Hippoglossus stenolepis (Pacific halibut): 118118773
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Entry
118118773 CDS
T08308
Name
(RefSeq) Hermansky-Pudlak syndrome 6 protein
KO
K20192
Hermansky-Pudlak syndrome 6 protein
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
hsp04131
]
118118773
Membrane trafficking [BR:
hsp04131
]
Endosome - Lysosome transport
Others
BLOC-2 complex
118118773
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Gene cluster
GFIT
Motif
Pfam:
HPS6_C
HPS6
Motif
Other DBs
NCBI-GeneID:
118118773
NCBI-ProteinID:
XP_035027970
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Position
12:complement(13020730..13025703)
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AA seq
941 aa
AA seq
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MAGFVLEQLSDFGDFIGGTELGEALEAAHHGLSDVRMSPDGRHVHVILRKPKAGLVTFDK
YVRAQPVHNQKKLDLCATRAVPIVDVLYLDHNNNNNNHSSSSSRDAVAVVYENGKAEFWR
FQEGKAGWHLLQTSDLCNSPRARVVSVCVCANLIIWCEERPPSESSPALGSTRNKFRYCV
CRRDFEVEEGAVSLGGVKIALHNNPKFTLVSSGEYVHLLPDLKVKPLLSISKLFLSWSPR
QDSFRISTTCKNTALKKLSAKESDFKRLVTDSLGFLSTLEPPEIYDVSPTGCGGLLLLLS
TGWLCLLQKDGMLRQLYKQADNCLAKYGTHTSLCMYQDTVVLLVGQNLHLIDMNSGRELE
KIVLKREGVLYANQADRQTPHLLSENGLFVVVNKETDSRDCNYKVKPSDISRAECIHPGA
LLVEAVFEEACKYYQQRSLSSTQLTVDTLKKGGRFQAPISLASILGNYISTGSKQKGAEV
SQNGGGGCMAGQDKLMGSLEAELKALVSLEELKGSLVRGSVKEVEAVCEILVEKEVARLL
SLSELDKEPLLYLNSIFSIFPCQAWRAAQAALQIHHNGEGTLSSSAPTDVWKTVLGPASA
SRSPAALRLSSGGPRQNHSPKGDRTANCNVKSSSSTSPASLPVFELLCQSVFHFQPSWLP
KFLELAQQQQGSAGLGLSLASSSWNFSGGRGREGGENNVPLYKRALGVLSSLCSDGEQQQ
NLEVELLLVSGRPNAILQAMRVLVAKQKWERVMQVAQTFCKPSPLLNKEIFTTLLCEVAH
HRELDPYLELLWTLCPEDLTVTTIINLVLKSLPSPNTPSSSTSSSSFSMSTTASSSPAPF
ADSHSNQLTIGLLKPLLRKVLQRETKPSQHYADILQSPLFPPPAPPRQPAEQPGNIADPS
TDLGGNISPSLLTESPEQQSSTHTTVQRATVTIPANPFCFT
NT seq
2826 nt
NT seq
+upstream
nt +downstream
nt
atggcggggttcgttctggagcagctgtctgatttcggggacttcatcggcggcacggag
ctgggcgaggctcttgaagcggctcaccacggtctgtcggacgtccgcatgagccccgac
ggtcgtcacgtccatgtcatcctccgaaagcccaaagccggtctcgtgacttttgacaag
tatgtaagagcgcagccggtccacaaccagaagaagctggatctgtgtgcgacccgagct
gtgcccatcgtggacgttttgtatctggatcacaataataacaacaacaaccacagcagc
agcagcagtagagatgcggtggccgtggtgtacgagaacggaaaagcggagttctggagg
ttccaggagggcaaagcaggctggcacctcctgcagacctcggacctgtgcaacagcccc
cgggccagggtggtctctgtgtgcgtgtgcgccaacctcatcatctggtgcgaggagcgg
ccgccctcagagagctccccggccctcggctccaccaggaataagttcagatactgtgtt
tgcagacgggacttcgaggtggaggagggggccgtcagcttgggaggggtgaaaatcgcc
ctccacaacaatcccaaattcaccttggtcagctcaggtgaatatgtgcaccttctgcct
gatttgaaggtgaaaccgctgttgagcatttctaagttgttcctctcctggtcccctcgt
caggattcctttaggatcagcaccacatgcaaaaacactgctctgaaaaagctttcggct
aaggagtctgacttcaagaggctggtgacggactctctggggtttttatcgactctcgaa
ccgcctgagatctacgacgtctcgcccacgggctgcggcggcctgctgctgctgctcagc
acgggctggctgtgtctcctgcagaaagacgggatgctgcggcagttgtacaaacaggca
gacaactgcctggcaaagtatgggactcacacgagcctctgcatgtaccaggacacggtg
gtgctgctggtgggacaaaacctgcatcttatagacatgaactctggcagggagctggag
aagattgtgctgaagagagaaggggtgttgtatgcaaaccaggctgatagacagaccccc
cacctgctctcagaaaatggactttttgtggtggtgaacaaggagacagactccagagat
tgtaactataaagtgaaaccgtctgatataagtagagcagagtgtattcatcctggagcc
ctcctggtggaggctgtttttgaggaggcctgtaaatactaccagcagaggagcctgagc
agcacccagctcactgttgacacgctgaagaaaggaggcagattccaggctcctatctct
ttagcctccatcctcgggaactacatcagcacagggtcgaagcagaagggagccgaggtg
tcccagaacggaggaggtgggtgtatggcagggcaagacaagctaatgggctctctggag
gccgagctgaaggccctggtctctctggaggagctgaaggggagtttagtgaggggaagt
gttaaagaggtggaggcagtgtgtgaaattctggttgagaaagaagtagccagactgctg
tcattgtccgagctggataaagagcctctgctttacctcaactccatcttcagcatcttc
ccgtgccaggcgtggagggcggcacaggctgccctgcagatacaccacaacggggagggg
actctgtccagcagcgctccgacagatgtgtggaaaactgtcctgggtcctgcttcagcc
tccaggtcccccgccgccctcaggttatcaagtggcgggccaagacaaaaccacagccct
aaaggtgatcgcacagcaaactgtaatgtcaaatcttcaagctccacttccccagcttcc
ctccctgtgtttgaactcctctgccaatcagtttttcacttccagcccagctggctgccc
aagttcctcgagctcgcccagcagcagcagggttcagccggcctgggcctgagtctggcc
tcgtcctcgtggaacttctctggcgggagaggcagggagggcggggagaacaacgtgccg
ctctataaacgagccctgggcgtcttgtccagcctgtgctcggacggagaacagcagcag
aacttggaggtggagctgctgctagtcagcgggcggcccaacgccatcctgcaggcgatg
agggtcctcgttgccaagcagaagtgggagcgggtcatgcaggtggcccagacgttctgc
aaaccgagtccgctgctcaacaaggagattttcactactctgttgtgtgaggtggcccac
cacagagaactggacccatacctggaacttttgtggactctgtgccctgaggacctcact
gtcaccaccataatcaacttggtgctgaaaagcctcccctcccctaacaccccttcctca
tccacctcctcctcttccttctccatgtccactacagcctcctcatccccggctcccttt
gcggactcccacagcaaccagctgaccatcgggctgttgaaacctctcctgagaaaagtc
cttcagcgggagaccaagcccagccagcactacgctgacatcctccagtcccctctgttt
cctcctccagcacctcctcgtcagcccgcggagcagccagggaacatcgcagatcccagc
acagacttgggcggcaacatatccccttctcttctcacagaatcacctgaacagcagtcg
tccacacacacaactgtgcaaagggcgactgtgacaatacctgctaacccattttgcttt
acataa
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