Hippoglossus stenolepis (Pacific halibut): 118117523
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Entry
118117523 CDS
T08308
Symbol
nectin4b
Name
(RefSeq) nectin-4
KO
K06593
poliovirus receptor-related 4
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Pathway
hsp03265
Virion - Ebolavirus, Lyssavirus and Morbillivirus
hsp04517
IgSF CAM signaling
hsp04520
Adherens junction
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus
118117523 (nectin4b)
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
118117523 (nectin4b)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
118117523 (nectin4b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
hsp04515
]
118117523 (nectin4b)
Cell adhesion molecules [BR:
hsp04515
]
Immunoglobulin superfamily
Nectin family
118117523 (nectin4b)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_3
V-set
I-set
C2-set_2
Ig_2
ig
Protocadherin
TMEM154
EphA2_TM
DUF6377
Motif
Other DBs
NCBI-GeneID:
118117523
NCBI-ProteinID:
XP_035025697
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All DBs
Position
11:21021991..21037200
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AA seq
580 aa
AA seq
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MQCVKSLTLLLLLVVKVHGDFVEPPQPNTSLRSLAESQTRLPCRYQAEEGEKVVQVTWYK
ELADGSKDQIITAHFSEGHTEFGRYSGRVKFESSSPTEDSALLIPSTEESDEGSYICHIS
TFPNGNFERHITVTVWILPISSLDPVILKEGDSYRVVASCRAVGRPPPRLSWDTDLPGQS
QNRTSEGGSVSSYFSLHPLRSMNGKKLDCLMWHPALNGPRRISTRLEVQYPPDATITSVS
GDWFVGLENAELVCDSGGNPKPQNFTWTRRGGALPDGVSVVGGKLVFGRTLRLNDTGVYE
CVARSVAGVGKAEYSVTVAGTSQRKGITNDENFLLIILGSSAAALVMVLIIVVLLVNRHH
RHRNKKLERQLTEKIDEMNSLSRQNSFRRLNSVSTDPRVQPEDYALLRVDSRMKNSQMSL
ERPINKGSQSTLGGKWSPPGGVELDELGRPVIWHDGRESLRHTEMDGEKEERRKRVESYL
KSSNMSLDSGLPSSLIPLKVQQEEGPREPDLAHLGEGGLPRVEDWAPTQSVEEEREVDDD
GSSSYQISEALTNHFYFSKGVLRPRPHSNAILMHPKGQII
NT seq
1743 nt
NT seq
+upstream
nt +downstream
nt
atgcagtgtgtgaagagtctcactctgctccttctgctcgtggtgaaggtgcacggggac
tttgtggagcctcctcagcccaacacctccctgcgctcgctggcagagagtcagaccagg
cttccctgccgctaccaggcggaggagggggagaaggtggtgcaggtcacatggtacaag
gagctcgcggacggcagcaaggaccagatcatcacggcccacttctctgagggccacaca
gagttcgggcgttactctggtcgggtgaagttcgagagcagcagccccacagaagactcg
gctctgctcatccccagcacagaggagtcggacgagggcagctacatctgccacatctcc
accttccctaacggaaactttgagaggcacatcaccgtcaccgtctggattttacccatc
tcctccctggaccctgtcatcctgaaggagggggattcgtaccgtgtggtggcctcttgc
cgagcggtgggccgcccgcctccccgtctctcctgggacaccgacctgccgggccagtcc
cagaaccgcaccagcgagggcgggtccgtgtccagctacttctccctgcacccgctgcgc
agcatgaacggcaaaaagctggactgcttgatgtggcatcctgctctgaacgggccccgc
aggatctcaacccgcctggaggttcagtaccccccagatgccaccatcaccagtgtgtca
ggagactggttcgtgggtttggagaacgctgagctggtgtgtgacagcggaggaaacccc
aaacctcagaacttcacctggacacggaggggaggagctctgccagatggggtgtccgtg
gttggaggaaaactcgtcttcgggcggaccctccgcttgaatgacaccggggtctacgag
tgtgtggccaggagcgttgcaggagtaggaaaagcagagtattcagtgacagtagcaggg
acatctcagcgtaagggcatcaccaatgacgagaacttcctcctgatcatcctcgggtcc
tcggccgccgccctggtcatggtcctgatcattgtcgtcctgctcgtcaaccgccaccat
cgccacagaaacaaaaagcttgagaggcagctcaccgagaaaattgacgaaatgaacagc
ctctccagacaaaactctttcaggagactgaactccgtgagcactgaccccagagtgcag
cctgaagattacgccctgctcagagtcgacagcaggatgaagaacagccaaatgtccctg
gagcgtcccatcaacaaaggcagccagtccacgctgggcgggaagtggagtcctccagga
ggagtggagctggacgagctgggacgtccggtcatctggcacgacggcagggagagcctg
agacacacggagatggacggagagaaggaggagcgcaggaagagggtggagtcgtacctg
aagagcagcaacatgtcgctggactctggtcttccctcatccctgattcccctgaaggtc
cagcaggaagaagggcccagagagccggacctcgcccacctcggggagggcggcttgcca
cgtgtggaggactgggctcccacgcagtcggtagaggaggagcgcgaggttgacgatgac
ggcagcagctcctaccagatctcagaggcgctcaccaatcacttctacttcagtaaagga
gtcctcagacccagaccacactccaacgccattctgatgcaccccaaaggacagattatc
tag
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