Hippoglossus stenolepis (Pacific halibut): 118119639
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Entry
118119639 CDS
T08308
Symbol
trpm2
Name
(RefSeq) transient receptor potential cation channel subfamily M member 2
KO
K04977
transient receptor potential cation channel subfamily M member 2 [EC:
3.6.1.13
]
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Pathway
hsp04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
118119639 (trpm2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
hsp04040
]
118119639 (trpm2)
Enzymes [BR:
hsp01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.1 In phosphorus-containing anhydrides
3.6.1.13 ADP-ribose diphosphatase
118119639 (trpm2)
Ion channels [BR:
hsp04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
118119639 (trpm2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSDAT_euk
LSDAT_prok
Ion_trans
LDcluster4
Motif
Other DBs
NCBI-GeneID:
118119639
NCBI-ProteinID:
XP_047198447
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All DBs
Position
13:10933560..10948859
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AA seq
1462 aa
AA seq
DB search
MGEAEVESELVHALAISVARPSKHLSLSPSFQRCAFGSWIRENICKTECRLFEKGVREDV
CKCGYSKNDHVEEAIKPEDFTGESWDKHRHVREVPTDAYGDISFGGSGPKTGKYVRVSAD
TSPEDLYHLLTEQWKLSPPNLLISVTGGAKNFYLKARLKNMFHRGLIKVAQTTGAWIITG
GTHAGVMKHVGQAVRDHALSSSSSQGQIVAIGVATWGVIHNRDALVNSEGCYPAHYLMDI
NGQGRLSCLDNNHTHFLLVDDGTNGRYGVEIELRSRLERCISGKLLGNKVSGVTIPVVCL
VLDGGPGTLNTIYNAVINGTPCVVLEGSGRIADLIAQVAGLPMKRVTIALVRQLMKKFFG
QEEETQVITWTKMIQDIIQLPHLLTVFRVSEDSHGDMDVAILQALLKASRTSESQCWRRQ
LELAIAWNRVDIAETEIFTEESQWKSSDLHWAMLSALIGNKPEFVSLLLENGVSLRDFLQ
DEETLCELYKQLPGCFFLRRLAKRVQSSSRIRGKKFNIRRRTRCGQAETISMTHVCSEVR
RLLGSFTKPLYPPPTNMAYHFNMAIEETSTSWDSGGPLSEDKAEAQRDPGTHLFLWAVVQ
NNKELAEISWEQCRDGICAALAASKILKNMAEEICDADEAEAMQELADHYEKHAIGVFSI
CHNSDEERAQKLLVRSSPFWGKTTCLRLALEANDKSFVAQSGVQALLTQIWCGELSVDNP
VWRVMVCMVFFPLIYTGFLVFRRDEVIHRENEKKEEIKTIETVTGSTIRTNSRAFDPNQQ
HLKPLSSWSRLVCLYSSPQVKFYWNIVSYFAFLFLFAVVLMTDFQATPSVGELLLYIWLM
SLVLEEIRQLFHDPDGFGFRKKAKMYIHDLWNILDVLSALLFIFGLAFRLVSFLSDKLFY
AGKILLCIDFVVFCLRLMAIFTISRTLGPKIIIVRRMMTDLFFFMFLLSIWVVAYGVAKQ
GILIHNDNRLDWIVRGAVYEPYLIIFGDFPSNIDNTAFKIDSCTMNGTDPLKPKCPVLNE
NQTPAFPEWLTIIMLCIYLLFANILLLNLLIAIFNFTFQQVQDNTDRIWKFQRYELIKEY
HSRPAAPPPFIILGHLYLFIRHVVLCKPPVRPKEFNNKLSEIEDEDLLSWEALMKDTYLI
STKQEQSQSMERRILDTAQKVTTITDLLEREEEPSSAAMVKRLAQLEEQVAQSYRALQWI
MDNLKSLNPATKEAQSLSQEPNSSDETPDTLINVSENEDGFHVNARQFHYPNSKIRRFPV
PEEKVPWEVSFSSYNPTHYASEDRAESDVSYMSLYRNPGGRTGIRGQGALSQLGPNLNLD
LIVTRWRDIERSVLEYLAVWDESQRTLAFPGGPVQSADLLPVTLKRTMGKTLFEILNAKV
SEGTKVSEGYVDDCRNTDNAWVETTVLNIHLDRTSQVMVNINNTLVSGHGFPQWQEVSSK
TRLGSNQRDSLRQVAGLHKIKF
NT seq
4389 nt
NT seq
+upstream
nt +downstream
nt
atgggagaagctgaggtggaatcggagctggttcacgctctggcaatcagcgtagccaga
ccctctaagcatctctctctctccccttctttccagcgctgtgcattcggctcctggatc
agggaaaacatctgcaagacggaatgtcgcctctttgaaaaaggtgtcagagaggatgtg
tgtaagtgtggttactcaaaaaacgatcatgtggaagaagccatcaagccagaggacttc
actggggagtcgtgggacaaacacagacacgttcgtgaagtccccactgatgcttacgga
gacatcagctttggtggttcaggcccaaagacaggaaagtatgtgcgagtgtccgcagac
accagccccgaagacctgtaccacttactgacagagcagtggaagctttctcctcccaac
ctgctgatctcagtgaccggaggagccaagaacttctatctgaaggctcgtctcaagaac
atgttccacagaggtctgatcaaagtggcccagacgacaggtgcctggatcatcaccggt
ggtacccatgcaggtgtgatgaagcacgtggggcaggcggtgagggaccacgccctgagc
agctcctcctcgcagggtcagatcgtagctatcggagtcgcaacatggggagtgattcac
aacagagacgctttggtgaattcagagggttgttacccagcccattatttgatggacatc
aatggccagggccggctgtcctgcctcgataacaaccacacccacttcctgctggtggat
gatgggaccaacggacgctacggtgtggagattgaactgcgtagtcgtctggagaggtgc
atctccgggaagcttctcggaaataaagtgagcggtgtgaccatccctgtggtgtgtctg
gttttggatggaggaccaggcactctgaataccatctataatgccgtgataaatggtaca
ccttgtgtggtcttggagggctctgggagaatagcagatttgattgcccaagtcgcagga
ctgccaatgaagcgggttactattgcccttgtccgccagttgatgaagaaattctttggc
caagaggaggaaacacaggtcataacatggaccaaaatgattcaggacatcatccagttg
cctcacctgctgaccgtgttcagagtaagcgaggatagccacggggatatggatgttgct
attcttcaagcactactcaaagcttcaaggaccagtgagtcacagtgctggaggaggcag
ctggagctggctattgcctggaaccgagtggacatagctgagactgagattttcactgaa
gagagccagtggaagtccagtgacctccactgggccatgctctctgccctcattggcaac
aagccggagtttgtgagtctgctcctggagaacggcgtgagtctgagggatttcctgcag
gacgaggaaacgctgtgcgagctctacaagcagcttcccggctgcttctttctccgcagg
ctggccaagcgggttcaaagctccagcagaattaggggaaaaaagttcaacatcaggcgt
cgaacgcgctgcgggcaagctgaaacaatctccatgactcacgtgtgcagtgaggtgcgt
cgcctgctgggcagtttcaccaagcccctctaccctcctcccaccaacatggcataccac
ttcaacatggctattgaggaaacatccacatcatgggattccggaggtccactcagcgag
gacaaggctgaagcacagagggacccaggcacacaccttttcctctgggctgtcgtccag
aacaataaggagctggctgaaatttcctgggagcagtgcagagacggcatttgtgctgct
ctggccgccagcaagatcctgaagaatatggccgaggaaatttgtgatgcggacgaggca
gaggccatgcaagagctcgccgatcactatgagaaacatgccattggtgtgtttagcatt
tgccacaacagcgatgaggagcgggctcagaagctgttggtccgttcatcaccattttgg
ggaaagacgacgtgtctgaggctggcactggaggctaatgataaaagctttgtagctcag
tcaggtgtccaggctcttctgactcagatctggtgtggtgagctttcagtggacaaccct
gtgtggagggtgatggtctgcatggtcttcttcccccttatctacactggctttctggtt
ttcagacgtgatgaagtcatccacagagaaaacgagaagaaagaggagatcaagacaatc
gagactgtgacaggaagtacaataagaactaactctcgtgcctttgaccccaaccagcag
cacctgaagcctctgagcagctggtccagactggtttgtctctacagctccccacaggtc
aagttctactggaatattgtgtcttacttcgccttcctcttcctgtttgctgtggtgctc
atgaccgacttccaggctacaccctctgtaggggagttgctgctctacatctggctgatg
tctctggtgcttgaggagatcagacagctctttcatgatcctgatggttttgggtttcgt
aagaaagccaagatgtacatccacgacctgtggaatattttagacgtcctctccgccctc
ctgtttatttttggccttgcttttaggttagtttccttcctgtcagacaaactgttctac
gcgggtaaaatcctcctctgcatcgacttcgtggtcttctgcctccgcctcatggccatc
ttcactatcagccgaactctgggacccaaaatcatcatagtcaggaggatgatgacggac
ttgttcttcttcatgttcctgctgagtatctgggtggtggcgtacggcgtggccaaacaa
ggcattctcatccacaatgacaatcggctggactggattgtccgtggggcagtttacgag
ccgtacctcatcatatttggagatttcccctccaatattgataatactgcatttaaaata
gactcctgcaccatgaacggcaccgatcccctgaagcccaagtgtccagtgttgaatgaa
aaccaaacgccagccttccctgagtggctcaccatcatcatgctttgtatttacttgctc
tttgccaacatactcctgctcaacctgctcatagctatcttcaattttacgttccagcaa
gtgcaggacaacaccgacagaatatggaagtttcaaagatatgagctcattaaggagtac
cacagccgcccagccgccccgcctcccttcatcatcctcggccatctctacctcttcatc
agacacgtggtgctgtgcaagccgcccgtcagacccaaggagttcaataataagctttct
gagatagaggacgaggacctgttgtcctgggaggcactgatgaaagacacatacctgata
tccacaaagcaggagcagagtcagagcatggagcgacgcatcctggacacagcccaaaag
gttacaaccataacagatctgttggagagggaagaggagccgagctctgctgccatggtg
aaaagactggcccaactagaggagcaggttgcccagtcataccgagccctgcagtggatt
atggacaatctgaaatctctgaatcctgccacaaaagaagcgcaatcactgagtcaggag
ccaaattcctcagatgaaacccctgacactttgataaatgtgtcagagaacgaggacggg
ttccacgtgaacgcccgtcagtttcactatccgaacagcaagatccggcgcttccctgtg
cctgaggagaaagtgccgtgggaggtcagtttcagctcatacaacccaactcattatgcc
tctgaagacagagcagagtccgatgtttcctacatgagcttgtaccgaaacccaggaggg
aggactggcatcaggggacaaggtgcactcagccaactgggtccaaatctgaacctagac
cttattgttacacgctggcgagacattgagagatctgttttggagtacctggcagtctgg
gacgagagccaaagaaccttggcttttcctgggggacccgtccaatctgctgatctgctg
cctgtgacgctcaagagaaccatgggaaagacgctgtttgagatactaaatgcaaaagtg
tcagagggaacaaaggtgtctgagggttatgtagatgactgcaggaacacagataacgcc
tgggtggaaaccaccgtcttaaacattcacctggacagaaccagccaggtgatggtaaat
atcaataacacgttggtgagcggccacggctttcctcagtggcaggaggtgagcagcaaa
accagactcggctcaaaccaaagagactctctgcggcaggttgctggcctgcacaagatc
aagttctga
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integrated database retrieval system
