Hippoglossus stenolepis (Pacific halibut): 118121994
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Entry
118121994 CDS
T08308
Name
(RefSeq) collagenase 3
KO
K07994
matrix metalloproteinase-13 (collagenase 3) [EC:3.4.24.-]
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
hsp01002
]
118121994
Peptidases and inhibitors [BR:
hsp01002
]
Metallo peptidases
Family M10
118121994
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Gene cluster
GFIT
Motif
Pfam:
Peptidase_M10
Hemopexin
PG_binding_1
Reprolysin_3
Reprolysin_5
DUF4953
Reprolysin_4
Peptidase_M54
Motif
Other DBs
NCBI-GeneID:
118121994
NCBI-ProteinID:
XP_035034266
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All DBs
Position
15:3740462..3744501
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AA seq
471 aa
AA seq
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MRSSTVCLLLSLAVAVYCVPVAEITVQDESLAESYLKTFFNLTEEQGPVSRRGISPVTKK
LSEMQRFFGLQITGTLDTDTISMMKKPRCGVPDGNIARFSTFGSNLKWEKNSLTYRIENY
TPDMSRSEVDNSMEKALQVWAKVTPLRFTRIYSGTADIMISFGRRSHGDYYPFDGRDGIL
AHAFAPSPGIGGDAHFDDDETFTFRSNAGYVLFMVAAHEFGHSLGLSHSDDPGALMYPTY
TYRNPDTFVLPRDDVKGIQSLYGPNPKKDPSEPTAPTTPDACDSTMVLDAVTTLRGEMFF
FKDSFFWRSYPQSRTPQQSLITNFWSSAPNNIDAAYESRQSDRIFFFKGRKVWAFSGYNP
VRGYPKRLTSIGLPRWVKKIDAALYDVQSGKTLFFSGEYYYSYDEVRKTMDRGFPKRVDQ
TFSGLKKVTAAFQYRGFTYIYSGPYMFEYDLRTGRLYRVLRNSYFLRCTNF
NT seq
1416 nt
NT seq
+upstream
nt +downstream
nt
atgaggtcttctactgtgtgtcttttactgagcctggcagtggcagtttactgtgtgcca
gtagcagaaattactgtgcaggatgaaagcttggcagagagctatctgaagacattcttc
aacctaacagaggaacaaggtccagtatccaggcgggggatcagtccggtgaccaagaag
ctgtctgaaatgcagagattctttggtctccagatcaccgggacgctggacacagacacc
atctccatgatgaagaagccccgctgtggcgttccagatggcaacatcgcccgtttctcc
acgtttggaagcaacctcaagtgggagaaaaacagccttacctacaggattgagaactac
acacctgacatgtccaggtcagaggtggacaactccatggagaaagcgctgcaggtttgg
gccaaagtcactcccctgagatttacgagaatctacagtggcaccgcggacatcatgatc
tctttcggccgccgatctcatggagattattacccctttgatggccgtgatggcattctc
gctcacgccttcgccccgtctcctggcatcggaggggatgctcattttgatgatgatgag
accttcaccttccgttccaacgcaggctatgtcctcttcatggtagctgcccatgaattc
ggccactccctgggcttgtctcactctgatgatcctggtgccctcatgtaccctacatac
acatacagaaaccctgacaccttcgttctgccccgtgatgatgtcaaaggcatccagtct
ctctatggtccaaatcctaaaaaggatccttctgaacctactgccccaaccacccctgac
gcctgtgattctactatggtattggatgctgtcaccaccctgagaggagagatgttcttc
ttcaaagacagcttcttctggcgtagctaccctcagagcaggacacctcagcaaagcctc
atcacaaacttctggtccagtgcccccaacaacatcgacgctgcttatgagagccggcag
tcagacagaatctttttctttaaaggtcgcaaagtgtgggcctttagtggctataatcca
gtgcggggctatcccaaaagacttaccagtattggtctgccaagatgggtgaagaaaatc
gatgcagccctctatgacgtacaatctggcaaaactctgttcttttcaggcgaatattac
tacagttatgatgaggtcaggaagactatggaccgaggattccccaaacgtgttgatcag
accttctctggactgaaaaaggtgactgcagctttccagtacagaggttttacatacatc
tacagtggaccctacatgtttgagtatgacctgaggaccgggaggttgtaccgtgtattg
aggaacagctacttcttgcgctgcactaacttctag
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