Hippoglossus stenolepis (Pacific halibut): 118121973
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Entry
118121973 CDS
T08308
Symbol
ttc3
Name
(RefSeq) E3 ubiquitin-protein ligase TTC3 isoform X1
KO
K15712
E3 ubiquitin-protein ligase TTC3 [EC:
2.3.2.27
]
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
hsp04121
]
118121973 (ttc3)
Enzymes [BR:
hsp01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
118121973 (ttc3)
Ubiquitin system [BR:
hsp04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
118121973 (ttc3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TTC3
TTC3_DZIP3_dom
wHTH_TTC3
TTC3_9th
zf-RING_2
TPR_2
zf-rbx1
TPR_1
zf-C3HC4_2
zf-C3HC4
TPR_11
TPR_19
TPR_17
zf-RING_UBOX
TPR_16
zf-RING_5
zf-ANAPC11
zf-RING_11
Motif
Other DBs
NCBI-GeneID:
118121973
NCBI-ProteinID:
XP_035034222
LinkDB
All DBs
Position
15:complement(13545509..13567712)
Genome browser
AA seq
1753 aa
AA seq
DB search
MPQLEKMSDSDSDSDFVQWDNFRHRAIERSDVVFSPLERDFDRWDFLPAATKQETGQRMK
ICTLWLPILLQREESGFNVSWAIHIGLIDALESEDISLKCLHRIETVEAILRALEKGSLK
RNQTKHIFWISNMFNVNQSSPEVLEDALNWLERTGEPAIRRRVLDLGHPRTCYMALHHIF
TEYANYIQAMCTNLERTMKSLMAQPPDQFVERSEAMKQKGNENYKKSQYEDAVQFYSKAI
KYYPDNHIIYGNRAQCYIRCKKYLKAVGDGKRATLINPLWAKGHYRYCDALFSLGEFKRA
IEANSSAQSLCKGDHEGLKDLEQQQLKFIQAIKELKGGRPNKNKRPDSTNGAEAAVKCTK
LGTAKSVSVQTKVSEVKMDKPPGKKTEIAQKKVATKDPKPTKSEISSNSGQTNVGVKMES
ITTAKKKSKSKSNPPAAENQKVPDSKAAVCKELRSLVQDAHTALADLRSRNAEQAFSQAL
AILETNTPKELGLSTLDVLLLLYGRTSALTEIGQPEELTEAQKLMEKMKSFEERTFQCLV
FYATGRVYLKENRFAVALDQFSDSLQMVKNQITPGILTWPLTKEIVKETQTDYFKGILER
FIEMCKFPPIPDAVCRLEQCRGSLKAEIYLTDPDFKGFIQLCCCQSCTVEYHIACWKTLK
TSTFSEKNEKDFLQEECLTPDCFGQICSIKIIGPTGLLKCKFEATILKPQTPKKPKVNPK
CTSLKKSKPKVEHRPKRKQLELSFQEKPPISNEILQQNDDSATQSEQKAWLLYRDRVLLQ
ISQNMELLREEKSLQGSALIISLKPWLELDSKRRNQLAERMLNWQQEPLETFCRAVELLL
ERKNRVWARVLIEMLSSSLDVNQKLNNWAFQLNNAGLNAARSFIQCNAEHLEQLDLALLL
TFGPLQEMILAKLGTRPELFSSIGLTVTEYLKQASPQDMRLFIWTLEEHREEYLTCHTIL
DDYFDMDGHFSVLKKSDENQNNSPIKTKGRGRKKKQRETKGVIVLSGMRSVTPRDEWEQD
LFEDDSLSFLHPADPFSVPSHLREQVADFENQYNGIPHRSHYKNILDNNPDPTKESLYDY
FAQILEEHGPLMAEDTLLVGELKYFPPVAQQKIQQAGSFESFLLESLRFIKMGRCIGLAK
HAVSLQQAGHGAILDDLDIIVDPDTNHVSTDLHEPVFPRYGGNSSSAQTQVHPILPNPYT
FSFKSACEVLPYEDSFYRWSSRDSQQPSPYLFDRSELDHVSDSDVGVLDIDPYLGEVASW
TSVENLLRKHQAVQTCPETMSSVAVNTELHMRFESCEGDINKKEKSNKRLEQQIKEMANG
SVNQKYKDDITALEEDIRKITANIQVTNRELTLFQQRLEEEVRKDQKEKKANQEVLKSLK
LETEELVEEQGSLSRNIREKNTCYEAKLRDFLELGNQSAAEKSSLEDEIKRRKASVTSAT
KRSHTAQLLAVENSREQGLCSLYKERADANAFLTKLDEVAHRFPNHNLEINRNTWRSNVQ
EIEKKTSIAETQYQEQFDQVKSGRRVSELVLSNINNPSETPAKPLSGAAGSPPLVQQPAA
PAAAEAPAAPPPTQHKPPTRTLEPPHTIFDKTIEGLSSIFPDYTRAELMRFVQELRSSSG
GSLSNMALQDLVGGATQLILDHQELNSVRSNIVGPGRPAQSGIPPYVVTAPVWQPVGFQR
STYSDAINVEDPCIICHEDMSPDSMCVLGCRHSFHKDCIKSWLKEQSTCPTCRNHALLPE
DFPALLGRRRQAP
NT seq
5262 nt
NT seq
+upstream
nt +downstream
nt
atgccgcaattggagaaaatgtcagattcagactctgattctgattttgttcaatgggac
aatttcagacaccgagcgatagagagaagtgatgtagtcttcagtccattagagcgtgat
tttgatcgatgggactttttacctgccgctaccaaacaagaaactggacagcggatgaaa
atttgtaccctctggcttcccattcttctgcagcgtgaagaatccggctttaatgtttcc
tgggctatacatataggcctaattgatgctctggaaagtgaagatataagtttgaaatgc
ctgcacaggatcgaaacagtggaagcaattctcagagccttggagaaaggaagtttgaaa
aggaaccaaacaaagcacattttctggataagcaacatgtttaacgtgaatcagagttcc
ccagaggttttggaggatgcgttaaactggttggagcgaacaggagaaccggctattcgc
agacgtgtcctggatctcggccacccacgcacatgctacatggccctgcaccatatcttc
actgagtatgccaactatattcaggccatgtgtactaaccttgagaggacaatgaagtca
ctaatggctcaaccgcctgaccagtttgttgagagaagcgaagcaatgaagcagaaagga
aacgagaactataagaaaagtcagtatgaagatgctgtgcagttttactccaaagccatc
aaatattaccccgataaccacatcatttatggaaacagagcccaatgctatatccggtgt
aagaagtatctaaaggcagttggtgatggaaaacgtgctacactgataaatccactctgg
gcaaagggtcactaccgctactgtgacgctttgttctcattgggagaattcaaacgagct
attgaagccaacagctcagcccagagtctgtgtaagggtgaccatgaaggactcaaagac
ttggaacaacaacaactcaagttcatccaagcaataaaagaactcaaaggtgggcgtcca
aacaagaacaaaagaccggacagcacaaacggggcagaagcagctgtaaaatgtacgaag
cttggaacggcaaaaagcgtatctgtacagaccaaggtctccgaggttaaaatggacaaa
ccaccagggaaaaaaacagagattgcacagaagaaggtcgctactaaagaccctaaaccc
acaaaaagtgagatttcttcaaacagtggacaaactaatgtgggggttaaaatggagtca
atcactacagcaaagaagaaatcaaagagcaaaagtaatccgcctgcagctgagaaccag
aaagtgcccgatagtaaagcagctgtgtgtaaagagttgaggtctttggtgcaggatgcc
cacaccgctctggccgacctccgcagccgcaatgcagaacaggccttcagccaggcactg
gccatactggaaactaacacacctaaggaacttggactttccacattggatgtactgttg
ctgctgtatggccgcacatctgccctgacagaaatcggacagcctgaggaactcacagaa
gcacaaaaactgatggagaagatgaagtcgtttgaggagcggacgtttcaatgtctggtt
ttctatgccactgggagggtgtatctcaaagagaacaggtttgcagttgctctggatcag
ttctcagattctctgcagatggtgaagaatcaaataactcctggtatactcacctggccc
ctaactaaagagattgtcaaagagacacaaacagactatttcaagggaatcctggaaaga
tttatagagatgtgcaaattccctcctattcctgatgctgtatgtcgacttgagcaatgc
cgaggctctttgaaagctgaaatctacctgactgacccagattttaagggcttcattcag
ttatgttgctgtcagagctgtactgttgaataccacatcgcctgttggaagacactaaag
acatcaaccttctctgaaaagaatgaaaaggatttcttgcaagaagaatgtttgactcca
gactgtttcggccaaatctgtagtatcaaaatcattggaccgacgggcctgttgaaatgc
aagtttgaagctaccatcctcaaaccacagactcctaagaagccaaaagtgaacccgaaa
tgtacaagtctgaagaagtcaaaaccaaaggtcgagcaccggcccaagaggaagcagctc
gagctgtcgtttcaagagaaaccgccaatcagcaacgagatcctgcagcagaacgacgac
tctgcaactcagagtgaacagaaagcctggttgctgtacagggatcgggttctactgcag
atcagccagaacatggagttgctgagagaggagaagagcctccaggggtcagccctgata
atcagcctgaagccctggctggagctggactcgaagaggaggaaccagctcgctgagagg
atgctgaactggcagcaggagcctttggagacgttttgtcgggctgttgagctcctgttg
gagaggaagaatcgggtgtgggctcgtgtcctgatcgaaatgctcagtagctctctggat
gtaaatcaaaaactcaacaactgggcatttcagctcaacaatgcaggcctgaacgctgcc
agatccttcatccagtgcaacgcagaacacttggagcagctggacctcgctcttctgctc
acctttggcccattacaggagatgattttagccaagctcggtacaaggcccgagcttttt
tcaagtattggcttgactgtgactgaatacctaaaacaggcctcaccacaggacatgaga
ctctttatctggactctggaggagcacagggaggagtacctgacctgccacactatactg
gatgactattttgatatggatggacatttttcggtcttaaaaaagtctgatgaaaatcaa
aataattctcctatcaagactaagggtcgaggtcggaaaaagaaacagagagagacaaag
ggtgttattgttttgtctggcatgagaagcgtaactccaagagatgagtgggagcaagac
ttatttgaagacgactctttatcattccttcacccggctgatccatttagtgtacccagt
cacctccgagagcaagtggctgattttgagaaccagtacaacggcatcccacacagaagt
cactataaaaacattttggacaacaaccctgacccaacaaaagagagtttgtacgactac
tttgcccagatcttggaggagcacggtccgctgatggctgaggacaccctgctggtcggt
gaactgaaatatttccctcccgtggctcagcaaaagatccaacaagcgggcagcttcgag
tccttcctcctggagtctcttcgcttcataaagatggggagatgtatcggcctggctaag
catgctgttagcttgcagcaggcaggacatggagccatcctggatgacctggacatcata
gtggatcctgacacaaaccatgtatctactgatttgcatgaacctgttttcccaagatat
gggggcaattcttcatctgcacagactcaagtccatcccatcctcccaaatccttataca
ttttccttcaagtcagcttgtgaagttttgccgtatgaggacagcttctaccgctggagt
agcagggacagtcaacagccatccccctaccttttcgacagaagtgagttggatcatgtc
agtgattctgatgttggagttttggatattgatccatatctgggtgaagttgcttcttgg
acaagtgtggaaaaccttttgaggaaacaccaagcagttcagacatgtccagagaccatg
agcagtgtcgcagtgaatacagagcttcacatgcgttttgagagctgcgagggcgacatc
aacaaaaaggagaagagcaacaagaggttggagcagcagatcaaggaaatggcaaatggc
agcgtcaaccaaaagtacaaagacgacatcaccgcccttgaggaagacatacggaagatc
actgccaatatacaagtgaccaatagggagctgacactgttccagcagaggctggaagag
gaggtgagaaaggaccagaaagagaagaaggccaaccaggaagtactgaagtccctcaag
ctggagacagaagagttggtggaggagcagggaagtctgtcccgaaacatccgagaaaag
aacacctgctatgaggcaaagttgagagatttcctggagctgggcaatcagtcagcagca
gagaagtcgagtctggaggatgagatcaagcgccgcaaagcttcggttacctcggcaacc
aagaggtctcacacagctcagttgttggcagtggagaacagccgggagcaaggtctgtgc
agcctctacaaagagcgggcagacgccaacgcttttctcaccaaactggatgaagtagct
cacagattcccaaaccacaacctggaaattaatagaaacacctggagatccaatgtccaa
gaaattgaaaagaaaacctccattgctgagacccagtaccaggagcagtttgatcaagtg
aagagcgggagacgagtcagtgagttagtcctaagcaacataaacaacccatctgagact
ccagcaaaaccactctctggagcagccggctccccaccgctcgtccagcagcccgcagct
ccggcagcagctgaggctccagccgctccgcctccaacgcagcacaaacctccaacgagg
acactggagcctccacacaccatctttgacaaaaccatcgagggcctatcctccattttc
cctgactacacaagggccgagttgatgaggtttgttcaggagctgcgttcctccagcggt
ggaagcctgagcaacatggcgctgcaggatttggtcggcggagcgactcagctgatcctg
gaccatcaggagcttaattcagtgagatccaacatcgtgggacctgggagaccagctcag
agtggcattcccccttatgtagtcacagctcccgtctggcagccggttggattccagaga
tccacatattctgatgcaatcaatgtggaggatccctgcatcatctgtcacgaggacatg
agtccagacagcatgtgcgtgctgggctgcagacacagctttcataaagattgcattaag
tcgtggctgaaggagcagagcacatgtccgacctgcaggaaccacgccctgctgcctgaa
gacttccccgcgctgctgggccggagacgccaagctccgtaa
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integrated database retrieval system
