Hippoglossus stenolepis (Pacific halibut): 124851373
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Entry
124851373 CDS
T08308
Name
(RefSeq) H-2 class II histocompatibility antigen, E-S beta chain-like
KO
K06752
MHC class II antigen
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Pathway
hsp04145
Phagosome
hsp04514
Cell adhesion molecules
hsp04672
Intestinal immune network for IgA production
hsp05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
124851373
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
124851373
09150 Organismal Systems
09151 Immune system
04672 Intestinal immune network for IgA production
124851373
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
124851373
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
hsp04147
]
124851373
Exosome [BR:
hsp04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
124851373
Exosomal proteins of epithelial cells
124851373
Exosomal proteins of breast milk
124851373
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Paralog
Gene cluster
GFIT
Motif
Pfam:
C1-set
MHC_II_beta
C2-set_2
Ig_3
C2-set_3
Motif
Other DBs
NCBI-GeneID:
124851373
NCBI-ProteinID:
XP_047194929
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All DBs
Position
23:complement(157612..165258)
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AA seq
308 aa
AA seq
DB search
MIVQISCSSVEKVSLHIISPPHLSKSSAESNPLSHHQGLTPSIQDTQKTSSTLVFLVTEE
HGFILPQVLLFFITVCAADGFLNYRVANCEFNSTELNDIEYIESYYYNKLEFITFRSSVG
KFVGINAHGEKNAERWNKGPEVVRARAAKATYCLHNVGIFTESALTKSVKPSIRLHSVAP
PAGKHPAMLVCSVYDFYPKLIRVSWQRDGQEVTHEVTSTDELADGDWFYQIHSHLEYTPR
SGEKISCVVEHASLSKPLITDWDPSMPESERNKIAIGTSGLILGLTLSLAGFIYYKRKAQ
GRILVPTN
NT seq
927 nt
NT seq
+upstream
nt +downstream
nt
atgattgttcagatcagctgctcctctgtggagaaggtcagcctccacatcatctctcct
ccacacctgagcaagagctcagcggagtcaaaccccctctcacatcatcagggtctcact
ccctccattcaggacactcagaagacttcctccacacttgtcttcctggtaacagaggaa
catggcttcattcttcctcaggttctcctcttcttcatcactgtctgcgcagcagatgga
ttcctgaattatagggtagctaattgtgagtttaactccactgagctgaacgacattgag
tacatcgagtcttactattacaacaaactggagttcatcacgttcaggagcagcgtgggg
aagtttgtcggaatcaatgcgcatggagagaagaacgctgagagatggaacaagggtcca
gaggtggtcagggcgagagctgcgaaggcgacttactgcttacacaacgttggaatcttc
acagaaagtgctctgacgaagtcagtcaaaccctccatcagacttcactctgtggcgcca
ccagctggcaaacatccggccatgttggtctgcagcgtctacgacttctaccccaaactg
atcagagtgagctggcaaagagacggacaggaagtcacccatgaggtcacttccactgat
gagctggcagacggtgattggttctaccagatccactcccacctggagtacacgcccagg
tctggagagaagatttcctgtgtggtggaacacgccagcctgagtaaacctctgatcact
gactgggatccatccatgcctgagtcagaaagaaacaagatcgccatcggaacctcagga
ctgatcctgggtctgaccttatctctggctggattcatctactacaagaggaaggcccaa
gggcgaatcctggttcccactaactga
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