Hymenobacter swuensis: Hsw_4238
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Entry
Hsw_4238 CDS
T03055
Name
(GenBank) isoleucyl-tRNA synthetase
KO
K01870
isoleucyl-tRNA synthetase [EC:
6.1.1.5
]
Organism
hsw
Hymenobacter swuensis
Pathway
hsw00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
hsw00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
Hsw_4238
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
hsw01007
]
Hsw_4238
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hsw03016
]
Hsw_4238
Enzymes [BR:
hsw01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.5 isoleucine---tRNA ligase
Hsw_4238
Amino acid related enzymes [BR:
hsw01007
]
Aminoacyl-tRNA synthetase
Class I (U)
Hsw_4238
Transfer RNA biogenesis [BR:
hsw03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
Hsw_4238
Prokaryotic type
Other AARSs
Hsw_4238
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1
DUF5915
Anticodon_1
tRNA-synt_1g
tRNA-synt_1e
Motif
Other DBs
NCBI-ProteinID:
AHJ99833
UniProt:
W8F4C9
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All DBs
Position
4820171..4823713
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AA seq
1180 aa
AA seq
DB search
MLRQAQHDVLIVTTTSKEMNYPEFKQPLNYGQVGTDILAWWKQNGIFEKSVSTREGQPTF
VFYEGPPSANGAPGIHHVMARTVKDIFCRYQTLLGKQVHRKGGWDTHGLPIELQVEKELG
ITKEDIGKKISIEDYNQRCRETVMRFKAQWDDLTEKMGYWVDLDDPYITFEPEYIESCWA
LLKKLYDKGLLYKGYTIQPYSPAAGTGLSSHELNQPGTYRDVKDTTVVAQFKVKRDEKSE
PLFGNVQLDEVPLAALYGDNASEPDVYILAWTTTPWTLPANTGLAVGKNIPYVLVSTFNP
YTYAPIRVVLAEALVGKYFSEKGKEASFEDFKPGDKVLPWRIENTFKGADLVGINYERLF
GQNKGYPAFEGEENAFRVINGDFVTTEDGTGIVHISPTFGADDFRAAQLAGVPALLVADD
EGKLGPIVDRTGRYVAQMGEFGGRWVKNYDGHDESDADYKTLDESIAIRMKGDGTAFKVE
KYEHTYPHCWRTDKPVLYYPLDSWFIKTTAVKDRLIELNKTINWQPASTGTGRFGNWLEN
LVDWNLSRSRYWGTPLPIWRTQDGSEEICIGSIEQLNAEIEKAVAAEVMTHNPYQLVDGN
WVMANGSTDQTAKIDLHRPYVDDIFLVSPSGQPMYRETDLIDVWFDSGAMPYAQWHYPIE
NEGQFQKNFPADFIAEGVDQTRGWFFTLHALAVMLEDSVAYKNVMANGLVLDKNGNKMSK
RLGNAVDPFATIQQFGPDATRWYMIANAQPWDNLKFDVAGITEVQRRFFGTLFNTYSFYA
LYANLDGFQAREFDRTPHAELSELDRWILSKLQSLILEVRGHYDSYDPTKAARAIQDFVT
DQLSNWHVRLSRRRFWKGELTADKRAAYETLQECLVVVSQLMAPIAPFFAEWLYQNMTNG
MRAEAIERNTPLAAESVHLTLLVEADEARIDKALEERMELAQRISSLTHSLRKKSVLKVR
QPLQRILVPVFNDSTRAQVALVEDLICAEVNVKHVEFLDDASGVLVKSVKPNFKRLGQQY
GAKLKAVGARIQQMSAEEISTLEKTGQLAVEIDGEAYTLAPDDVEIRTQDLPGWLVATDG
PLTVALDVTLTDELRQEGVARELVNRLQNLRKDSGLEVQDKIRVTLQQQPELEAAVQSFG
GYIREEVQALSLDFAPEISGGAVLEFDEFSVPVLLNVATA
NT seq
3543 nt
NT seq
+upstream
nt +downstream
nt
atgcttcggcaagctcagcatgacgtgctgatagttactactacaagcaaagaaatgaac
taccccgaattcaagcagccgctcaactacggccaggtcggcaccgatatcctggcgtgg
tggaagcagaacggcatctttgagaaaagcgtgagcacccgcgaagggcagcccacgttc
gtgttttacgagggcccgccttcggccaacggcgcccccggcatccaccacgtgatggcc
cggacggtgaaggacatcttctgccgctaccagacgctgctgggcaagcaggtgcaccgc
aaaggcggctgggacacccatggcctgcctatcgagctgcaggtggaaaaggagctgggt
atcaccaaggaagatatcggcaagaaaatcagcatcgaggactacaaccagcgctgccgg
gagactgtcatgcgcttcaaggcccagtgggacgacctcaccgagaaaatgggctactgg
gtggacctcgacgacccctatatcaccttcgagcccgagtacatcgagagctgctgggcg
ctgctcaagaagctctacgacaagggcctgctctacaaaggctacaccatccagccctac
tccccggccgccggcaccggcctgtcgtcgcacgagctcaaccagcccggcacctaccgc
gacgtgaaggacacgacggtggtggcccagttcaaggtgaagcgcgacgagaagtcggag
ccgttgtttggcaacgtgcagctcgatgaagtgccgttggctgccctctacggcgacaat
gcctcggagccggacgtgtacatcttggcctggacgactacgccctggaccctgcccgcc
aacaccgggctggctgtgggcaagaacatcccgtacgtgctggtgagcaccttcaacccc
tacacctacgcgcccatccgggtggtgctggcggaggcgctggtgggcaaatacttctcg
gagaagggcaaagaagcttcgtttgaggacttcaagcccggtgacaaagtgctgccctgg
cgcatcgaaaacaccttcaaaggcgccgacctcgtgggcatcaactacgagcggctgttc
ggccagaacaaaggctatccggcgtttgagggcgaggaaaacgccttccgcgtcatcaac
ggcgacttcgtaaccaccgaggatggtaccggcatcgtgcacatctcgcccacgtttggt
gccgatgacttccgggctgcccaactggccggcgtgcccgccctgctggtagccgacgac
gaaggcaagctcggccccatcgtggaccgcacgggccgctacgtggcccagatgggcgaa
ttcggcggccgttgggtgaaaaactacgacggccacgatgagtcggacgccgactataag
actcttgacgaaagcattgccatccgcatgaaaggcgacggcacggccttcaaagtggag
aagtacgagcacacctacccgcactgctggcgcaccgacaagcccgtgctctattacccg
ctcgactcctggtttatcaaaaccacggcggtgaaagaccggctcatcgagctcaacaaa
accatcaactggcagcccgccagcaccggcaccggccgcttcggcaactggctggaaaac
ctggtggactggaacctgagccgctcgcgctactggggcacgcccctgcccatctggcgc
acccaggacggctcggaggaaatctgcatcggctcaatcgagcagctgaacgccgaaatc
gagaaggccgtcgccgccgaagtcatgacccacaacccctaccagctggtggacggcaac
tgggtgatggccaacggctcgacggaccaaaccgccaaaatcgacctgcaccggccctac
gtggacgacatcttcctggtgtcgccctcgggccagcccatgtaccgcgaaaccgacctc
atcgacgtgtggttcgacagcggtgccatgccctacgcccagtggcactatccgattgaa
aacgaagggcagttccagaagaacttccccgccgatttcattgccgaaggcgtggaccag
acccgcggctggttcttcaccctgcacgcgctggccgtgatgctggaagactcggtggcc
tacaaaaacgtgatggccaacggcttggtattggacaagaacggtaacaagatgagcaag
cgcctcggcaacgccgtggacccgtttgccaccatccagcagttcggccccgacgccacg
cgctggtacatgattgccaacgcccagccctgggacaacctcaagttcgacgtggccggt
atcacggaggtgcagcgccgcttctttggcacgctcttcaacacctactcgttctacgcc
ctctacgccaacctcgacggcttccaggcccgggagtttgaccgcacgccgcacgccgag
ctaagcgagctggaccgctggattctgagcaagctccagtcgctgattctggaagtgcgc
ggccactacgatagctacgaccccacgaaggccgcccgcgccatccaggatttcgtgacc
gaccagctctccaactggcacgtgcgcctctcgcgccgccgcttctggaagggcgagctg
accgccgacaagcgcgccgcctacgaaaccctgcaggaatgcctggtggtagtgtcgcag
ctcatggccccgattgcgcccttcttcgccgagtggctctaccaaaacatgaccaacggc
atgcgcgccgaagccatcgagcgcaacaccccgctggccgccgaatcggtgcacctgact
ttgctggtggaggccgacgaagcccgcatcgacaaggcgctggaggagcggatggagctg
gctcagcgcatttcttcgctcacgcactcgctccgcaagaagtcggtgctgaaggtgcgg
cagccgctgcagcgcatcctggtgccggtattcaacgattccacccgcgcccaggtggcc
ttggtggaagatctgatctgcgccgaggtgaacgtgaagcacgtagagttcctcgatgat
gccagcggcgtgctggtgaagtcggtgaagcccaacttcaagcgcctaggccagcagtac
ggcgccaagctgaaagccgtgggtgcccgcatccagcagatgagcgccgaggaaatcagc
accctcgaaaaaaccggtcagctggccgtggaaatcgacggcgaagcctacaccctggcc
cccgatgacgtggaaatccgcacccaagacctgcccggctggctggtggccaccgatggc
cccctcaccgtggcccttgacgtgaccctgaccgacgagttgcgccaggaaggcgtggcc
cgcgagctggtgaaccgcctccagaacctgcgcaaagacagcggcctggaagtgcaggac
aaaatccgggtgacgctgcagcagcagcccgagctggaagccgccgtgcagtcgttcggc
ggttacatccgtgaggaagtgcaggccctgagcctggatttcgccccggaaatcagcggc
ggcgcggtgctggaattcgatgagttttccgtgccggtgctgctgaacgtagcaactgcc
taa
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