Hippoglossus stenolepis (Pacific halibut): 118123505
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Entry
118123505 CDS
T08308
Symbol
pdgfab
Name
(RefSeq) platelet-derived growth factor alpha polypeptide b
KO
K04359
platelet-derived growth factor subunit A
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Pathway
hsp04010
MAPK signaling pathway
hsp04020
Calcium signaling pathway
hsp04510
Focal adhesion
hsp04540
Gap junction
hsp04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
118123505 (pdgfab)
04020 Calcium signaling pathway
118123505 (pdgfab)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
118123505 (pdgfab)
04540 Gap junction
118123505 (pdgfab)
09142 Cell motility
04810 Regulation of actin cytoskeleton
118123505 (pdgfab)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
hsp04052
]
118123505 (pdgfab)
00536 Glycosaminoglycan binding proteins [BR:
hsp00536
]
118123505 (pdgfab)
Cytokines and neuropeptides [BR:
hsp04052
]
Cytokines
Growth factors (RTK binding)
118123505 (pdgfab)
Glycosaminoglycan binding proteins [BR:
hsp00536
]
Heparan sulfate / Heparin
Growth factors/receptors
118123505 (pdgfab)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDGF_N
PDGF
Motif
Other DBs
NCBI-GeneID:
118123505
NCBI-ProteinID:
XP_035036820
LinkDB
All DBs
Position
16:complement(8911821..8931390)
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AA seq
209 aa
AA seq
DB search
MRAALCHLLLWTAYLLLATAEKEVQFPQELIDRLSHSEIHSISDLQRLLDIDSVGTGNDV
IEEPKHHKHHNHHKNFSRHHGHYNDLKSSQLHSRRKRSIVEEAVPAVCKTRTVIYEIPRS
QVDPTSANFLIWPPCVEVKRCTGCCNTSNMRCHPSRKHHRTVKVAKVEYVRRKPKLKEVF
VRLEDHLECVCTSQHHVVEHSEAETVDVR
NT seq
630 nt
NT seq
+upstream
nt +downstream
nt
atgagagccgcactttgccacctcctgctgtggacggcgtacctgctgctggccaccgct
gagaaggaagtgcagtttccccaggagctgatagacagactgtcccacagtgaaatccac
agcatcagcgacctccagcggctactggacattgactccgtaggtacgggaaacgatgtt
atcgaggagcccaagcaccacaagcaccacaaccaccataagaacttctcccgtcaccac
ggtcactacaatgacctgaagagctcccagctccacagccgacgcaagaggagtattgta
gaggaagcggtcccagcggtgtgtaagacgcggacggtgatctacgagatccccaggagc
caggtggatcccacgtctgccaacttcctgatttggccgccctgtgtggaggtgaaacgc
tgcacgggctgctgcaacaccagcaacatgcgctgtcacccttcccgcaagcaccaccgc
acggtcaaggtggccaaggtggagtatgtgaggaggaaacccaagctgaaagaggtcttt
gtgcggttagaagaccacctggagtgtgtgtgcacgtcacaacatcacgtggtggagcac
tcagaagcagaaacagtggacgtgaggtga
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