Hippoglossus stenolepis (Pacific halibut): 118123263
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Entry
118123263 CDS
T08308
Symbol
smcr8a
Name
(RefSeq) guanine nucleotide exchange protein smcr8a
KO
K23611
guanine nucleotide exchange protein SMCR8
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Pathway
hsp04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
118123263 (smcr8a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
hsp04131
]
118123263 (smcr8a)
Membrane trafficking [BR:
hsp04131
]
Autophagy
Other autophagy associated proteins
Rab associated proteins
118123263 (smcr8a)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SMCR8_C
Folliculin
Motif
Other DBs
NCBI-GeneID:
118123263
NCBI-ProteinID:
XP_035036470
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All DBs
Position
16:3695766..3703008
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AA seq
945 aa
AA seq
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MIGSPDVVAFTKEDEFGPTGPDPWALPEEFSVPLHPLADSNPWAKTSFAKFTKDFILISE
FSEQVGPQPLLTIPPDPKVCGTFDLNYFSLRIMSVDYQASFVGHPPGSGYPRLSFVEDSR
VVLGDSKEGAFAYVHHLTLYDLEARGFVRPFCMAYVSADERKIMLQFQELSLRFLQASEC
LKAGNRRAFAKELQRKLQDLEYTHSVLQREEGLQREAGPQCMYSAHAVEKANELANVEKS
IYEHRDLLRQISSFHCRPRRDPHAVTCQKCMTQCLSECETLLEKYAKLANPFCYTDTGRK
GDEGQGQINDEAGKEEVAEDDDEGVKRRPSYTPQLIKAKSAKCFDKRLKTMQELCDDTFY
EATMGLLKETERSFRGDLCYLHTRRLDKSLRRRQRITNFLFEEDLGDDAEDEGGVLRPFC
AVNHAVNNFTLSNPPPIVLGPEPLELDSLAPPDPRDPTSETSHTQESELGLGMSHLDSSP
SDQTQESSDGTKGSFSSDKSGMGPAEKQQSLASVRSEHPDPDPDSDLTPDPDHNTDLERE
SSSEDMETTAGEDEGDNGGDDTPVSLLEVVSELEASREDDCERVSEIESDLLVPIDTACC
MSQEGFLYEASAPEKTPHLDQSSNHQSSPTAVVNQEPQSLPLLQDYYAVGSLSSENKASG
LELPVGLLGDAVSRTSAEDGSDCTMSASTGSDRAASPLGYGAVMTLRHRKKAGQGALRFV
RQYPFAIQALLCLLSGRTLVVLGADEGRVRRLVAALALFVPGPGKCGERVQAWLSCPFTL
TDLQRWKLIGLQRVASPVGSSMLYSLSRYSRYISILDADQKTLRCPPYRGQLLANIADHR
TYIRRGSTYFLHVQSTLCRLAAKAFLFTFTHHLHLPVSSTEGPEVVEGRRLCFLQEQLGL
GEEDSQILLCLSQLITQQYLQPPTGSSALAPCFSFNYTMSVLYKI
NT seq
2838 nt
NT seq
+upstream
nt +downstream
nt
atgataggctcacctgacgtggtggctttcactaaagaggatgagtttggtccgaccggc
ccggacccctgggctctccctgaggagttctccgtccccctccatcctttggctgactcc
aacccctgggccaaaacctccttcgccaagttcaccaaagacttcatcctcatctcggag
ttctctgagcaggtgggccctcagccgctcctcaccatcccacccgaccccaaagtctgc
ggcacgttcgatctcaactacttctccctgcgcatcatgtcagtggactaccaggcctcc
ttcgtggggcatccaccaggcagtggctacccaaggctcagcttcgtggaggactcgagg
gtggtgttgggcgactcgaaggaaggggcattcgcttacgtccatcacctcacgctgtac
gacctggaggcgaggggctttgtgagaccgttctgcatggcatacgtttcagccgacgag
aggaaaatcatgctgcagtttcaggagctgtccctccgcttcctgcaggcgtctgagtgt
ctgaaggctgggaacaggagagccttcgccaaggaactgcagaggaagctccaggacctg
gagtacactcactctgtgctgcagagagaggagggcctgcagagggaggcggggcctcag
tgcatgtactccgctcacgccgtagagaaagccaatgagctcgccaacgttgaaaagagc
atctacgaacacagggacctgctgaggcagatcagctccttccactgccgcccgcgcaga
gacccgcacgctgtcacctgtcagaagtgtatgacacagtgcttgagcgagtgtgaaacg
ctgttggaaaaatatgccaagcttgccaaccccttctgttacactgacacaggaaggaag
ggggacgaagggcagggtcagatcaatgatgaagcaggcaaagaggaagtggcggaggat
gacgatgagggcgttaaacgcaggccgtcttacacaccacagctgatcaaagctaagtcc
gccaagtgtttcgacaagcgcctgaagaccatgcaggagctgtgtgatgacactttctat
gaggccaccatggggctcctgaaggagacggagaggagtttccgtggcgacctatgttac
cttcacacacgccgcctggacaagtctttacgcaggagacagagaattaccaacttcctg
tttgaggaggaccttggtgatgatgctgaggatgaggggggggtactaagaccattctgt
gctgtgaaccatgctgtcaacaactttacactctcaaatcctcctccaattgtgctggga
ccagaacctctagagctagactcactggcgcccccagatccccgagacccaacttctgag
accagccatactcaggagagtgagctcgggcttgggatgagtcatttggattcctccccc
tcagaccagacccaggagagctccgacgggaccaaaggaagctttagcagcgataagagc
gggatgggcccggcagaaaagcagcaaagtcttgctagtgttaggtctgaacatcctgat
cctgatcctgattctgacttgacccctgaccctgaccacaacactgacctggagagggag
agcagcagtgaagacatggaaaccactgcaggggaggatgagggtgacaacgggggagac
gacacacccgtgtccttgctggaagtggtgtctgagcttgaggccagcagggaggacgac
tgtgagagagtaagtgaaattgagtctgacttgttggttccaattgacacagcatgctgt
atgtctcaagagggtttcctttatgaggcatctgccccagagaagacacctcatctggac
caaagctccaaccatcagtcctctccaaccgcggtggtcaaccaggagcctcaatccctt
ccccttctccaggactattacgctgtgggctctctaagctcagaaaacaaagcatctggg
ctggagctgcccgtggggctccttggagacgcagtttcccgtacgtcagcagaggacggg
tcagactgcaccatgagtgcttctactgggtctgatcgtgctgcctcacctctcggctac
ggggcggtgatgaccctgcgtcacaggaagaaggctggacaaggagccctgaggtttgtt
cgacagtacccctttgccatacaagctcttttgtgcctgctgagtggcagaaccctggtg
gtgcttggggcagatgaggggagggtccgacggttggttgctgctctggccctcttcgtt
cccggccctgggaagtgcggcgagagggttcaagcctggctgtcctgtcctttcaccctt
actgacctgcagaggtggaaactcattggtttgcaaagagtggcgtcccctgttggttcc
agcatgctttactcgctgtcccgctacagccgctatatctccatccttgatgccgaccag
aagaccttgcgctgcccgccgtatcgcggccagctgctggccaacatagccgatcatcgc
acctacatccgccgtggctccacctacttccttcatgtacagagcaccctgtgccgcctg
gctgccaaagccttcctgtttactttcacccaccacctccacctgccggtcagctccacg
gaggggcccgaggtcgtggagggccgacgcctttgctttctgcaggagcagctggggctg
ggcgaggaggacagccagatactgctgtgcctcagccagctcatcactcagcagtacctg
cagccccccaccgggagcagcgcactcgcaccttgttttagttttaactacaccatgagc
gttttatacaaaatctaa
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