Hyla sarda (Sardinian treefrog): 130285117
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Entry
130285117 CDS
T11475
Symbol
RAPGEF4
Name
(RefSeq) rap guanine nucleotide exchange factor 4 isoform X1
KO
K04351
Rap guanine nucleotide exchange factor 4
Organism
hsq Hyla sarda (Sardinian treefrog)
Pathway
hsq04081
Hormone signaling
hsq04261
Adrenergic signaling in cardiomyocytes
Brite
KEGG Orthology (KO) [BR:
hsq00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04081 Hormone signaling
130285117 (RAPGEF4)
09150 Organismal Systems
09153 Circulatory system
04261 Adrenergic signaling in cardiomyocytes
130285117 (RAPGEF4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
hsq04131
]
130285117 (RAPGEF4)
Membrane trafficking [BR:
hsq04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Rab associated proteins
130285117 (RAPGEF4)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RasGEF
cNMP_binding
DEP
RasGEF_N
RA_2
nSTAND_NTPase4
Motif
Other DBs
NCBI-GeneID:
130285117
NCBI-ProteinID:
XP_056392305
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All DBs
Position
8:55020740..55488506
Genome browser
AA seq
1032 aa
AA seq
DB search
MVAAHASHSSSSAEWIACLDKRPLERSGEDVDIIFARLKEVKAFERFHPNLLQQICFCGY
YESLEKGVTLYRQGDIGTSWYAVLTGSLDVKVTETNSHQDAVIICTLGVGTAFGESILDN
TPRHATIVTREYSELLRIEQKDFKALWEKFRQYMAGFLAPPYGVLETGSNDRISDKENMN
SGMCSGSKNCNKTPLIENQNTLRPAKTITEVMGCREVAKVPSERILRAGKTLRNAILSRA
PHMIRDRKYHLKTYRQCCVGTELVDWLMQQSSCVHSRTQAVGMWQVLLEEGVLNHVDQEY
YFQDKYLFYRFLDDEHEEVPMPTDEEKRDSEEDLQDTFLLLSQIGPDAHMRMILRKPPGQ
RTADDLEIIFEELIHIKALSHLSTTVKRELAGFLIFESHPKAGTVLFNQGEEGTSWYIIL
KGSVNVVIYGKGVVCTLHEGDDFGKLALVNDAPRAASIVLREDNCHFLRVDKEDFNRILR
DVEANTVRLKEHDQDVLVLEKIPSGQQPSAQVNTQSPYKYTVMSGNPEKILEHFLETMRL
EPSMNESMDSALDDFIMMHCVFMPNVQLCPALMSHYHAQPSQGTEQEKMDYAINNKRRVI
RLVQLWANLYGDLLREDEVAMAFLEEFYVSVSDDTRTIASLKDQLPELERIVKQLSDDGK
GQKKHKVLLRQFSTGDERLQKRQPIRSTDEILFKVYCIDHTYTTIRVQVSASVKEVLSAV
ADKLGSGESLILVKISSAGEKVVVKPNDVSVFTSLTVNGRLFACPRDQFDSLTPLQEQEG
PSTGTMSTFELMSSKDLAYQMTIHDWDLFNCVHELELIYHTFGRHNFKKTTANLDLFLRR
FNEIQFWVVTEISLCPQLSKRVQLLKKFIKIAAHCKEYKNLNSFFAIVMGLSNVAVSRLS
LTWEKLPSKFKKIYAEFENLMDPSRNHRAYRLTIAKLEPPIIPFTPLLIKDMTFTHEGNK
TFIDHLINFEKMRMIANTVRTMRFCRSMPFSPEASLVSKNHQDVRNYVRQFNVIDNQRTL
SQMSHRLEPRRT
NT seq
3099 nt
NT seq
+upstream
nt +downstream
nt
atggttgctgcacacgcttcccattcttcctcttctgcagagtggattgcctgtctagat
aaaaggccactggaacgttccggagaagatgtagacatcatatttgcacgtcttaaagaa
gtgaaggctttcgagagattccatccaaatttactgcagcagatctgcttctgtggctat
tatgagagcttggagaagggggttacgttgtatcgccaaggtgacattgggacgagttgg
tatgcggtgcttacaggatccttggatgtcaaagtgaccgagacaaacagccatcaggat
gcagtcatcatatgcacgctgggagtcggaaccgcttttggagagtcaatactggataac
acaccccgccatgccaccattgttaccagggaatacagcgagctcttacggattgaacag
aaggactttaaggcactgtgggagaaatttcgacagtacatggctggttttttggctcct
ccatacggcgttcttgagaccggctctaatgacaggatatctgacaaagaaaacatgaac
agcggcatgtgctcgggatcgaaaaactgtaacaagaccccactcattgaaaatcaaaac
acgcttcgtccagctaaaaccattacagaggtaatgggatgtcgggaagtggctaaggtc
ccttctgaacggatcctcagggctgggaagactttacgcaatgctatcctttcccgtgca
cctcacatgatcagagatcgtaaataccatctcaaaacatacaggcagtgttgtgtagga
actgaactggtggactggctgatgcagcaaagctcatgtgttcactcccggacgcaagcg
gtgggcatgtggcaggtcctactggaggagggagttcttaaccacgttgaccaggaatac
tacttccaagacaaatacttgttctatcgtttccttgacgatgaacatgaagaagtgcct
atgccgaccgatgaagagaaaagggatagtgaggaagacctccaggatacttttctactc
ttgtctcaaataggacctgatgcacacatgagaatgatcctcagaaaaccgcccggccag
cggacggcagatgatctagaaattattttcgaagaacttattcacattaaagccttatct
catctctccaccacggttaaaagggaactggccggatttttaatctttgaatctcaccca
aaggcgggaacagtgttgtttaatcaaggagaagaagggacgtcctggtatatcatctta
aagggatcagtaaatgtcgtcatctatgggaagggtgtggtttgtactttacatgaagga
gatgactttggcaagttggcattagtaaatgatgccccccgggcggcatcaattgtcctg
cgagaagacaactgccactttctaagggtggacaaagaggacttcaacagaatcctgcgt
gacgttgaagcaaatactgtgaggttaaaggaacatgatcaggatgtcttggtgttggag
aagatcccatctggccaacaaccgtcagctcaagtaaacacgcagtcaccatataagtac
acggtgatgtccgggaatccagagaaaattttggaacactttttagaaacaatgcgactg
gagcctagcatgaatgaatcgatggattcggctttagatgacttcattatgatgcattgt
gtgttcatgcccaatgttcagctctgcccggccttgatgtctcattaccatgcccaacct
tcccaagggacggagcaggagaaaatggattatgccatcaataacaaacgtagagtcatc
cgattggtacaactttgggccaacttgtacggtgacctactgcgggaggatgaggtcgcc
atggctttcttagaggaattttacgtctcagtatcagatgatacaagaacgattgcttct
ctgaaggatcaacttcctgagctggagagaatagtgaagcagttgtcagatgatgggaaa
ggacaaaaaaaacacaaagtgcttttacgacagttcagtactggggatgagagactgcaa
aagcgtcagcccataagaagcacagatgaaattcttttcaaggtgtactgcatcgatcac
acatacaccaccatacgcgtacaagtgtctgcctcggtgaaggaagtgctgtctgccgtg
gcggataaactgggctccggagaaagcctgatacttgtaaagatcagttctgcgggagag
aaagttgttgtcaagccaaatgacgtatctgtgtttacatctctcactgtgaatggacgg
ctctttgcttgtcctcgagatcagtttgattcgttgacaccacttcaggaacaggagggc
ccatctaccggtactatgtcaacatttgaacttatgagctcgaaagacttagcttaccag
atgacaatccatgactgggatctcttcaactgtgttcatgagctggagctcatctatcac
acctttggacggcacaattttaaaaagacaacagccaatttggacctcttcctgagacgt
ttcaatgaaatccaattctgggttgtgacagaaatttccctgtgccctcagctcagcaag
agggtgcaactgctgaagaaatttattaaaattgcagcccattgcaaggaatacaaaaat
ctaaactctttcttcgccattgttatgggactgagcaatgtagcggtgagtcgactgtca
ttaacatgggagaaacttccaagcaagttcaagaagatctatgcagaatttgaaaattta
atggacccatctcgaaatcaccgagcttacaggctgaccatagctaagctggaaccacca
atcattcctttcacacctttactgattaaggacatgactttcacccatgaggggaataaa
acttttatcgaccatctgataaactttgaaaaaatgcgcatgattgcaaatacagtaaga
acaatgagattctgccggagcatgcccttcagtccagaggcttcgcttgtcagtaaaaat
caccaggatgttcggaattacgtgcggcagttcaacgtgattgacaatcagaggacgcta
tctcaaatgtcacatcgcctagaaccacggcgcacttga
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integrated database retrieval system
