Hippoglossus stenolepis (Pacific halibut): 118121396
Help
Entry
118121396 CDS
T08308
Symbol
ptprfa
Name
(RefSeq) protein tyrosine phosphatase receptor type Fa
KO
K05695
receptor-type tyrosine-protein phosphatase F [EC:
3.1.3.48
]
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Pathway
hsp04514
Cell adhesion molecules
hsp04520
Adherens junction
hsp04910
Insulin signaling pathway
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
118121396 (ptprfa)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
118121396 (ptprfa)
09150 Organismal Systems
09152 Endocrine system
04910 Insulin signaling pathway
118121396 (ptprfa)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
hsp01009
]
118121396 (ptprfa)
Enzymes [BR:
hsp01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.48 protein-tyrosine-phosphatase
118121396 (ptprfa)
Protein phosphatases and associated proteins [BR:
hsp01009
]
Protein tyrosine phosphatases (PTPs)
Class I PTPs (Classical)
Receptor PTPs
118121396 (ptprfa)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Y_phosphatase
fn3
I-set
Ig_3
Pur_ac_phosph_N
fn3_2
Ig_2
ig
Interfer-bind
PTP-SAK
Tc-R-P
DSPc
V-set
Y_phosphatase3
PTP-NADK
C2-set_2
PTPlike_phytase
Ig_C17orf99
ELFN_Fn3
Insulin_TMD
ICAM_N
Motif
Other DBs
NCBI-GeneID:
118121396
NCBI-ProteinID:
XP_035033135
LinkDB
All DBs
Position
14:complement(27650195..27836614)
Genome browser
AA seq
1916 aa
AA seq
DB search
MDLRFRLLSPLTRGALHLLLLARLVLPSHSESMPSFIKSPDDQTGISGGVASFVCQAVGE
PKPRITWMKKGKKVSSQRFEVIEFDDGSGSVLRIQPLRTHRDEAIYECTATNSVGEINTS
AKLTVLEEDQIPHGFPTIDMGPQLKVVERTRTATMLCAASGNPDPEIYWFKDFLPVDISS
SNGRIKQLRSGALQIENSEEADQGKYECVAVNSAGTRYSAPANLYVRVRRVPPRFSIPPT
NHDVMPGGSVNLTCVAVGAPMPYVKWMTSEVELTREEEMPIGRNVLELTNIQHSANYTCV
AISSLGMIETTAQITVKALPKPPASLIVTETTATSVTLTWDSGNPESVSYYVIQYRPKLS
ENGFQEVDGVATTRYSIGGLSPFSEYEFRVMAVNNVGRGPPSGIVDTRTSEQAPSSPPLH
VQARMLSSSTMLVQWEPPEEPNGQIRGYRVYYSSTHNTPLSAWQKHNTDNNQLTTISGLT
TDITYSLRVLGFTSVGDGPPSDVLQIKTQQGVPAQPSGFEAEAELDSRIMLSWLWPVQEP
IISFELLYWEANNPTDKHRVTFEPAGFYAVDGLKPDTVYMFSLAARSEMGLGVFTRPIET
RTAQSTPSAPPQEVRSLSLSSTSIKVSWEASPTDSRHAEIVRYSLAYQAVTGEDMERHQV
SGIGADVTSYVLEGLEKWTEYMVWVRAHTEVGPSPESPASHIRTQEDVPGAPPRKLEVDT
LNSTALRVTWKPPLSVKQHGQIRGYQLVYSRLENGEPHGQPVIVDISLPDAQDTIITGLL
PETTYSLTVAAYTTKGDGARSKAKVVTTTGAVPGKPTMMISTTIGNTALIQWQPPKEMVG
EHVGYQLLYKRVEEEAFTIKDFRKIDDHFTVTGLHKGATYIFKLCAKNRAGNGEEYVKEI
STPEDIPSSYPPNLSVVGLTATSTQLAWDPPPLSQRNGKIVKYVVVYRDINIQHNNTNNT
TETLMTVQGLQPDTTYDIRVQAFTSKGGGPISPSIQSRTMSTSMPDLPPVFTKNFGVKAV
TKTSVLLTWEVPETYTSQVPLKILYNQKSVEVQGNLKRKLITQLQPDTDYSFVLMSRGNS
AGGLQQQVSIHTAPDLLRVKPALYQHDVEEGGRVTVSLPRAPAGAPIRWYYLVVVPVTPA
SLSRWESPEDMDIHELLEAGADSKLQRKRRQSQDFLQPYITAKLDVLPEIFTLGDEKKYN
GYYNKPLPGQQQYRCFVLADLTDHESQRMFAASPFSEPIMVKLHSGMSRHTEDPEMLWVM
GPVLAVILIIIIVIAILLFKSKQERKRTSPAKDEHMAGVKDSLLAHSSDPVEMRRLNYQT
QGSSALSCCPNTPRMREHPPIPVSDLADHIERLRANDGLRFSQEYESVDPGQQFTWEHSN
LEVNKPKNRYANVIAYDHSRVILTPVDGVPGSDYVNANYIDGYRKQNAYIATQGPLPETL
TDFWRMVWEQRTCTIVMMTRLEEKSRVKCDQYWPSRGTETYGMIRVTMLDTVELATYSVR
TFALYKNGSSEKRDVRQFQFMAWPDHGVPEYPTPTLAFLRRVRACNPPDAGPMVVHCSAG
VGRTGCLIVIEAMLERMKHEKSVDIYGHVTCMRAQRNYMVQTEEQYIFIHEALLEAAICG
NTEVPARSLYAHIQKLTHTPPGETVTTMELEFKKLANSKAHTSRFISANLPCNKFKTRLV
NIMPFESTRVCLQPIRGVEGSDYINASFIDGYKQQKAYMATQGPLAETTEDFWRMLWEHN
STIVVMLTKLREMGREKCHQYWPAERSARYQYFVVDPMAEYNMPQYILREFKVTDARDGQ
SRTIRQFQFTDWPEQGVPKTGEGFIDFIGQVHKTKEQFGQDGPITVHCSAGVGRTGVFIT
LSIILERMRYEGVVDLFQTVKMLRTQRPAMVQTEDQYQLCYRAALEYLGSFDHYAT
NT seq
5751 nt
NT seq
+upstream
nt +downstream
nt
atggaccttagattcagactgctgtcacctctcaccaggggagctcttcatctcctgctg
ctggccagactggtgctgccttctcactcagagagcatgcccagcttcattaagtcaccg
gacgatcagacaggtatatcaggaggagtggcatcgttcgtatgccaggcagtgggtgag
ccaaaacctcgcattacctggatgaagaaggggaagaaagtcagctctcagcgctttgag
gtcattgagttcgatgatggttcgggttctgtgctgcgtatccagcctttgaggacccac
cgtgatgaggccatctatgaatgcacagctaccaatagtgttggagagatcaacaccagt
gccaagcttactgtgttagaggaggaccagatccctcatggtttccccaccatagacatg
gggccccagcttaaggttgtggagagaacgcgtactgctacgatgctgtgtgcagccagt
ggtaaccctgacccagagatctactggttcaaagactttctacctgtggacatcagcagc
agcaatggacgcattaaacagctgcgttcaggagcacttcagattgagaacagtgaggag
gcagaccagggcaagtacgagtgtgtggcagtcaacagcgctgggactcgctactctgct
ccagctaacctttatgttcgagttcgtcgtgtgcctccccgtttctccatccctcccacc
aatcatgatgtaatgcctggaggcagtgtcaacctgacctgtgtggcggtcggcgctccc
atgccttatgtcaagtggatgaccagtgaggtggagctgacccgagaggaggagatgcct
attggccgcaatgtcctggagctcaccaacatccaacattctgccaactacacttgcgtg
gccatatcctccctgggcatgattgagaccacggcccagataaccgtcaaagctctgcca
aagccacctgcctccctcattgtgaccgaaactacagcaaccagtgtcaccctgacctgg
gactctggtaatcctgaatcggtgtcctactatgtaattcagtaccgccccaaactgtct
gaaaacggcttccaggaagtagatggagtagccaccacccgatacagcatcggcggcctc
agccccttttccgaatatgaatttcgcgtaatggctgtcaacaacgtcggccgggggcct
cccagtggtattgtggacactcgtacaagtgagcaagcaccctcatcccctcctcttcac
gtccaggcgcgcatgctgagttccagcaccatgctggttcagtgggaacctccagaggag
cccaacggccaaatacggggctacagggtctactacagctccacgcacaataccccacta
agcgcctggcagaaacacaacacagataacaaccagctcaccaccatctcaggcctgacc
acagatatcacatacagcctgagagtactgggctttacctcagtgggagacggacctccc
tctgatgttctgcagatcaagacccagcagggagttccagctcagccgtctgggtttgag
gctgaagcagaactggattcacgcatcatgctgtcatggctttggccagttcaggagccc
atcattagctttgagctgctctactgggaggccaacaaccctacagacaagcatcgcgtc
actttcgagcccgcaggtttctacgcagttgatggtctgaagccggacacagtctatatg
ttttccctggcagcacgatctgagatgggtttaggagtctttactaggccaattgagacc
agaactgcccaatccaccccttcagcccctcctcaggaggtacgctcgctcagcctcagc
tccacaagcatcaaggtgagttgggaggcatctcccacagacagccgccatgcggagata
gtgcgctactccctagcctaccaagcagtaacaggggaagacatggagcgccaccaggtg
tcagggattggtgccgatgtcaccagttacgtgctagagggcctggagaagtggactgag
tatatggtgtgggtgagggctcacactgaagttgggcccagcccagagagcccagcatcc
cacatcagaacccaggaggatgtgcccggagctcctcccaggaagctggaggtggacacc
ctcaactccactgctctcagggtgacctggaagcctcccctgtctgtgaagcagcatggc
cagatcagaggctaccagctggtctactccaggctagagaacggggagcctcatggccag
ccagtcatcgtggacatttcactccctgacgcacaggataccattataacaggtctgctg
ccagagacgacctactcattgactgtggctgcatataccactaagggtgatggagctcgc
agcaaggctaaggtggtcaccaccacaggagcagtacctggtaagcccaccatgatgatc
agcaccactatagggaacacagccttgatccagtggcagcctcctaaagagatggttggg
gagcatgtgggataccagctgctgtacaagagagtagaggaagaagctttcaccatcaaa
gacttcagaaagatagatgaccatttcacagtcaccggcctccacaagggtgccacctac
atctttaaactgtgtgccaaaaaccgagcaggcaatggggaggaatatgtgaaggagatc
agcacccctgaagacatccccagcagctaccccccaaatctgagtgtggtgggactgacc
gccacctccacccaacttgcctgggacccccctcctctgtcccagaggaatgggaaaatt
gtgaagtacgtggtggtgtatcgtgatatcaatatccagcacaataacaccaacaatacc
acagaaacactgatgaccgtccaaggtttgcagcctgacacaacctacgacatcagagtc
caagcttttacgagtaaggggggaggtcccatcagccccagcatccagagcaggaccatg
tccacctccatgccagaccttcccccagtgttcaccaagaactttggagtgaaggctgtg
acgaaaacctctgtgctgctgacctgggaagtgccagaaacatacacatctcaagtgcct
ctcaagatattgtacaaccagaagagtgtggaggtccaggggaaccttaagaggaagctg
atcactcagcttcaaccagatactgattactcctttgtgctgatgagtcgggggaacagt
gccggtggtctccaacagcaggtgtccatccacacagctcccgacctcctgagggtgaaa
cctgctctgtatcagcatgatgtggaagagggtgggagagtgaccgtcagtctgccccgg
gcccctgctggagccccgatcaggtggtactacctagtggttgtccctgtcaccccagct
tctctgagcagatgggagagcccagaagacatggacatacatgagctcctggaggctggt
gctgacagcaaactgcagagaaagagaagacagagccaggacttcctgcaaccctacatc
actgccaagctggacgtcctgcctgagatcttcactctgggtgatgagaagaaatacaat
ggctactacaacaaacccctcccaggccagcagcagtatcgctgctttgtcctggctgac
ctgacggaccatgagtctcagaggatgtttgcagcgagcccgttctccgagcccatcatg
gtgaagctccacagtgggatgagccgacacactgaggacccagagatgctgtgggtgatg
ggtccagtcctggctgtcattctcatcatcatcatagtcattgctattctactcttcaaa
agcaaacaagaaaggaaaagaacgtctccagccaaggatgagcacatggcaggggtcaag
gactcactgctggcccattcctcagatcctgtggagatgaggaggctcaactaccaaaca
caaggttccagtgccctcagttgttgtcccaacactccaagaatgagggaacatcctccc
atccctgtctctgacctggcagaccacatagagagactcagggccaacgacggactgcgc
ttctctcaggaatatgagtctgttgatccaggacagcagttcacctgggagcactcgaac
ctggaggtcaacaagccaaagaaccgctatgcaaatgtgatcgcttatgaccactccagg
gtcatcctcacacctgtggatggagttccaggtagcgactacgttaatgccaattacatt
gatggctacaggaagcagaatgcttacatcgccacacagggtccgctgccagagacactg
actgatttctggaggatggtgtgggagcagagaacctgcaccattgtaatgatgacccgt
ctggaagagaagtcacgggtgaagtgtgaccagtattggcccagtcgaggcacagagaca
tatgggatgattcgggtgaccatgttggacactgtggagctggctacctacagcgtacgc
acatttgccctttataagaatggctcaagtgagaagagagacgtcagacagttccagttc
atggcatggcctgaccatggagtgcctgagtatcccactccaacgctggcctttcttcgc
agagtcagggcctgtaaccctccagacgctggaccaatggtggttcactgcagtgctggt
gtcgggcggacaggctgcctcattgtgattgaagccatgctggagaggatgaaacatgag
aagtccgtggacatttatggtcatgtaacgtgtatgcgagctcagaggaactacatggtg
cagacagaggagcagtacatattcatccacgaggccctgctagaggctgcaatatgtggc
aatacagaagtccctgcacgcagcctctatgcccacatccagaagctcacccacaccccc
cctggagagaccgtcaccaccatggaactggagttcaagaaactggccaactcaaaagca
catacctcaagattcatcagtgccaacctaccgtgtaacaagttcaagacccgcctggtg
aacatcatgccttttgagtccacccgcgtctgcctacagccaataagaggggtggagggc
tcagactacatcaacgccagcttcatcgatggatacaagcagcagaaagcatacatggcc
acccagggcccgttagctgagaccacagaggacttttggagaatgttgtgggaacacaac
tccaccattgtagtgatgctcaccaagctccgtgagatgggacgggaaaagtgccatcag
tactggcctgctgagcgttctgcgcgctaccagtactttgttgtggaccccatggctgag
tacaacatgcctcagtacatcctgagagagttcaaagtcacagacgccagggatgggcag
tcgaggaccatcagacagttccagttcactgactggccagagcaaggagtgccaaaaact
ggggagggattcattgactttataggccaggtccataaaactaaggagcagtttggacaa
gacggaccaattactgttcactgcagtgctggtgttgggcggaccggtgtgttcatcacc
ctgagcatcatcctggagagaatgaggtacgagggagtggtcgacctcttccagactgtc
aagatgctccgcactcagaggccagccatggtgcagacagaggaccagtaccagctgtgc
taccgggctgctctggagtatctgggaagctttgatcactatgcaacataa
DBGET
integrated database retrieval system
