Hippoglossus stenolepis (Pacific halibut): 118120767
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Entry
118120767 CDS
T08308
Symbol
kdm2aa
Name
(RefSeq) lysine (K)-specific demethylase 2Aa isoform X1
KO
K10276
F-box and leucine-rich repeat protein 10/11 [EC:
1.14.11.27
]
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Pathway
hsp03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
118120767 (kdm2aa)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
hsp03000
]
118120767 (kdm2aa)
04121 Ubiquitin system [BR:
hsp04121
]
118120767 (kdm2aa)
03036 Chromosome and associated proteins [BR:
hsp03036
]
118120767 (kdm2aa)
Enzymes [BR:
hsp01000
]
1. Oxidoreductases
1.14 Acting on paired donors, with incorporation or reduction of molecular oxygen
1.14.11 With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
1.14.11.27 [histone H3]-dimethyl-L-lysine36 demethylase
118120767 (kdm2aa)
Transcription factors [BR:
hsp03000
]
Eukaryotic type
Zinc finger
CXXC CpG-binding proteins
118120767 (kdm2aa)
Ubiquitin system [BR:
hsp04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
118120767 (kdm2aa)
Chromosome and associated proteins [BR:
hsp03036
]
Eukaryotic type
Histone modification proteins
Histone demethylases
118120767 (kdm2aa)
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.1)
118120767 (kdm2aa)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PHD_4
zf-CXXC
F-box-like
JHD
JmjC
F-box
Cupin_8
PHD
LRR_At1g61320_AtMIF1
LRR_Zer-1
LRR_RPS2
LRR_4
Motif
Other DBs
NCBI-GeneID:
118120767
NCBI-ProteinID:
XP_035031919
LinkDB
All DBs
Position
2:complement(2021440..2039846)
Genome browser
AA seq
1358 aa
AA seq
DB search
MFLHRHKQRVLPSHMIFPVMMDDSKQRHSKRLRAGTRRRYHDDGISDEEIDGRRMFDLED
KVSSQRFTSDRIIRMEGKDLSYEFVQRCGLRDPIIFEKPDGLGIMMPDPDFSVNDVKLFV
GSRRMIDVMDVSTQKGTEMSMAQWARYYETPPCQREKLYNVISLEFSHTKLENLVKRPTT
VDLIDWVDKMWPRHLKERQRESTNSINDMQYPKVQKYCLMSVEGCYTDFHIDFGGTSVWY
HILRGSKVFWLFPPTPPNLELYENWVLSGKQGDIFLGDRASDCQRIELTQGCTFIIPSGW
IHAVYTPVDSMVFGGNFLHSFNIPTQLNICNIEDRTRVPGKFRYPFFYEMCWYVLERYVF
SLTRTSYLTPEFQKHSLGIGLMKPSSPDLAVEQVKEEEVVGGDSDEEPSEQQSDKPAAKI
HLTPFELEGLWNLLGKLESLPSNKKCVPAGIHNAPALITHIKALLKEHANDNSKLSYTGK
PIVKWPKRPSWYQPPPPPPTPPPRPKLASTPIIPRPQKPASSMSVLRRRRVRCKRCEACM
RPECGDCNFCRDMKKFGGPGKLKQTCVLRQCLSPGLPLSAVCEICKEPNQEESGDPSLIL
MECSNCAQIVHPACLSVQGEGLVNKDLPSCWECPKCVQGITDPESSGSDESLAASHQQHI
RPHGPLVLRLGPGPSATIGGPVGSQQDGEVVRCGFFPPPLPSCSSSSSASLLLVAAPLPS
QPFSSRLQSKGDRGEGNPLKRKSSSLLDARMAKIYRRQRHSHDGDDSASDDDDEASQRRK
MMLHARGGGHSSRRGFVPNRRGLLRGGSAQRGSRGLVTSGSSLLKLKRGMNMKESGRRGR
GVRLRGGSRMQRRGDDSEDSDDDDDDDDDDDDDDDDDDDDDDEEEEEEEDSEDGVKEQQL
RRRRRRRRTDYDEDEIEDSEGQEFDPEEEDMDTLEDDEEDDDGDEDGRWDSDPEPPVLLV
SDLNDDLLSGSYLTVTLQRPHKAKRQSGSIVPKLEAAMGPRTAAMGAGGQQGFIQRKTAL
SKPSRFKGTDTTADSVTLRGPGRQRMRGNHGDRGTRDCSASSSEDQEAAASSFQSPPSLL
SVLSFKDEGNERGGEKEVWVSVFRYLTRAELLACMTVCKAWYKWSCDKRLWSHLDVSRCS
PVSNQALAGIVKRQPTSLDLSWTPLAKRQLNCLLTRLPGLRELRVTGLSWSCLSALVSPT
LPYLRLLDLRWCEGLKDAQIKEIVLPPESSRSRLRNMVTLRLSGLDISDSTLRLLQRHMP
QLERLDLAHCKDITDSSIALLAASGTHTRNNLTELTLAGCSELTDGCLSYLKRLTSLNLL
DLRGCKSVSRRVCDAFISDLSHIALYCMMEEKLIQRLD
NT seq
4077 nt
NT seq
+upstream
nt +downstream
nt
atgttcctgcacagacacaagcagagagtgttgccctctcatatgatttttccagtgatg
atggatgactccaagcagcggcacagcaaaagactgcgagctggtacccggcgacgttac
catgacgatggtatttcagatgaggagattgatggaaggaggatgtttgacttggaggac
aaagtcagcagtcagaggttcacctctgacaggatcattcgcatggagggaaaagacttg
tcatacgagttcgtccagagatgtggtcttagggacccaatcatctttgagaagcctgat
ggactgggaatcatgatgcctgatcctgacttcagtgtcaatgacgtcaagctgtttgtt
ggtagcagacgtatgattgacgtgatggacgtgagcactcagaaggggacagagatgtcc
atggcccagtgggcacgttactatgagacccctccgtgtcagagagagaagctctataat
gtcatcagcctggagttcagccacaccaagctggagaacctggtcaagagaccgaccaca
gtggatctgattgactgggtggacaagatgtggcctcgtcacctgaaggagagacagagg
gagtccacgaactctatcaatgacatgcagtaccccaaagtacaaaaatactgtctgatg
agtgtggagggctgctacacagactttcacattgactttggagggacttcagtgtggtat
cacatactgagaggaagcaaggtgttctggctcttcccccccacccctccgaacctggag
ctctatgagaactgggtgctgtcagggaaacagggagacatttttctgggtgaccgggcg
tctgactgccaaaggattgaactcacacagggctgcaccttcatcataccctcaggttgg
attcatgctgtctacacccctgtggactctatggtgtttggaggaaacttcctgcacagc
ttcaacatccctacgcaacttaacatctgtaacatagaggaccgaacgcgggttccaggg
aagttccgttaccccttcttctatgagatgtgctggtatgtgttggagcgttatgttttc
agcctgaccaggacctcctacctcacaccagagtttcagaaacactcgttgggcattggt
ctgatgaagccgtcaagcccagatctggctgttgagcaggtgaaggaggaggaggtggtg
ggaggggacagtgatgaagagccttcagagcagcagtctgacaaacctgcagctaaaatt
catctgactccctttgaactggaggggctctggaacctgctgggtaaactggagtctctg
ccctccaacaaaaagtgtgtcccagctgggatacacaatgcccctgcactcattacacac
attaaggcacttctgaaagaacatgccaatgataattccaaactgtcctacacaggaaaa
cccattgtcaagtggccaaagcggccatcatggtaccagccgccgcctcctcctccaaca
cctccgcctcgtcctaaactggcctccacacccatcatcccacgaccacagaaaccagcc
tcctcaatgtctgtgctgagacggcgcagggtcaggtgtaagcgctgtgaggcctgtatg
agaccagaatgtggagactgtaacttctgcagagatatgaagaagtttggaggaccaggg
aaactcaagcagacctgtgtgctacgacagtgtctttctccgggcctccccctgtctgca
gtgtgtgagatctgcaaggaacccaatcaagaggaaagtggagacccctctctcatcctg
atggagtgttccaattgtgcccagatcgtccatcctgcctgtctctcggttcagggggaa
ggactggtgaacaaagacctgcccagttgttgggagtgcccaaagtgtgtccaaggaatc
actgacccagagtcatcaggcagcgatgaatcgttggctgccagccaccagcagcacatc
cgcccccatggccccctggtcctcaggctgggccccgggccctctgctaccatagggggt
cctgtgggttctcagcaggacggggaggtggttcgctgtggcttcttccctcctcctctt
ccttcctgctcttcctcctcctcagcatcacttctattggtggcggcccctctgccttct
cagccattcagctcgagactgcagtctaaaggtgacagaggtgaaggcaatccattgaag
cgcaaatcttcctccctcctggacgctcgaatggccaagatttaccgacgacagagacac
agccacgatggagacgactctgccagtgatgacgacgatgaagcctctcagaggagaaaa
atgatgctccatgctcgaggggggggccactcttccaggagggggtttgtccccaacagg
agaggtctgttgagaggaggctcagcccaaagaggaagcagaggccttgtaacttctggc
tcctccctcctcaagctaaagcgaggcatgaacatgaaggagagtgggcggaggggacga
ggggtgaggctgcggggaggctccaggatgcagcgaagaggagatgattcggaggactca
gacgatgacgacgacgatgatgacgacgacgatgatgatgacgacgacgatgatgatgat
gatgatgaagaagaggaggaagaggaggacagtgaagatggagtgaaagaacaacaactt
cgcagacgtaggaggaggcgcaggactgactacgatgaagatgagattgaggacagtgag
gggcaggagtttgaccctgaagaggaggatatggacacgctggaagatgacgaggaagat
gacgatggggatgaggatgggcgctgggattcagacccagaacccccggtcctcctggtg
tctgatctcaatgatgacctgctgagtggttcctacttgactgtcaccctacagcgcccc
cacaaggccaagagacaatctggctcgatagttccgaagcttgaagcagccatgggtccg
aggacggctgcgatgggtgctggtggtcagcagggcttcatccagagaaagacggctctg
tccaaaccctcacgattcaagggcactgacactacagctgacagcgtaacactaagagga
cctggcaggcaacgtatgcggggtaaccatggcgacagagggactagagattgctcagca
tcgtcttcagaggatcaggaagctgctgcatcctccttccagtctcctccgtccctgctg
tccgtgctgtcctttaaggacgagggtaatgagagaggcggggagaaggaggtttgggtg
tctgtgttcagatacttgaccagagccgagctgctggcctgcatgactgtgtgtaaggcc
tggtacaagtggagctgtgacaagcgtctgtggagccacttggatgtgagccgctgcagc
ccggtcagtaatcaggccctggcaggtatcgtcaaacgccagcccacctctcttgacctg
tcctggacccccctggccaaaagacagctcaactgtctgctcaccaggctcccaggtctg
agggagttgagggtgactggtctgtcgtggtcctgtctctcagcgttggtctctcccact
ctgccttacctgcggctgctggacctgcgctggtgtgaaggccttaaagacgcccagatt
aaagagatcgtcttgccacctgaatcctctcgcagcagactacggaacatggtgacactg
cgtctgtcgggtctggacatcagtgactctactctgaggctgctgcagcgccacatgcct
caactggagaggttggacctggctcactgcaaagacatcacagactcgtccattgctctg
ctggcagcatccgggacacacacacgcaacaacctcactgagctcacactggcaggctgt
agcgagttgacagacggctgtctgtcctacctgaagcgtctcacctctctgaatctgctc
gatctcagaggttgtaagagtgtcagcagacgagtgtgtgacgcctttatctccgatctg
tctcacatcgccctctactgtatgatggaggagaagctcatccagcgcctggactaa
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integrated database retrieval system
