Harpegnathos saltator (Jerdon's jumping ant): 105187190
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Entry
105187190 CDS
T03918
Name
(RefSeq) TAR DNA-binding protein 43 isoform X1
KO
K23600
TAR DNA-binding protein 43
Organism
hst
Harpegnathos saltator (Jerdon's jumping ant)
Pathway
hst03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
hst00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
105187190
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hst03019
]
105187190
Messenger RNA biogenesis [BR:
hst03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Negative regulators of mRNA 3' end processing
105187190
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TDP-43_N
RRM_1
RRM_7
Motif
Other DBs
NCBI-GeneID:
105187190
NCBI-ProteinID:
XP_019698741
LinkDB
All DBs
Position
Unknown
AA seq
515 aa
AA seq
DB search
MSSYIQVAEDEGEEPIELPTEDDTTLLLTTLSAQFPGTCGLKYRNPESRTMRGVRLVDGR
LHPPENGWGKAIYFCVFPKENKRKSDDNLENSTAKTKRMETKLRCTDLIVLGLPWKTTEQ
NLREYFEQFGEVLMAQVKKDAKSGQSKGFGFIRFGSYESQLRCLAQRHMIDGRWCDVKVP
NSKNIDGLMMARQYDTGKHNECYRPIPVHTPSSRRVPASKPYTNVNSSSEANAPSSAPRY
DSEYDYKTTHYPSYPPNYPYDDNKYKYEGGGGGGGGGGGGGGGSSGGGGGGSGSGGGGGG
NSNQTAYVYEKPNYTAYEEPAAASYDARGYMAPHTAAVTPNSAPYPPSDADYPRYAGYDT
RAAAYPVAENPEQYSDKGRYNYGYEQRGYYETDGRYASTADCRYTMEVRYPDARHPDNRH
IPIDARTEADCRYVDSRDMDRRYVDVREADGGRYAVMESREVDNRGYAAGPDGREVVDGR
FADPTRYPVKENYYDRYYKHRPSRDHHVHADASRY
NT seq
1548 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtcatacatccaggtcgccgaagatgaaggcgaggagcctatcgagctgcccact
gaagatgacaccacactcttactcactactctgtctgcccaatttcccggtacctgcggc
ctcaaatatcggaacccggagtctcgtacaatgcgcggagttcggttggttgatggacgc
ctacacccgcctgagaatggctggggcaaagccatatacttctgtgtattccccaaagag
aacaaacgtaaatctgatgacaatttggaaaattccacagctaagactaaaagaatggaa
acgaagttgcgttgcactgacttgattgtactcggtttgccatggaaaactacggaacag
aacttgcgcgagtatttcgaacaatttggtgaagttttaatggctcaggtaaagaaagat
gcaaaatccggacaaagcaaaggatttggctttattagatttggaagttatgaatcgcaa
ttaagatgcctggcccaacgtcatatgatagatggtagatggtgcgacgttaaggttccc
aacagtaagaatattgatggcttaatgatggcacgtcagtatgatacgggtaagcacaat
gagtgctaccgacctataccggtgcacactccaagtagtcgtcgggtgccggcgtcgaag
ccgtataccaacgtaaactcgtcgtccgaggccaatgcaccttctagcgcgcctagatac
gactcggagtacgattacaaaaccacacactacccgtcatatcctccgaattatccgtac
gatgataataagtacaagtacgaaggtggtggtggcggtggtggtggtggtggtggtggt
ggtggcggtagcagcggcggcggcggcggcggtagtggtagtggcggcggcggcggcggc
aacagcaatcagactgcatatgtctacgagaagccgaactacactgcctacgaggagcct
gccgctgcatcgtacgatgcacgcggttacatggcaccacacacggccgccgtgacgcct
aattccgcaccgtatcctccgtccgacgccgattatccaagatacgccggctatgataca
cgcgccgctgcttatcctgtcgccgaaaatccggaacaatattctgacaagggcaggtat
aattatggatacgaacaacgaggctactacgaaactgacggtcgttatgcgagcacggcg
gattgtcggtacaccatggaggtgcgttatccagacgcgagacatcctgacaacagacac
atcccgatcgatgcgcgaacggaagcggactgtagatacgtggacagccgcgatatggat
agacgatacgttgatgtcagagaagctgatggcggtaggtacgccgtaatggagagtcgc
gaggtcgacaaccgtggttacgccgccggaccggatggccgggaggtggtcgacggcaga
ttcgcggatccgacgcgatatccagttaaagaaaactattacgatcgctactacaaacac
cggccatcgagggatcatcacgtccacgcggacgcgtcaagatattga
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