Hyla sarda (Sardinian treefrog): 130283229
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Entry
130283229 CDS
T11475
Symbol
PTPRF
Name
(RefSeq) receptor-type tyrosine-protein phosphatase F
KO
K05695
receptor-type tyrosine-protein phosphatase F [EC:
3.1.3.48
]
Organism
hsq Hyla sarda (Sardinian treefrog)
Pathway
hsq04514
Cell adhesion molecule (CAM) interaction
hsq04517
IgSF CAM signaling
hsq04520
Adherens junction
hsq04910
Insulin signaling pathway
Brite
KEGG Orthology (KO) [BR:
hsq00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
130283229 (PTPRF)
04517 IgSF CAM signaling
130283229 (PTPRF)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
130283229 (PTPRF)
09150 Organismal Systems
09152 Endocrine system
04910 Insulin signaling pathway
130283229 (PTPRF)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
hsq01009
]
130283229 (PTPRF)
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
hsq04515
]
130283229 (PTPRF)
Enzymes [BR:
hsq01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.48 protein-tyrosine-phosphatase
130283229 (PTPRF)
Protein phosphatases and associated proteins [BR:
hsq01009
]
Protein tyrosine phosphatases (PTPs)
Class I PTPs (Classical)
Receptor PTPs
130283229 (PTPRF)
Cell adhesion molecules [BR:
hsq04515
]
Immunoglobulin superfamily
Type II RPTP family
130283229 (PTPRF)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Y_phosphatase
fn3
I-set
Ig_3
FN3_DSCAM-DSCAML_C
Pur_ac_phosph_N
Ig_2
Fn3_VIN3
Fn3_ROS1
Fn3_PBP1
ig
Interfer-bind
Tc-R-P
PTP-SAK
V-set
DSPc
Fn3_R-PTP-O
Fn3_PTPRU
C2-set_2
Y_phosphatase3
PTPlike_phytase
PTP-NADK
YxzE
Insulin_TMD
EphA2_TM
DUF3377
Motif
Other DBs
NCBI-GeneID:
130283229
NCBI-ProteinID:
XP_056388411
LinkDB
All DBs
Position
7:231938511..232077670
Genome browser
AA seq
1928 aa
AA seq
DB search
MDSALYNIWHLYGTSYATQKTPPPYSIQEGEDATVLGEPVFIRKPDDQIGISGGVASFVC
QATGDPKPRITWMKKGKKVSSQRFEVIEFDDGSGSVLRIQPLRVHRDEAIYECTATNSVG
EINSNAKLTVLEEEQLPHGFPVIDMGPQLKVVERTRVATMLCAASGNPDPEISWYKDFLP
VDTATSNGRIKQLRSGGTPIRGALHIENSEESDQGKYECVATNSAGTRYSAPANLYVRVR
RVPPRFSIPPSSHEVMPGGSVNLTCVAVGAPMPYVKWMAGVDELTKEDEMPVGRNVLELT
NIRESANYTCVAISSLGMIESVAQITVKALPKPPVAVTVTESTATSVTLTWDSGNPEPLS
YYVIQYKPKAFEGSFQEVDGVATTRYSIGGLSPYSEYEFRVIAVNNIGRGPPSEVVEAQT
GEQAPSGPPLRVQARMLSASTMIVQWDPPEEANGQIRGFRVYYTSDPHLSFSMWQKHSVE
DNLLTTIAGLTTGITYSIRVLAFTSVGDGPPSEMVQVKTQQGVPAQPTNFQAEAESDTRI
MLTWRYIQQERIVSYELLYWEGQDGPQQKITFAPSSFYAVEGLKPDTLYNFQLAASSSMG
LGVYTPVIQARTAQSTPSAPPQDVECASLSSTSIRVSWVAPPVSSRNGALTRYSLAYQAV
AGEDTSRHVVDSIPPDVSSWEIKDLEKWTEYRVWARAHTDVGAGPESPPVIVRTDEDVPS
APPRKVEVDSANSTSVRVTWKSPLPTKQNGQIRGYQVTYVRLEGGEPRGNPVIKDVMLAE
AQWRPEESADYEALITGLSPETTYSITVAAYTTKGDGARSKPKVVTTTGALPGKPSIGIS
TTTQNTALIQWHPPRESMGELLGYRLQYKRVDEERFITMDFGKNEHHYTLTKLHKGATYI
FKLSAKNRAGFGEEVEKEISTPEDVPSGFPQNLQVVGLTTSTTELSWDPPVLSERNGKIT
NYTVVYRDINSPQDMVNVTRDTHITLINLKPDTTYDIKVRARTNKGLGPLSPSIQSRTMP
VDQVFAKNFRVNAVMKTSVLLSWEVPDSYKSAVPFKILYNNQNVEVDGHSMRKLINNLQP
DTDYSFVLMHRGSSAGGLQHRVSIRTAPDVLQSKPSFTSKYMEDRKFTILLPRVQTSSPV
RWYYIVVVPLDSTRSSLSQRQSPEDMELEQILEAINQGSRRQKRQASRNKPYIAARLNTL
PESFTIGDNKEYNGFLNKPLDPHLSYTCFVLAALEDGDTKKYAASPYSDDIVVEEVVSTR
QQEEPEMLWVMGPVLAVILIIIIVIAILLFKSKQERKRTNSPSNKEDQTPGVKESLLGNS
SDPVELRRLNYQTPGSSVPSYPSISSMREHPPISINDLSEHIDRLKANDGLKFSQEYESI
DPGQQFTWENSNLEVNKPKNRYANVIAYDHSRVILTSVDGVPGSDYINSNYIDGYRKQNA
YIATQGPLPETLSDFWRMVWEQRTTTIVMMTRLEEKSRVKCDQYWPSRGTETYGMIQVTL
LDTVELATYTVRTFALYKNGSCEKREIRQFQFMAWPDHGVPEYPTPILAFLRRVKACNPP
DAGPMVVHCSAGVGRTGCFIVIDAMLERVKLEKTVDIYGHVTCMRSQRNYMVQTEDQYIF
IHEALLEAVMCGNTEVPARSLYAHIQKLSQVPPGESVTSMELEFKLLANSKAHTSRFISA
NLPCNKFKNRLVNIMPYEISRVCLQPIRGVEGSDYINASFIDGYRQQKGYIATQGPLAET
TEDFWRMLWEHNSTIVVMLTKLREMGREKCHQYWPAERSARYQYFVVDPMAEYNMPQYIL
REFKVTDARDGQSRTIRQFQFTDWPEQGVPKTGEGFIDFIGQVHKTKEQFGQDGPITVHC
SAGVGRTGVFITLSIVLERMRYEGVVDMFQTVKTLRTQRPAMVQTEDQYQLCYRAALEYL
GSFDHYAT
NT seq
5787 nt
NT seq
+upstream
nt +downstream
nt
atggactcagcattgtacaacatatggcatctatatggcacctcttatgccacacaaaag
actccacccccttactccatccaggagggagaagatgccaccgttttgggtgagccggtc
tttattcggaagccggatgaccagattgggatatcaggtggtgtcgcctccttcgtctgc
caggccaccggggatccaaagccaagaatcacctggatgaagaaggggaaaaaagtcagc
tcccagcgcttcgaggttatagagtttgacgacggatcggggtctgttctccgaatacag
cccctccgggttcacagggacgaagcgatatacgagtgcacggcgaccaacagcgtggga
gaaatcaacagcaacgccaaactgactgttctagaagaggagcagctgcctcatgggttc
cccgtcattgacatgggaccgcaactcaaggtggtggagaggacacgggtagccaccatg
ctatgtgccgccagcggaaacccagatccggagatctcctggtataaggacttccttccc
gtcgacacggccaccagtaatggaaggattaagcagctccgctcaggtggtacaccgatc
agaggagcactgcatattgaaaacagcgaggaatctgaccaggggaagtacgaatgtgtc
gctaccaacagtgccggaacacgctactccgctcctgctaatctctacgtgcgtgtccgg
cgggtgcctccgcggttttctattcctcccagtagccatgaagtcatgccaggaggcagc
gtgaacttaacctgtgtcgcagtcggtgcgcccatgccttatgtaaagtggatggccggt
gtagatgaacttaccaaagaggacgaaatgcccgttggacgtaatgttcttgagctgacc
aatattcgtgaatctgccaactacacttgtgtggctatttcctctctggggatgattgaa
tctgttgcacagattactgtgaaagcattgccaaagccgccagtagctgtaacggtaaca
gagtcgacagccactagtgtcacattgacgtgggattctgggaacccggagccactttcc
tattatgttatccagtataaacccaaagcatttgaagggtctttccaggaagttgatggt
gtcgctacaactcgctacagtattggtgggctcagcccttactctgaatatgagtttcgt
gtcattgcggttaacaacattggccgtggacctccaagtgaagtggtagaagctcagaca
ggagaacaggctccctcaggtcctcctttgagagtccaggcccgcatgctcagtgcaagt
actatgatagttcaatgggatcctcccgaagaagccaatggacaaataagaggattccga
gtatactacacttcagatccacatttatcttttagcatgtggcaaaagcacagtgtggag
gacaatcttttgactactattgcaggattaaccactgggatcacatacagtatccgtgtg
ctggcattcacatcagtgggtgatgggccaccttcagagatggtccaagtcaagacacag
cagggagttccagcacagccaactaacttccaggcagaagctgaatctgacacaagaatt
atgctgacctggcgctatatacagcaagaacgcatcgtctcgtatgaacttctgtattgg
gaaggtcaggatgggccacaacaaaaaataacatttgccccatcatcattttacgctgtt
gaggggctgaagccggacacactgtataatttccagctggcggccagctcttctatgggg
cttggggtttacacaccagtgatccaggctaggacagcgcagtccacaccatctgcccca
ccgcaggatgtggagtgtgccagccttagctccacctctatccgggtaagttgggtagct
ccaccagtctccagccgcaatggagctttaacccgctactctttggcctatcaagcggtg
gccggggaggacacatcccgacatgttgtggacagtatcccaccagacgtctccagctgg
gagatcaaggacctggagaaatggacagagtacagagtttgggcgcgagctcatacagat
gtaggggctgggcctgagagccccccagtcattgtgcggacagatgaggatgtgcccagt
gcaccaccaaggaaggttgaagtcgattcggcaaattccacatctgtacgagtgacctgg
aagtctccacttcctaccaagcaaaatggtcagatacgtggctaccaggtgacttatgtg
cgcttggaagggggagagcctcgaggaaaccctgttattaaggacgtcatgttggcagaa
gctcagtggagaccagaggagtctgcagattacgaagccctgataactgggctatctcca
gaaaccacctactccatcactgttgcggcatacactactaaaggagatggtgcaaggagc
aaacccaaagtcgtcaccacaacaggagcattgcccgggaagccgagcatagggattagc
acaaccactcaaaacactgcgctgattcagtggcatccaccaagagaatcgatgggagag
cttctgggctaccgcttgcagtataaacgtgtggatgaggagagatttatcactatggac
tttggaaagaatgaacatcactacacgttgaccaaactacacaagggtgccacctacatc
ttcaaactgtctgccaagaaccgggctggtttcggtgaggaggttgagaaggagatctct
actcctgaggatgtacctagtggctttccacaaaacttgcaagttgtgggattgaccacc
tccacaacagaactgtcttgggaccctccagtactgtcagaacgcaacggaaagatcaca
aactatacagtggtttaccgggacatcaatagtccccaagatatggtcaatgtcacgcga
gacactcacattacactcatcaacctcaaacccgatactacatatgatatcaaagtcagg
gcaaggacaaataaggggcttgggcctctaagtcccagcatacagtcccgcaccatgccg
gtggatcaagtatttgctaagaacttcagagtgaatgctgtgatgaagacctcagtcttg
ctgagctgggaagttcctgactcttacaaatcagctgtgcctttcaagattctatataac
aaccagaacgtagaagtagacggtcattccatgcgcaagctgatcaacaaccttcagcca
gatacagactattcctttgtactcatgcaccgaggcagcagtgctggcggcctgcaacac
cgagtttccatccgtacagcccccgatgtcctgcagagcaaaccctcatttaccagcaag
tatatggaggacagaaagtttactattctcttgccacgagtacaaacttcttctccagtg
agatggtattacattgtggttgttccacttgatagtaccaggagtagcctcagccaacgg
caaagccctgaggatatggagctggaacagatcctggaagccattaatcaagggtctcgt
cggcaaaaaagacaagcaagcaggaacaagccatacatagcagcccggctgaacacgctc
ccagaatcgtttactattggtgacaataaagaatataatggattcctgaacaagcctctg
gaccctcatctgagctacacctgctttgtgctcgctgctctagaagatggggacacaaag
aagtatgctgccagtccatactcggatgacattgtggtggaagaagtagtttcaaccagg
caacaagaggaacccgaaatgctttgggtcatgggcccagtccttgccgtcattcttatc
atcatcattgttattgctattctgttgtttaaaagtaagcaggagaggaaaagaaccaat
tccccatctaataaggaggatcagacaccgggtgtcaaggaatccctcttgggaaattca
tctgatcctgtggaactgcggcgcctgaactaccaaactccaggttccagtgtccccagt
tatccgagtatctcaagtatgagagaacatccacccatctcgatcaatgacctctctgaa
cacattgaccgtctgaaggccaacgacggactgaagttctcccaggagtacgagtccatt
gaccccgggcagcagtttacatgggagaattctaacctggaggtgaacaaaccaaagaat
cgttatgcaaatgtcattgcctacgaccactcgcgtgttatccttacctcagtggatggt
gtccctggcagcgattatatcaactccaactacatagatggctacaggaagcagaatgct
tacatcgctacacaagggccgctacctgagactctcagtgacttctggcgtatggtgtgg
gagcagaggacaaccaccattgtcatgatgactcgcctagaggaaaaatccagggtgaag
tgcgatcagtactggccgagccgtggcaccgagacgtacggtatgatacaagtcacccta
ttagacacagtagaacttgccacgtatacagtgaggacgttcgctctctataagaacggc
tcctgtgaaaaacgagaaatccggcagttccagttcatggcgtggccggaccacggggtc
ccagagtaccccacacctattctggccttcttacgaagagtaaaagcttgcaacccccca
gatgctggccctatggttgttcactgcagcgccggtgtgggaagaacgggatgttttata
gtcatcgatgcaatgttagagagagtaaagcttgagaagactgtagacatctacggtcac
gtgacctgcatgcgctctcagcggaattacatggtgcagacagaggaccagtatatcttc
atccatgaggctttactagaagcagtgatgtgcggaaacacggaagtgccggcacgcagc
ctgtatgcacacatccagaaactgtctcaggtccctccaggggaaagcgtcacctccatg
gagctggagttcaagctcttggccaactctaaggctcacacctcccgattcatcagtgcc
aacttaccatgcaacaagttcaagaatcggctggtgaatataatgccgtacgagataagc
cgtgtgtgtcttcagcccatacgtggagtggaggggtcagactatataaacgccagcttc
atcgatggctacaggcaacagaaagggtacatcgctactcagggacccctggcagagacc
actgaggatttctggcgcatgctatgggagcataattctaccattgtggtgatgctgaca
aagctgcgggagatgggccgggagaagtgtcatcagtactggccagcagaacgctccgca
cgctaccagtattttgtggtggatcccatggctgaatacaacatgcctcagtacatcctg
cgcgagtttaaagtgacagatgcaagggatggacagtctcggacaatcagacaattccag
ttcacggattggccagagcaaggagttccaaaaacgggagaaggcttcatcgacttcatc
ggacaagtgcataagaccaaggaacagtttggacaggatggaccgataactgttcactgc
agcgccggcgtggggcggaccggagtcttcattacactcagcattgtcctggagcggatg
aggtacgagggagtggtggacatgttccagactgtgaagactctaagaacacagcgaccg
gccatggtacagacagaggaccagtatcagctgtgctacagagccgcgttggagtaccta
ggcagctttgaccactatgcaacataa
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integrated database retrieval system
