaagaaaaacatcggcaaattccaggaagaggcc
aacatgtacgcagccaggaccgcggtcagcgcaaccagtgtgtctgcccaaggcagccag
gcaaactcgccatcaactcccaactcagcaggttctgctggctcttttaacatgtcaaac
tccggagacttgttcatgagtgtgcagtccctcaatggggactcgtaccaaggggggcag
gttggggccaacatacaatcccaggtggatacccttcgccatgttatcagccagaccggc
ggatacagtgacagcctcgcagccagccagatgtacagtccacagggcatcaacacaaat
ggcggctggcaagatgctccgactccttcgtcagtgacatcgcccacagaaggacccggg
agcgttcattcggatacttccaactga
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