Hippoglossus stenolepis (Pacific halibut): 118119805
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Entry
118119805 CDS
T08308
Symbol
cln5
Name
(RefSeq) ceroid-lipofuscinosis neuronal protein 5
KO
K12390
ceroid-lipofuscinosis neuronal protein 5
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Pathway
hsp04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
118119805 (cln5)
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Gene cluster
GFIT
Motif
Pfam:
CLN5
Motif
Other DBs
NCBI-GeneID:
118119805
NCBI-ProteinID:
XP_035030012
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Position
13:complement(17897519..17902625)
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AA seq
339 aa
AA seq
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MGSESVVSVGNMSGSVVCLSLLLFLDVGAQLRDNVRQQWPIPYRRFDRRPAADSYCEALF
PFCPTGDGDGRMPSMSDTDVISVYRLQTPVWEFKYGDLLGKFHIMHDAIGFSSKETGANY
TMEWYELFQLGNCTFPHLRPDVFAPFWCNQGAACFFGGIDDPHWSQNGTLEKIGEITGGQ
FNDMAQWVQDDNETGIYYETWTVRSDPGPNATVWFESYDCSQFVHRTYRKLSELGAKLSS
RSQTNYTKIYLYSGEPSYLGNDSAIFSQPALKNLATDIRTFYHRFRPHQSFIDFTISLLE
AYKKVVLDKSFYLYYNFEYWHLPMKPPYVQITYEEVPLP
NT seq
1020 nt
NT seq
+upstream
nt +downstream
nt
atgggaagtgagtcggttgtgtctgtaggaaacatgtcggggtcagttgtgtgtttaagc
ctgctgctgtttcttgatgtcggtgctcagctcagggacaatgtccggcagcagtggccg
attccctacaggcggtttgaccgtcggcctgctgccgactcctactgtgaagctctcttc
ccgttctgtcccaccggagacggcgatggacggatgccctccatgagcgacactgacgtg
atctcagtgtacagactgcaaacacctgtgtgggaattcaagtacggagatctgctgggg
aaatttcatatcatgcatgatgccatcgggttcagcagcaaagagacgggggccaactac
accatggagtggtatgagctgtttcagctgggaaactgcaccttccctcacctgcgaccc
gacgtgttcgcacctttctggtgcaaccagggagccgcctgcttcttcggcggcatcgat
gacccacactggtcacaaaacggcacattggagaaaataggagaaataactgggggccag
ttcaatgacatggctcagtgggtccaagacgacaacgagaccgggatctattacgagacg
tggacagttcgctcggaccccggacccaatgccacagtgtggttcgagtcttacgactgc
tcccagtttgtccaccgcacatacaggaaactctctgagctcggagccaaactctccagt
cgatcacaaaccaactacaccaagatctacctgtacagcggagagcccagttacctcggc
aacgacagcgccatattcagtcagcccgctctgaagaacctggcaacggacatccgtaca
ttttaccacaggttccggccgcaccagtcgtttatagacttcaccatcagtctactggag
gcgtataaaaaggttgtgctggacaagagcttttacctctactacaactttgagtactgg
catctgccaatgaaacctccttatgtgcagattacatatgaagaggtgcctttgccttaa
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