Hippoglossus stenolepis (Pacific halibut): 118123641
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Entry
118123641 CDS
T08308
Symbol
ints1
Name
(RefSeq) integrator complex subunit 1 isoform X1
KO
K13138
integrator complex subunit 1
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
hsp03041
]
118123641 (ints1)
Spliceosome [BR:
hsp03041
]
Other splicing related proteins
Proteins involved in snRNP biogenesis
Integrator complex
118123641 (ints1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
INTS1_INTS2-bd
INTS1_RP2B-bd
INT1_R3
INTS1_R4
HTH_RNase_II
Motif
Other DBs
NCBI-GeneID:
118123641
NCBI-ProteinID:
XP_035037032
LinkDB
All DBs
Position
16:complement(13145007..13163115)
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AA seq
2204 aa
AA seq
DB search
MNRPKPTTLRRPSAAKPSAHPPPGDFIALGSKSQGAEPKAPAVLLKPASTGLPADRKRET
SSALPSSSGLSSLTKRPKLSTTPPVSALGRLADVAAVDKRAISPSIKEPSVIPIEVSPVV
LLDEIEASESEGNDDRIEGLLCGAVKQLKLNRAKPDITLYLSLMFLAKIKPNVFATEGII
EALCSLLRRDASINFKAKGNSLVSVLACNLLMAAYEEDENWPEIFVKVYIEDSLGERIWV
DSSHCKNFVDNIQTAFGTKMPPKSMLLQVDTGRSGGDLSAGSSPHPSTPDEDDSQTELLI
AEEKLSPEGDWQVMPRYEELAESVEDYVLDVLRDQLNRRQPMDNVSRNLLRLLTATCGYK
EARLMAVQRLEMWLQNPKLTRPAQDLLMSMCMNCNTHGADDMEVISNLIKIRLKPKVLLN
HYMLCVRELLNANKDNLATMVKLVIFNELSNARNPNNMQVLHTVLQHSPEQAPKFLAMVF
QDLLTNKDDYLRASRALLREIIKQTKHEINFQSFCFGLMQERKETSYVDMEFKERFVIQV
TDLLTVSMMLGITAQVKEAGIAWDKGEKKSQSHLDILKSFQNQIASIQRDAVWWLHTVVP
TISKVGAKDYVHCLHKVLFTEQPETYYKWDNWPPESDRNFFLRLCSEVPLLEDTLMRVLV
IGLSRDLPLGPADAMELADHLVKRAAGVQSEAAELADGSKTDLEVLKVERIQLIDAVLNL
CTYHHPENIQLPAGYQPPNLAISMLYWKAWLLLLVVAAFNPQKIGLAAWDGYPTLKMLME
MVMTNNYSYPPCTIADEDTKTEMINRELQMAQREKQDILAFESHLAAASTKQTITESNSL
LLSQLTSLDPQGPPRRPPPQFQEQVKTLNQSLRLGHLLCRSRNPDFLLNIIQRQASSQSM
PWLADLVQSSEGSLDVLPVQCLCEFLLHDAADESLPIEDDEEGESKEQRAKKRQRQQKQR
QLLGRLQDLLLGPKADEQTTCEVLDYFLRRLSSSQVASRVLAMKGLSLVLTEGGLKDGDE
REQPMEEDSADAELLPGYQWLLQDLPKLPLFDSVRGMTSTALQQAIHMETDPQTISAYLI
YLSQHAPVEEQASHNDLALDVARLIVERSTIMNSMFAKHSTRPESNAVLSAFLTIFSAYI
KRMRKTKEGEDLYSWSESQDQVFLRWTTGETATMHILVVHAMVILLTLGPPKGESDFYAL
LDIWFPDKKPLPTAFLVDTSEEALLLPDWLKLRMIRSEVSRLVDAALQDLEPQQLLLFVQ
SFGIPVSSMSKLLQYLDQAVSHDTDTLEQNIMDKHYMAHLVEVQHERGATGGHTFHSLLS
STLPADRDASETSKAKVTVETPHSSVKMRSASQLPAVGPDDDLTGMLLQIFPVKVDPRWH
GPPPSHLSLALQQALAKELMRAKQGQVQQGGLAFRLLQAIAALLTSAHAGPIVMSMHRSH
ALSCPLMRQLHLYQRLVSQDVAFSSLFLKVIVEVLIWLDNPTVEAGPLKTLLRSLASQNS
HKHRHNDVRTGFLHLAEALAYRRDTEVPLRTIIAMLKAGDRCNAEAELIGKVLQGLMEVK
SPYLEELLSLLMTVGTQNGTAGPVAMVISLLLQESEERAVKKEVDSNNSSEVTKSGLSSG
LLVDWLEHLDPEVTSVCPDLQQKLLFTLNKVRGTPAYRPYLLALLTHQSNWCTLLQCISA
LLCKRRDYKLDPSSALDFLWACSHIPRIWQGRDQKIPQKKTEKFVLRLSSEELISMVDLI
LSESELNSRDTQRDDSSSSSSSSVDQASRSLIQSRLPLLHSYCNGDLENIKKVSEYLISC
TKKWEDSSMNKRCQNFLLQIYLHFPEVIQHVTLPEGTLSSGGAADGSSCKLDVLVHRLVT
LLADVGDSKSVENRVSDANLACRKMAVSHPVLLLRHLPMIAGLLHGRIHLNMQEFRQQNH
MAFFSNVLAILELLQPLVFHSDHQRALQNCLLSFMKVLQNFQRTRSPLVFINKFLQFTQK
YITHDAAAAIPYLQKHSNILQNMSAENPDLVQLRSLLAGLTLPVKNSSSEFAADDRDDEV
STGPLPLVNISASVSLSAGDMTMYLKKISRGEAVEDVLEVLTEVDDKSRRSPEIIQYFAN
DLQRLMVSSEELCRNMAFSLALRCIQNNPCLATDFLPTFMYCMGSGNFDVVQTALRNLPE
YVLLCQEHADILLHKAFLVGIYGQIDTSSMIAESMKVLHMEATT
NT seq
6615 nt
NT seq
+upstream
nt +downstream
nt
atgaatcgccccaaaccaacaactctcaggcggcccagtgccgccaaaccatcagctcac
ccacccccgggggatttcatcgccctcggatccaagagccagggggcagagcccaaagcc
cccgctgtcctcctgaagccagcctccacaggtttaccagcggaccgtaagagagagacg
tcctcagcccttccctcctcatcggggctgtccagcctcaccaagcggcccaaactctcc
accacccctccggtcagtgccctgggaagactcgccgatgtagctgcggtggacaagagg
gcgatatccccctcaataaaggagccatcagtgattcccattgaagtatccccagtggtg
ctgctggacgagattgaagcctcagagtctgaaggtaacgatgatcgcattgagggactt
ctgtgtggagcggtgaaacagctcaagttgaaccgagcaaaacctgacatcacgctctac
ctcagtctcatgttcctggccaaaatcaagcccaatgtgtttgcaactgaaggaatcatt
gaggccctctgtagcctcctgcgtcgcgatgcttctatcaacttcaaagcgaaggggaac
agcctggtgtctgttcttgcgtgcaatctgttgatggccgcctacgaggaggatgagaac
tggcctgagatttttgttaaagtttacattgaagactctctgggagaaagaatctgggtg
gacagttctcactgtaagaatttcgtcgacaacatccagactgcttttggcacaaagatg
cctccgaagagtatgctgcttcaggtggacaccggtcgctctggtggagatctcagtgca
ggtagcagcccccacccttcaactcctgatgaggatgacagccagacagaactgctgata
gcagaggagaaactcagccccgagggtgattggcaggtgatgccgaggtatgaagaactg
gcggagagtgtggaggactatgtgctggacgtgctcagggatcagttgaatcgcaggcag
ccgatggacaacgtgtcacggaacctgcttcgtctgcttacagccacatgtggctacaaa
gaggcccgactcatggccgtgcagaggctggagatgtggctccagaacccaaagcttact
cgaccggcccaggacctcctcatgtctatgtgtatgaactgcaacacccacggagcagac
gacatggaggtgatctccaacctgatcaagatccggctcaaacctaaagtcctcctcaac
cactacatgttgtgtgtcagggagctgctgaacgcaaacaaagacaacctggccacgatg
gtgaagctggtgatcttcaatgagctgtccaatgccagaaatcccaacaacatgcaagtt
ctccatacagtgctccagcacagcccagaacaggctccgaagttcttggcgatggtgttc
caggacctgctaaccaataaggatgattacctccgcgcctcccgagctttgctgagagag
atcatcaaacagacaaagcatgagattaacttccagtccttctgcttcggtttaatgcag
gagaggaaggagaccagctatgtggacatggagttcaaagagcgctttgttatccaagtg
acagatttactgactgtctccatgatgctgggcatcactgctcaggtcaaagaagccggc
attgcatgggacaagggcgagaagaagagtcagtctcatctggacatcctcaagtcgttc
cagaatcagattgcttccatacagagagacgctgtgtggtggcttcacactgtggttccc
accatcagcaaagttggtgcgaaagactatgttcattgccttcacaaagtgcttttcaca
gagcaacctgagacttattacaagtgggacaactggcctcctgagagtgacagaaatttc
ttccttcgtctgtgctccgaggtgcctctgttggaggacacactgatgcgcgttctggtg
atcggcttgtcgcgtgatttgcccctgggcccggctgacgccatggagctggcagatcac
ctggttaaaagggctgctggagttcagtctgaagctgcagagttggctgacggttcaaaa
acagatctggaggtcctgaaagtggaaaggatccaactcatcgatgcagtgctgaatctg
tgcacatatcaccatccagagaacattcagctgccagcggggtaccaaccaccaaatctg
gcgatatccatgctctattggaaggcatggctgctgctgcttgtggtggctgcatttaat
ccacagaaaataggtttggctgcttgggacggctatccaacactgaaaatgctcatggag
atggttatgacaaataactacagctaccctccttgcaccattgctgatgaggacacaaag
acagagatgatcaacagggagctgcagatggcccagcgagagaaacaagacattctggcc
tttgagagtcacctggctgcagcgtccaccaagcagaccatcacagagagcaacagtctg
ctgttatctcagctcaccagcctggatccacagggtcctcctcgtcgacctccaccacag
ttccaggagcaagtcaaaaccctcaaccagtccctgcgtctgggacacctcctctgccgc
agccgcaacccagacttcctcctcaacatcatccagagacaggcttcctctcagtccatg
ccctggttggctgatttggttcagtccagtgaggggtccctggatgtgcttccagtgcag
tgcctgtgtgaattccttctgcatgatgctgcagatgaaagtctgccgatagaggacgac
gaagaaggagagagcaaagagcagagggccaagaagagacaaagacaacaaaagcaaagg
cagctgcttggacgactgcaggatcttttgttaggtcctaaggctgatgaacagacaaca
tgtgaagtgttggattatttcctgcgtcgtcttagctcctctcaggtggcatcgagagtc
ctggctatgaagggtttgtctctggtgctgaccgaaggaggcttgaaggatggagatgag
cgggaacaacccatggaggaagattctgcagatgccgagctcttgccgggttaccagtgg
ctgctgcaggacctcccaaaactcccgttgttcgacagcgtgaggggcatgacgtccact
gctctgcagcaggccattcacatggagaccgacccacagacgatcagtgcctatctcatc
tacctttcccagcatgcaccagtggaggagcaggcctctcataatgaccttgcactggat
gttgcgcggctgattgtcgaacgttccaccatcatgaacagcatgttcgccaaacattcc
accaggcctgagtccaatgctgtgctctctgctttcctcaccatcttctctgcttacatt
aagaggatgaggaagacgaaagagggcgaggatctttacagctggtcagaatctcaggac
caggtgtttttgcgttggaccacaggggaaactgcaaccatgcacatccttgtagtccat
gctatggtcatcctgctgactctggggccccctaaaggagagagcgatttctatgctctt
ttggacatttggttccctgacaagaaacctctacccactgccttcctggttgacacgtca
gaagaggcccttctgctgcctgattggttgaaactcaggatgatccgatcagaggtctct
cgattggttgacgcagctctgcaggacctggagcctcagcagctgctgctgtttgttcag
tcattcggcattcctgtgtccagcatgagtaaactgctgcagtacctggatcaggctgtt
tcccatgacacagatacacttgagcagaacatcatggacaagcactacatggcccacctg
gttgaggtgcaacatgagcgaggtgccactggggggcacactttccattcattactgagc
tccactcttcctgctgacagagatgcttctgaaacaagtaaggctaaagttaccgtggag
acgccccacagctctgtgaagatgagatcagccagtcagcttcctgcagtcgggcctgac
gatgatctcaccggcatgttgcttcagatattccccgtaaaggtggaccctcgctggcat
ggcccgcctcctagccatctctctctggccctgcagcaagccctggctaaagaactgatg
cgggccaaacaaggccaggttcagcagggtgggttggcatttcgcctcctacaggccatc
gctgccctgctcacctctgcccacgcaggccccattgtcatgtccatgcaccgtagccac
gccctctcctgtcctctcatgcgccaactgcacctctatcagcgtctcgtgtcccaggac
gttgctttttcctcactcttcctcaaggtcatcgttgaggtgttgatctggttagacaac
ccaactgtggaggcaggtcctctgaagactctgctcagatccctcgccagtcagaactct
cacaaacacaggcataatgatgtgcggacaggtttcctccacctggctgaggctttggca
tatcgcagagacactgaggtcccactgaggaccatcatcgcaatgctgaaggctggagac
agatgtaatgcagaagcagagctcattggcaaagtgttacaggggctgatggaggtgaag
tcgccgtatttagaggagcttctgtctctgctgatgactgtgggcacacagaacgggacc
gctggcccggttgcaatggtgatttccctgctgctccaagaaagtgaggagcgagccgtg
aaaaaggaagtggattctaacaacagctccgaggtgaccaagtcaggactgagctccggg
ctgctcgttgattggttggagcatctcgacccagaggtcacgtcggtgtgtccggacctt
caacagaaactgctgttcaccctcaacaaagtacgaggcacccctgcgtacagaccctat
cttctggccttgctcacacatcagtcaaactggtgcaccctgctgcagtgtatcagtgct
cttctctgcaagcgacgagactacaaattggacccatcatcagcccttgatttcctgtgg
gcgtgcagccacatcccccgtatctggcaaggacgtgaccagaagatccctcaaaagaaa
acggagaagttcgtgctgcgactcagttcagaggagctcatcagcatggtggacctgatc
ttgtctgagtcggagctcaacagtcgcgacacacaacgtgacgacagcagcagcagcagc
agcagcagcgtggaccaggcctcccgctccctcatccagtcccggctgcccctccttcac
tcctactgcaacggagatctggaaaacatcaagaaggtgtcggagtacctcatcagctgt
acaaagaaatgggaggacagttcgatgaacaagaggtgccagaactttctgctgcagatc
tacctgcactttcccgaggtcatccagcacgtcaccctgcccgagggcaccctcagcagc
ggaggggctgcggatggcagcagctgcaagctcgatgtcctggtccatcgtctggtcacc
ctgctcgccgacgttggcgactcaaagtctgtcgaaaaccgcgtgtctgacgccaacctc
gcctgtcgtaagatggccgtgtcgcaccctgtccttttgctgagacacctgcccatgatc
gcagggctgctccacggccgcattcacctgaacatgcaggagtttcgccagcagaaccac
atggccttcttcagcaacgtgctcgccatcctggagctgctgcagccgctggtgttccac
agcgaccaccagagggcgcttcaaaactgccttctctccttcatgaaggtccttcagaac
tttcagaggactcgttctccgttggtcttcatcaacaaattcctgcagttcacgcagaag
tacataacgcacgatgcagcggccgccattccttatctacagaagcactccaacatatta
cagaatatgtctgcagaaaacccagacctggtccagctgaggtctctgctggctggactc
actctgccggtgaaaaactcctcttcagagttcgcggcagacgacagagatgatgaagtg
tccactggtccccttcccctcgtcaacatatctgcctcggtctcgctgagcgcgggggac
atgaccatgtacctgaaaaagatttcaagaggagaagcagtcgaggatgtgttggaagtg
ttgacagaggtggatgataagtcgaggaggagcccagagatcatccaatacttcgccaac
gatctgcagagactcatggtttcctctgaggagctgtgtcggaacatggccttcagtctg
gccctgcgctgcattcagaacaatccctgcctggcaacagacttcctgccgactttcatg
tactgtatgggcagtggtaacttcgacgtggtacagaccgctctcaggaaccttccagaa
tacgtgcttctctgtcaggaacacgcagacatcttgctccacaaggcgtttttagtgggc
atctacggacaaattgacaccagctcaatgatcgccgagtcgatgaaagtccttcacatg
gaggcgaccacatag
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integrated database retrieval system
