Hippoglossus stenolepis (Pacific halibut): 118125828
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Entry
118125828 CDS
T08308
Symbol
tnfrsfa
Name
(RefSeq) tumor necrosis factor receptor superfamily, member a
KO
K04722
tumor necrosis factor receptor superfamily member 10A/B
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Pathway
hsp04060
Cytokine-cytokine receptor interaction
hsp04115
p53 signaling pathway
hsp04210
Apoptosis
hsp04217
Necroptosis
hsp05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
118125828 (tnfrsfa)
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
118125828 (tnfrsfa)
04217 Necroptosis
118125828 (tnfrsfa)
04115 p53 signaling pathway
118125828 (tnfrsfa)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
118125828 (tnfrsfa)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04050 Cytokine receptors [BR:
hsp04050
]
118125828 (tnfrsfa)
04090 CD molecules [BR:
hsp04090
]
118125828 (tnfrsfa)
Cytokine receptors [BR:
hsp04050
]
Tumor necrosis factor receptors
TNF receptor superfamily
118125828 (tnfrsfa)
CD molecules [BR:
hsp04090
]
Proteins
118125828 (tnfrsfa)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TNFR_c6
Death
bCoV_NS7B
DUF6471
Peptidase_M56
Motif
Other DBs
NCBI-GeneID:
118125828
NCBI-ProteinID:
XP_035040741
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All DBs
Position
18:complement(16169143..16193829)
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AA seq
450 aa
AA seq
DB search
MNLDPVLGKLSVLVTALLSAGLVCHSADLPASQWSGEEYRNLTLRQHRTCVENEQYHHQT
LCCLNCHAGTYVQKACERDQEQGTCLPCEHGQTYTEHSNGMNRCLPCTHCRLDQTVTASC
TTTTDTKCQCKQGTFCVPEQACEVCKRCVKCKPGEEEVRKCTPFSNTGCRKRDPSPTRTS
TALPSPTPSTTAETVVPLISYIFLAIILILLIGLAVWWFVIKQRSCELPCTKSHCESSEI
VKIPIDESGATAEERQNNQNAGLEGEESRPESRPLLQETQVGITKSSPPEDEDRGLGDSL
PNTTSSSQTSLSALPTAASSGSTPHQSPLAFRLPPADMDDPLRHQLVPLQGSEKSLRKSF
DLFDEHLDVGIHNKFFRSIGVSDNSIRIAENSPPGDKVYELLKIWMQRQGLKADINDLLD
ALLTMGQRRSAESIANMALQRGYYKHADTP
NT seq
1353 nt
NT seq
+upstream
nt +downstream
nt
atgaacttggatccggtgctcgggaaactttctgtgttggtgacagcgctcctcagtgct
gggctggtgtgtcactcagcggaccttccggcatcgcagtggtccggcgaagaatacaga
aacctcacgctgcgacaacacagaacctgcgtggagaacgagcagtaccaccaccagaca
ctctgctgcctcaactgccatgcaggaacctatgtgcagaaggcctgtgagagagatcaa
gagcaagggacgtgtcttccctgtgagcacggacagacgtacacggagcactccaacggg
atgaaccgctgtctgccgtgcacccactgccgtttagatcagactgtaacggcgtcgtgc
acaacaacaacagacaccaagtgccagtgcaaacaggggaccttctgtgtgccagagcag
gcctgtgaagtctgcaaacgttgtgtcaagtgtaaaccaggggaggaggaggtgaggaag
tgcacccccttttcgaacacagggtgtcgaaaacgggatccgtccccaaccagaacctcc
acagcccttccctctccgaccccttccaccacagccgaaacagtggttcctttaatatct
tatattttcttggccatcatcctgatattgttgattggactggctgtgtggtggttcgtg
atcaagcaacgttcatgtgaattaccatgcacaaagagccattgtgaatccagtgaaatt
gtgaagattcccattgacgagagtggagccacagcagaggagcggcagaataatcagaat
gcaggtctggagggtgaggagtcccgtccggagtctcggcccctgctgcaggagacccag
gtcgggataaccaagtcgtctccgccggaggacgaggaccggggactaggggacagcctc
cctaacacaaccagctcgtctcaaaccagcctgtccgccctgcccacagcggcttcctct
ggcagcactccacaccagagcccccttgccttcagactgccccctgcagacatggacgat
cctctgcgacatcaactagtgccactacaagggtcagaaaaatccctgaggaagagcttt
gatttgtttgacgagcacctggacgtggggatccacaacaagttcttccgatcgatcgga
gtcagcgacaacagcattcggatcgcggaaaacagcccccccggggacaaagtttatgaa
ctactgaagatctggatgcagaggcagggactcaaagccgacatcaacgacctgctagac
gctctgctaaccatgggccagcggcgctcggcagagagcatcgccaacatggcgctgcag
agaggctactataagcacgcagacacgccctga
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