Hippoglossus stenolepis (Pacific halibut): 118124559
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Entry
118124559 CDS
T08308
Name
(RefSeq) exostosin-1c
KO
K02366
glucuronyl/N-acetylglucosaminyl transferase EXT1 [EC:
2.4.1.224
2.4.1.225
]
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Pathway
hsp00534
Glycosaminoglycan biosynthesis - heparan sulfate / heparin
hsp01100
Metabolic pathways
Module
hsp_M00059
Glycosaminoglycan biosynthesis, heparan sulfate backbone
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin
118124559
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
hsp01003
]
118124559
Enzymes [BR:
hsp01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.224 glucuronosyl-N-acetylglucosaminyl-proteoglycan 4-alpha-N-acetylglucosaminyltransferase
118124559
2.4.1.225 N-acetylglucosaminyl-proteoglycan 4-beta-glucuronosyltransferase
118124559
Glycosyltransferases [BR:
hsp01003
]
Glycan extension
O-Glycan
118124559
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_transf_64
Exostosin_GT47
RXYLT1_C
Motif
Other DBs
NCBI-GeneID:
118124559
NCBI-ProteinID:
XP_035038422
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Position
17:complement(5368511..5445659)
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AA seq
740 aa
AA seq
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MQARKKYVLLGLCACCWLVLFYWGGGVQLRLLRLLTRQRGEVVRPWPNWTDRAFLPRYAH
LDELQTDPGTAESPRQRRQAWSAVYKDSRCRMETCFDFSRCRRRGREGFRVYIYPSEKND
HVSESYRKILTSIGESRYYTSDPREACLFVLGIDTLDRDQLSGQFVPNLDERIRGFPLWN
DGRNHLIFNLYSGTWPNYTEDLGFNIGQAMLAKASLNTEHFRPGFDISIPLFSKDHPQKG
GERGWLVRNTIPPRRKYLLMFKGKRYLTGIGSDTRNALHHIHNGKDIVSLTTCRHGKDWE
KHKDSRCDHDNLEYERFDYQELLHNSTFCLVPRGRRLGSFRFLESLQAACIPVLLSNGWE
LPFSDIIQWNQAVIEGDERLLLQVPSTVRAVGNERVLALRQRTQMLWEAYFSSVDKIVLT
TLEIIKDRVFSHISRNKYMWNSLPGGLLVLPEYSTHLAHFPFYYLGLGISPGHEFTAVIH
AVSPLVSQSQPIMKLLQVVSKSKYCSQIIILWNSEKPPPSRSKWPPMPVPLTVTDGRRKI
TSRFLPHVAIETEAVLSLDEDTVLLTSEVNFAFLVWRSFPERIVGYPPRSHFWDPLKRAW
GYTSKWTNDYSIVLTGAAFYHRYYHHLFTHYLPQSLRTLVDRTSNCEDILMNFLVSAVTH
LPPIKVAQRKQYKELPSPQGTKSVPWANPEHFNQRQECVNTFANWFGYMPLVHSQFRLDP
VLFKDQVSVLRKKYKDLERA
NT seq
2223 nt
NT seq
+upstream
nt +downstream
nt
atgcaggcgcgtaagaagtatgtcctgctgggcttgtgtgcgtgctgctggctggtcctc
ttttactggggtggaggcgtccagctgcgtctgctgcggctgctgacacgccagcggggt
gaggtggtgcgcccctggcccaactggaccgaccgggccttcctgccccgctatgcccac
ctggacgagctccagacggaccctgggacggcggagtcgccccgacagcggcggcaggca
tggtccgccgtttacaaggacagccgctgccgcatggaaacctgtttcgacttctctcgg
tgtcgtcgcagaggcagagaaggattcagggtgtatatatatccatcagagaaaaatgat
catgtgtcagaaagctacaggaagatcctgacgtcaataggagagtcgcggtactacacg
tctgacccccgcgaggcctgtctgttcgtgctcgggatagacaccttggatcgggaccag
ctatcaggacagtttgtgcccaacctggacgagcgtattcgtggtttcccgttgtggaat
gacgggaggaaccacctgatcttcaacctgtactcaggcacgtggcccaactacacagag
gacctgggctttaacatcggccaggccatgttagccaaagccagcctcaacacagaacac
ttcaggccaggctttgacatttccatcccgctgttctccaaggaccacccgcagaagggg
ggagagcgggggtggctggtgaggaacaccatcccgccgcgaaggaagtacctgctgatg
ttcaaagggaagcgttacctgacgggcatcggctccgacacccgaaatgcactccaccac
atccacaatgggaaggacattgtgtcgttgacgacgtgccgccacgggaaggattgggag
aagcacaaggactcccgctgtgatcacgacaacttggagtacgagaggtttgactaccag
gagctcctccacaactccaccttctgtctggtgcctcgaggtcgacgcctgggctccttc
cgcttcctggagtcactacaggcggcgtgtatccccgtgctgctgagtaacggttgggag
ctgccgttttcagacatcatacagtggaaccaggcggtcatagagggggacgagagatta
ctgctgcaggtgccgtccacagtgagagcggttgggaacgagcgggtcctggccctccgg
cagaggacgcagatgctgtgggaggcctacttttcctccgtggacaagatcgtcctcacc
acgctggagatcattaaggaccgcgtgttctcccacatatcgaggaataagtacatgtgg
aactcgctgccggggggtctgctcgtcctgcccgagtactccactcacctcgctcacttc
cccttctactacctgggattagggatcagtccaggtcacgagttcactgctgtcatacat
gctgtctccccattggtctcccagtctcagccaatcatgaagctgcttcaggtggtctcc
aagtcaaagtactgctcgcagatcatcattctctggaacagcgagaagccgccgccgagt
cggagcaaatggcctcccatgccggtccctctcactgtgacagacggcaggaggaagatc
accagtcggttcctacctcacgttgccatagagacagaggcagtgctgagtctggacgag
gatacggtcctgctgaccagcgaggtgaactttgccttcttggtttggcggagtttcccc
gagcggatcgtgggctaccctcccaggagccacttctgggaccccctgaagcgcgcctgg
ggctacacctctaagtggaccaacgactactccatcgtcctgaccggagccgccttctac
cacaggtactaccaccatctgttcacccactacctgccccagtctctgcggacgctggtg
gatcgcacgtccaactgtgaggacatcctgatgaacttcctggtctctgctgtaactcac
ctgccaccgatcaaagtggctcaaaggaagcagtacaaagagttgccaagcccacagggt
acaaagagcgtcccctgggccaatccggagcacttcaaccagcggcaggagtgcgtcaac
accttcgccaactggtttggctacatgcctctggttcactctcagtttcgcttggacccc
gtgctcttcaaagatcaagtgtctgtccttcgcaagaaatacaaagacctggagagggcg
tga
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