Hippoglossus stenolepis (Pacific halibut): 118117990
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Entry
118117990 CDS
T08308
Name
(RefSeq) receptor-type tyrosine-protein phosphatase F
KO
K05695
receptor-type tyrosine-protein phosphatase F [EC:
3.1.3.48
]
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Pathway
hsp04514
Cell adhesion molecules
hsp04520
Adherens junction
hsp04910
Insulin signaling pathway
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
118117990
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
118117990
09150 Organismal Systems
09152 Endocrine system
04910 Insulin signaling pathway
118117990
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
hsp01009
]
118117990
Enzymes [BR:
hsp01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.48 protein-tyrosine-phosphatase
118117990
Protein phosphatases and associated proteins [BR:
hsp01009
]
Protein tyrosine phosphatases (PTPs)
Class I PTPs (Classical)
Receptor PTPs
118117990
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Y_phosphatase
fn3
I-set
Ig_3
Pur_ac_phosph_N
fn3_2
Ig_2
Interfer-bind
ig
Tc-R-P
PTP-SAK
DSPc
C2-set_2
Y_phosphatase3
PTPlike_phytase
PTP-NADK
V-set
KIAA1549
Motif
Other DBs
NCBI-GeneID:
118117990
NCBI-ProteinID:
XP_047197944
LinkDB
All DBs
Position
11:complement(18951210..19109038)
Genome browser
AA seq
1915 aa
AA seq
DB search
MVPNIHLAVPLLPRGALLFLLLFSCMVFSSVAESMPSFVKSPEDQTGISGGVASFVCQAT
GDPKPRITWMKKGKKVSSQRFEVIEFDDGSGSVLRIQPLRTHRDEAIYECTATNSAGEIN
TSAKLTVLEENQVPHGFPTIDMGPQLKVVEKTRTATMLCAAGGNPDPEITWFKDMLPVDI
SSSNGRIKQLRSGTLGGTPIRGALQIENSEESGKYCSLALNIRFTLHIQRIHSFVLFVSV
VRRVPPRFSIPPTNQEVMPGGSINLTCVAVGSPMPYVKWTTGQVELTKEEEMPLGRNVLE
VTNIRVSANYTCVAMSSLGIIEATAQVTVKALPKPPASLIVTETTATSVTLTWDSGNPEP
VSYYMIQYRAKSSDNGFQEVEGVATTRYSIGGLSPYSEYEFRVMAVNNIGRGPPSDPVET
RTGEQAPSSPPLHVQARMLSASTMLVQWEPPEEPNGQIRGYRVYYSSDLTAPLSAWQKHN
TDDSSLTTISGLTPDITYSLRVLGFTSVGDGPPSDVLQVKTQQGVPAQPSSFEAEAELDN
RIMLTWLWPVQGPITKYELQYWEAGSDNKIHVTFNPAGSHAVDALKPDTLYHFSLAARSE
MGLGVYTQPIEARTAQSTPSAPPQEVHLVSLSSTSLKVSWVAPPAASRHGAIVRYTVSYQ
ALAGEDTERHEVTGIGADATSYLMLGLEKWTEYQVWVRAHTDVGPGPESAPVKMKTKEDV
PGAPPRKLEVEAINSTAIRVTWKPPLQGKQHGQIRGYQVIFSRLENGEPRGQPNIMDVAL
PEAQWNIEESTEHEAIIAGLHSETTYSVTVAAYTTKGDGARSKAKVITTTGAVPGRPTMM
ISTTMENTALIQWQPPKDMVGELMGYQLQYKRTDEETFTSRELRKIDDHYTVTGLHKGAT
YIFRLSARNRAGIGEAYVKEISTTEDVPAGFPFNLQVTGLTQSSTQLTWEPPLVAERNGK
IVHYVVVYRDINSQQNTTNRTSDTHMTILGLNPDTTYDIRVQAYTSKGAGPLSPSIQSRT
MSNDFPTLNFGVKAVMKTSVLLSWDLPANYKPQVPFKILYNQQSVEVQGNLKRKLISQLQ
PDTDYSFVLTSRGNIAGGLQQQVSIRTAPDLIKTKPSTHQAEGGKMTIELPKVQTTTRVR
WYYIVVVPVSQSQRQWKNPDEMDLDELLKSSEGPVLRRRRHLDSSKPYIAAKLESLPASF
TLGDEKRYSGFYNKPLTSPQEYLCFVLAMLRSDGTDNAANYMTFSASPYSDPIQVAASMS
EQPEMLWVMGPVLAVVLIVIIVIAILLFKNSKQERKRASPLPKDDHSGGVKDSLLANSSD
PVEMRRLNYQTPGMREHPPITVVDLSDHIERLKANDGLRFSQEYESIDPGQQFTWENSNM
EVNKPKNRYANVIAYDHSRVVLTSVDAVPGSDYINSNYIDGYRKQNAYIATQGPLPETLS
DFWRMVWEQRSNTIVMMTRLEEKSRVKCDQYWPSRGTETYGMIQVTMLDTVELATYSVRT
FALYKNGSSEKREVRQFQFMAWPDHGVPEYPTPILSFLRRVKSCNPPDAGPMVVHCSAGV
GRTGCFIVIDAMLERMKHEKSVDIYGHVTCMRAQRNYMVQTEDQYIFIHEALLEAATCGN
TEVLARNLYAHIQKLTQPPPGETVTAMELEFKRLANSKAHTSRFISANLPCNKFKNRLVN
IMPFESTRVCLQPIRGVEGSDYINASCIDGYRQQKAYLATQGPLAETTEDFWRMLWEHNS
TIVVMLTKLREMGREKCHQYWPAERSARYQYFVVDPMAEYNMPQYILREFKVTDARDGQS
RTIRQFQFTDWPEQGVPKTGEGFIDFIGQVHKTKEQFGQDGPITVHCSAGVGRTGVFITL
SIVLERMRYEGVVDLFQTVKTLRTQRPAMVQTEDQYQLCYRAALEYLGSFDHYAT
NT seq
5748 nt
NT seq
+upstream
nt +downstream
nt
atggtgcctaatattcacctggcagtgcccctcctgcccagaggggcgttgctgttcctg
ctactcttcagctgcatggtgttctcctctgtggcagagagcatgccaagtttcgtgaaa
tccccagaggaccagacgggtatctcgggcggagttgcatcgtttgtgtgccaggccact
ggggaccctaaacccagaatcacctggatgaagaaaggcaagaaagtcagctcccagcgc
tttgaggtgattgagtttgatgacggttcgggctccgtactgcggatccagccactgcgc
acacaccgagatgaagccatttacgagtgcacagccaccaacagcgctggcgagatcaac
accagtgctaagcttacagtgcttgaagagaaccaggtcccccatggcttccccaccatc
gacatgggtccccagctgaaggtggttgaaaagacccgaactgccaccatgctgtgcgct
gccggtggaaacccagacccagagatcacctggttcaaggacatgcttcctgtggacatc
agcagcagcaacgggcgaatcaaacagctccgctcaggtacactaggtggtacaccaatt
agaggagctctgcaaattgagaacagcgaggaatcagggaaatattgcagtttagcattg
aacattagattcaccttacatatccaacgtattcactcctttgtcctgttcgtttctgta
gtgcgaagagtcccaccaagattctccattccgcccaccaaccaagaggtgatgccaggc
ggcagcatcaatctgacgtgcgtggcggtgggctctccgatgccctacgtcaagtggacg
acgggccaggtggagctgaccaaggaggaagagatgccgctgggacgcaatgtgctggag
gtcacaaacatccgcgtgtcggccaactacacgtgcgtggccatgtcttctctgggcatc
atcgaagccaccgctcaggtcactgtcaaagctctgccaaagcccccagcctccctcatt
gtgacagagaccacagccaccagtgtgacactcacctgggactccgggaacccagaacca
gtgtcctactacatgatccaatacagagccaagtcctcagacaatggcttccaggaagtg
gaaggtgtggcgaccacccgttacagcatcggcggacttagcccctactccgagtacgag
ttccgcgtcatggctgtcaacaacattggccgcgggccgcccagcgaccccgtggagaca
cgcaccggtgaacaggccccctcctcacctccgctgcacgtccaggcgcgcatgctaagt
gccagcacaatgctggtccagtgggaaccgcccgaggaacccaatgggcaaatcaggggc
tatcgagtgtactacagctcggacctgacggctccgctcagcgcctggcagaaacacaac
acagatgacagcagtctgaccaccatctcaggcctgactcctgatatcacgtacagcctg
cgggtgctgggcttcacctccgttggtgacggaccaccctctgacgtcctgcaagtgaaa
acgcagcagggagtccctgcgcagccgtccagctttgaggccgaagccgagctggacaac
cgcatcatgctaacatggctgtggcctgtgcagggccccatcacaaagtatgagctgcag
tactgggaggctggctcagacaacaagatacacgtgaccttcaacccggcgggctctcat
gccgtggatgctctaaagcctgataccttgtaccacttctcgctggccgcccgttctgag
atgggtttaggcgtttacacacagcccatcgaggcccgcaccgcccagtccaccccgtcc
gctccccctcaagaggtacacctggtcagcctgagctccaccagtctcaaggtgagttgg
gtggcgccgcctgccgctagccgccacggcgccattgtgcgctacacagtcagctaccag
gccctggctggagaggacacagagcggcacgaggtgactggcatcggtgcagacgccacc
agctatttgatgttggggctggagaagtggactgagtatcaggtgtgggtgagggcacac
actgatgtgggcccgggccctgaaagtgccccagtgaagatgaaaaccaaagaggatgtg
ccaggagcaccccccaggaagctggaggttgaggccataaactccacagccatccgggtc
acctggaagccgccgctgcagggcaagcaacacggccaaatccgaggataccaggtcatc
ttctcccggcttgaaaacggcgaacctcgaggccagcctaatatcatggacgttgctctg
ccagaggcacagtggaatattgaggagtccaccgagcatgaggccatcattgccgggctg
cattctgagaccacgtactctgtcactgtagcagcgtacaccaccaagggggatggagcc
cgtagcaaagctaaagtcatcaccacgacgggggcagtgccaggcaggccgactatgatg
atcagcaccaccatggaaaacacagcgctgatccagtggcagccacctaaggacatggtg
ggtgagctgatgggctaccagctgcagtacaagcgcaccgatgaggaaacctttacctca
cgcgaactgaggaagatcgatgaccactacactgtcaccggactgcacaaaggcgcgacc
tatatcttccgcctcagtgctcgcaatcgcgcaggcattggcgaggcctacgtgaaggag
atcagtaccaccgaagacgtgcccgcaggcttccccttcaacctacaagtaacaggactg
actcagtccagcacccagctgacctgggagccgccgctggtggcagagaggaacggcaaa
atcgtccactacgtggtggtgtacagggacattaacagtcagcagaacaccaccaaccgc
acgtccgacactcacatgaccatcctgggccttaatcctgacaccacctacgacatccgg
gtgcaggcgtataccagcaagggcgctggacccctcagcccgagcattcaaagcaggacc
atgtcaaacgactttccaacactaaactttggcgtcaaagctgtgatgaaaacatccgtc
cttctcagctgggatctgccagcgaactacaaaccccaagtgccttttaagatcttatat
aaccagcaaagtgtggaagtgcagggaaacctgaagaggaagctgatttcgcagctgcag
ccggacacagactactcctttgtgctgacaagcaggggcaacattgctggtggtctgcag
cagcaggtgtccatacgcactgctcctgacctgatcaagaccaagcccagcacacatcag
gctgagggcggcaagatgaccatcgagctgcccaaagtccagaccaccacacgcgtcagg
tggtactacattgtggtggtgccagtatcccagtcacagcggcagtggaagaatccagac
gagatggacctggatgagctgctcaagtcaagcgaaggtcctgtcctgaggcgtcggcgt
cacctggattcctccaaaccttacattgccgctaaactggaatcgctgcccgccagcttc
accctgggggatgagaagaggtacagcggtttctacaacaagcctctgaccagtccacag
gagtacctctgcttcgtcctggccatgctccgatccgacgggacggacaacgctgcaaat
tatatgacgttttcagccagtccctactcagacccgatccaagtcgcagccagtatgagt
gagcagccggaaatgttgtgggtcatgggcccagtattggccgtggtcctcatcgtcatc
atcgtcatcgccatcctgctctttaagaacagcaaacaggaaaggaaacgggcatctcct
ctacccaaggatgaccactcaggtggggtgaaagactccctgctggccaattcctccgac
cctgtggagatgagaagactcaactaccagaccccaggaatgagggagcacccgcccatt
actgtcgttgacctgtctgaccacatagagcgactcaaggcgaacgacggcctccgtttt
tcccaggagtatgagtccattgatcccggccagcagtttacctgggagaactccaacatg
gaagtcaacaagccaaagaatcgctatgcaaacgtcatcgcctatgaccactccagagtg
gtgctcacctctgttgacgctgttccaggcagtgactacatcaattccaactacatcgac
ggctacaggaagcagaatgcctacatcgccacacaggggcctctgccagagacactcagc
gacttctggaggatggtgtgggagcaaagatccaacaccattgtcatgatgacgagacta
gaggagaagtcacgggtgaagtgtgaccagtattggccatcacgaggaaccgagacctac
gggatgatccaggtcaccatgctggacactgtggagctggctacttacagcgttcgtaca
ttcgccctctacaagaacggctccagtgagaagagagaggtgagacagttccagttcatg
gcctggccagaccacggagtaccagagtacccgacacccatcctgtccttcctgcggcgg
gttaagtcctgcaatcctccagacgcagggcccatggtggtccactgcagtgctggcgtg
ggcaggacaggctgcttcatcgtgatcgatgccatgctggagcgcatgaagcacgagaag
tccgtggacatctacggccacgtgacgtgcatgcgcgcccagaggaactacatggtccag
accgaggaccagtacatcttcatccacgaggccctgctggaggcggcgacctgcggcaac
accgaggtgctggcccgcaacctgtatgcacacatccagaaactcacccagcccccgccc
ggcgagacggtcactgccatggagctggagttcaagagactggccaactccaaagcccac
acgtcacgcttcatcagcgccaacttaccctgcaacaagttcaagaaccgcctggtcaac
attatgccttttgagtccacccgcgtctgcctgcagcccatccggggcgtcgagggctcc
gactacatcaacgccagctgcatcgatggctacagacagcagaaggcctacctggccacc
cagggcccactggccgagaccaccgaggacttctggaggatgctgtgggagcacaactcc
accatcgtcgtcatgctcaccaagctacgagagatggggcgggagaagtgtcatcagtac
tggccggcagagcgttcagccaggtaccagtactttgtggtggatccaatggctgagtac
aacatgccccagtacatcctccgagagtttaaagtcacagatgccagggacggccagtcc
agaacaatccgccagttccagttcactgactggcccgagcaaggagtgccaaaaactgga
gagggcttcattgatttcatcggacaagttcacaaaaccaaggagcagtttggacaagac
ggaccaatcactgtacactgcagtgccggggtgggcaggaccggagtcttcatcaccctc
agtatcgtgctggagaggatgaggtacgagggcgtggtcgacctcttccagacggtgaag
acacttcgcacccagcggcctgccatggtgcagacggaggaccagtaccagttgtgctac
agggcagcgttggagtacctggggagctttgaccactatgcaacgtaa
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integrated database retrieval system
