Hyla sarda (Sardinian treefrog): 130295128
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Entry
130295128 CDS
T11475
Symbol
TRAF3
Name
(RefSeq) TNF receptor-associated factor 3 isoform X1
KO
K03174
TNF receptor-associated factor 3
Organism
hsq Hyla sarda (Sardinian treefrog)
Pathway
hsq04620
Toll-like receptor signaling pathway
hsq04621
NOD-like receptor signaling pathway
hsq04622
RIG-I-like receptor signaling pathway
hsq05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
hsq00001
]
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
130295128 (TRAF3)
04621 NOD-like receptor signaling pathway
130295128 (TRAF3)
04622 RIG-I-like receptor signaling pathway
130295128 (TRAF3)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
130295128 (TRAF3)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TRAF-mep_MATH
MATH_2
zf-TRAF
TRAF3_RING
CCDC18_1st
ATG16
zf-C3HC4
CCDC39
NOCA1_mid
ADIP
CCDC18_2nd
Cast
CEP104_ZnF
Sina_ZnF
MMR_HSR1_Xtn
SPATA24
DUF3450
CC4_CEP85
Motif
Other DBs
NCBI-GeneID:
130295128
NCBI-ProteinID:
XP_056401458
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All DBs
Position
11:complement(12253954..12382134)
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AA seq
578 aa
AA seq
DB search
MNTVPTVRYGGEFSCYIMDASKRIEPQTLQQRANPDRSLATTIYVPEQGGYKEKFLKQVE
EKYKCEKCRLVLCNPRQTECGHRYCETCMNSLLSSPTPQCLSCEEIIIKDKVFKDNCCRR
EVLALQMYCRNESRGCKEQITLGTLLIHLKSDCQFEELACPRADCKERVIRKDLSDHIEK
TCKYRETPCQYCKNQVPLVEMQKHEDMDCPSVVVSCPHKCSVKSLLRSELNAHLLECVNA
PSTCSFKRYGCSFKGTNQQIKAHEASSAVQHVNLMKEWSSFLETKVSKLQNESSEKNKSI
QILHNQMCNFEVEIERHKDLLRNNETKILHLQKVIEGQADKLKDLDKEIRSLRQTGDDEE
SVKSTIDAFKARLVQLETLSKTAVAWNPGVLETQINRHDQMLSVHDIRLADMDLRFQVLE
TASYNGVLIWKIRDYKRRKQEAVMGKTLSLYSQPFYTGYFGYKMCARVYLNGDGMGKNTH
LSLFFVIMRGEYDALLPWPFKQKVSLMLMDQGPSRRHLGDAFKPDPNSSSFKKPTGEMNI
ASGCPVFVAQSVLENGTYIKDDTIFIKVIVDTSDLPDP
NT seq
1737 nt
NT seq
+upstream
nt +downstream
nt
atgaacacagtacctacagtgagatatggtggagaatttagctgttatatcatggatgcc
agcaaacggatcgaaccacaaacactacagcagagagccaatcccgaccgcagtctcgcc
accaccatctacgtgccagagcaaggagggtacaaggaaaagtttctgaaacaggtggaa
gagaagtacaagtgcgagaagtgcaggctggtcttgtgtaaccctcggcagacagaatgc
ggacaccgctattgtgagacctgcatgaactccttgttaagctcccccaccccacaatgt
ctgtcttgtgaagaaattattattaaagataaggtgtttaaggataactgctgccggaga
gaggtgctcgcacttcagatgtactgcaggaatgagagccgaggctgcaaggagcaaata
acactaggcactttattgattcacttaaaaagtgattgtcagttcgaggaactcgcctgt
ccccgtgcggactgcaaggaaagagtcatccgcaaggatctcagtgaccacatagagaag
acatgcaagtaccgagaaacgccctgtcagtactgcaaaaaccaagtaccgctggtagaa
atgcagaagcatgaagatatggattgcccgtcggtcgtggtgtcctgccctcataagtgt
agcgtaaaaagtttattgagaagtgagttgaatgctcatttattagaatgtgtgaatgcc
ccaagtacctgtagttttaaacgttatggctgcagttttaagggaacaaaccagcaaatt
aaagcacatgaagccagctctgctgttcagcatgtcaacttaatgaaagaatggagcagt
tttttggaaaccaaggtgtcgaagttacaaaacgaaagctctgaaaagaataaaagtatc
cagatattgcacaaccagatgtgtaactttgaagtggaaattgaaagacataaagatttg
ttacgaaacaatgaaacaaaaattctccatttacagaaggtgattgaaggccaagcagac
aagctgaaggatttggacaaggaaattcggagtttgcggcagacgggagatgacgaagaa
agcgtgaaaagcaccattgatgcctttaaggctcgtttagtgcaattggaaactctcagt
aaaactgcagtcgcgtggaaccctggtgtcttggagactcaaatcaacagacacgatcag
atgctgagcgttcacgacatccgtctggctgatatggacctccggttccaagtactggag
acggcaagttacaatggcgtcctgatctggaagatccgagattacaagaggcggaagcag
gaggctgttatggggaagacgttgtctttgtacagccagcccttttacactggatacttt
ggatataaaatgtgcgcaagggtctatctcaacggggacggcatggggaagaacacgcac
ttgtccctgttctttgtcatcatgaggggagagtacgatgctctgctgccttggcctttc
aaacaaaaagtcagccttatgctcatggaccagggaccatccagacggcatttaggggac
gccttcaagccggacccgaacagcagtagcttcaaaaaacccaccggggaaatgaacatt
gcctccggatgccccgtattcgtcgcccagtccgtcttagagaatgggacgtacattaaa
gatgatactatttttattaaagtcatagttgatacctcggacctgccagacccctga
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